RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 TRAK1Q9UPV9 953 aa13.2□□□□□ -0.3
C11orf54-201ENST00000331239 HSPA2P54652 639 aa13.19□□□□□ -0.3
C11orf54-201ENST00000331239 POGKQ9P215 609 aa13.19□□□□□ -0.3
C11orf54-201ENST00000331239 NINLQ9Y2I6 1382 aa13.19□□□□□ -0.3
C11orf54-201ENST00000331239 EVC2Q86UK5 1308 aa13.18□□□□□ -0.3
C11orf54-201ENST00000331239 ROBO2Q9HCK4 1378 aa13.17□□□□□ -0.3
C11orf54-201ENST00000331239 PRAM1Q96QH2 718 aa13.17□□□□□ -0.3
C11orf54-201ENST00000331239 CCDC7Q96M83 1385 aa13.16□□□□□ -0.3
C11orf54-201ENST00000331239 STK26Q9P289 416 aa13.16□□□□□ -0.3
C11orf54-201ENST00000331239 DCCP43146 1447 aa13.15□□□□□ -0.3
C11orf54-201ENST00000331239 CDC42BPGQ6DT37 1551 aa13.15□□□□□ -0.3
C11orf54-201ENST00000331239 ATAD2Q6PL18 1390 aa13.14□□□□□ -0.31
C11orf54-201ENST00000331239 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.13□□□□□ -0.31
C11orf54-201ENST00000331239 ANKARQ7Z5J8 1434 aa13.13□□□□□ -0.31
C11orf54-201ENST00000331239 ADGRL3Q9HAR2 1447 aa13.13□□□□□ -0.31
C11orf54-201ENST00000331239 TULP4Q9NRJ4 1543 aa13.13□□□□□ -0.31
C11orf54-201ENST00000331239 STRCP1A6NGW2 1772 aa13.12□□□□□ -0.31
C11orf54-201ENST00000331239 KIF7Q2M1P5 1343 aa13.12□□□□□ -0.31
C11orf54-201ENST00000331239 WASHC2AQ641Q2 1341 aa13.11□□□□□ -0.31
C11orf54-201ENST00000331239 WASLO00401 505 aaPredicted RBP13.11□□□□□ -0.31
C11orf54-201ENST00000331239 DISP3Q9P2K9 1392 aa13.11□□□□□ -0.31
C11orf54-201ENST00000331239 PLEKHH1Q9ULM0 1364 aa13.1□□□□□ -0.31
C11orf54-201ENST00000331239 ITSN1Q15811 1721 aa13.1□□□□□ -0.31
C11orf54-201ENST00000331239 WAPLQ7Z5K2 1190 aa13.1□□□□□ -0.31
C11orf54-201ENST00000331239 FMN2Q9NZ56 1722 aa13.1□□□□□ -0.31
C11orf54-201ENST00000331239 PROSER2Q86WR7 435 aaPredicted RBP13.09□□□□□ -0.31
C11orf54-201ENST00000331239 IQSEC2Q5JU85 1478 aa13.09□□□□□ -0.31
C11orf54-201ENST00000331239 PRKCSHP14314 528 aaPredicted RBP13.09□□□□□ -0.31
C11orf54-201ENST00000331239 C19orf44Q9H6X5 657 aa13.09□□□□□ -0.31
C11orf54-201ENST00000331239 NALCNQ8IZF0 1738 aa13.09□□□□□ -0.31
C11orf54-201ENST00000331239 LRRC7Q96NW7 1537 aa13.08□□□□□ -0.32
C11orf54-201ENST00000331239 CDK19Q9BWU1 502 aa13.08□□□□□ -0.32
C11orf54-201ENST00000331239 BRD4O60885 1362 aaPredicted RBP13.08□□□□□ -0.32
C11orf54-201ENST00000331239 C11orf95C9JLR9 678 aaPredicted RBP13.07□□□□□ -0.32
C11orf54-201ENST00000331239 TOPAZ1Q8N9V7 1692 aa13.07□□□□□ -0.32
C11orf54-201ENST00000331239 ATP7BP35670 1465 aa13.07□□□□□ -0.32
C11orf54-201ENST00000331239 MINK1Q8N4C8 1332 aaPredicted RBP13.07□□□□□ -0.32
C11orf54-201ENST00000331239 MYOM1P52179 1685 aa13.06□□□□□ -0.32
C11orf54-201ENST00000331239 XIRP1Q702N8 1843 aaKnown RBP13.06□□□□□ -0.32
C11orf54-201ENST00000331239 LTBP4Q8N2S1 1624 aa13.06□□□□□ -0.32
C11orf54-201ENST00000331239 TMEM94Q12767 1356 aa13.05□□□□□ -0.32
C11orf54-201ENST00000331239 CCDC61Q9Y6R9 512 aa13.05□□□□□ -0.32
C11orf54-201ENST00000331239 HIRIP3Q9BW71 556 aaPredicted RBP13.05□□□□□ -0.32
C11orf54-201ENST00000331239 MSH6P52701 1360 aa13.04□□□□□ -0.32
C11orf54-201ENST00000331239 NPC1L1Q9UHC9 1359 aa13.04□□□□□ -0.32
C11orf54-201ENST00000331239 PLEKHG3A1L390 1219 aa13.04□□□□□ -0.32
C11orf54-201ENST00000331239 SRPK2P78362 688 aaKnown RBP13.04□□□□□ -0.32
C11orf54-201ENST00000331239 CADPS2Q86UW7 1296 aa13.04□□□□□ -0.32
C11orf54-201ENST00000331239 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
C11orf54-201ENST00000331239 KTN1Q86UP2 1357 aaKnown RBP13.04□□□□□ -0.32
C11orf54-201ENST00000331239 USP32Q8NFA0 1604 aa13.03□□□□□ -0.32
C11orf54-201ENST00000331239 SENP3Q9H4L4 574 aaPredicted RBP13.03□□□□□ -0.32
C11orf54-201ENST00000331239 TERF2IPQ9NYB0 399 aa13.03□□□□□ -0.32
C11orf54-201ENST00000331239 ANKRD36BQ8N2N9 1353 aa13.03□□□□□ -0.32
C11orf54-201ENST00000331239 NUDT16Q96DE0 195 aaKnown RBP13.03□□□□□ -0.32
C11orf54-201ENST00000331239 KIF1AQ12756 1690 aa13.03□□□□□ -0.32
C11orf54-201ENST00000331239 ZNF335Q9H4Z2 1342 aaPredicted RBP13.02□□□□□ -0.32
C11orf54-201ENST00000331239 SAFB2Q14151 953 aaKnown RBP eCLIP13.02□□□□□ -0.33
C11orf54-201ENST00000331239 AKAP12Q02952 1782 aa13.01□□□□□ -0.33
C11orf54-201ENST00000331239 CPSF1Q10570 1443 aaKnown RBP13□□□□□ -0.33
C11orf54-201ENST00000331239 POLR3AO14802 1390 aaPredicted RBP13□□□□□ -0.33
C11orf54-201ENST00000331239 ATF3P18847 181 aa13□□□□□ -0.33
C11orf54-201ENST00000331239 CABP2Q9NPB3 220 aa13□□□□□ -0.33
C11orf54-201ENST00000331239 HDGFL2Q7Z4V5 671 aaPredicted RBP13□□□□□ -0.33
C11orf54-201ENST00000331239 PPIP5K1Q6PFW1 1433 aa12.99□□□□□ -0.33
C11orf54-201ENST00000331239 NSD2O96028 1365 aa12.99□□□□□ -0.33
C11orf54-201ENST00000331239 C14orf37Q86TY3 774 aa12.99□□□□□ -0.33
C11orf54-201ENST00000331239 MON2Q7Z3U7 1717 aa12.99□□□□□ -0.33
C11orf54-201ENST00000331239 DDX10Q13206 875 aaKnown RBP12.98□□□□□ -0.33
C11orf54-201ENST00000331239 PER1O15534 1290 aaPredicted RBP12.98□□□□□ -0.33
C11orf54-201ENST00000331239 C1orf167Q5SNV9 1468 aa12.98□□□□□ -0.33
C11orf54-201ENST00000331239 MST1RQ04912 1400 aa12.98□□□□□ -0.33
C11orf54-201ENST00000331239 PRR36Q9H6K5 1346 aa12.97□□□□□ -0.33
C11orf54-201ENST00000331239 CD163L1Q9NR16 1453 aa12.97□□□□□ -0.33
C11orf54-201ENST00000331239 PANK3Q9H999 370 aa12.97□□□□□ -0.33
C11orf54-201ENST00000331239 EDC4Q6P2E9 1401 aaKnown RBP12.97□□□□□ -0.33
C11orf54-201ENST00000331239 CABP1Q9NZU7 370 aa12.96□□□□□ -0.34
C11orf54-201ENST00000331239 KNSTRNQ9Y448 316 aa12.96□□□□□ -0.34
C11orf54-201ENST00000331239 RGPD8O14715 1765 aaPredicted RBP12.96□□□□□ -0.34
C11orf54-201ENST00000331239 CGNL1Q0VF96 1302 aa12.95□□□□□ -0.34
C11orf54-201ENST00000331239 SLC12A5Q9H2X9 1139 aa12.95□□□□□ -0.34
C11orf54-201ENST00000331239 TMC1Q8TDI8 760 aa12.95□□□□□ -0.34
C11orf54-201ENST00000331239 TTC21AQ8NDW8 1320 aa12.94□□□□□ -0.34
C11orf54-201ENST00000331239 PHF8Q9UPP1 1060 aa12.94□□□□□ -0.34
C11orf54-201ENST00000331239 USP54Q70EL1 1684 aa12.94□□□□□ -0.34
C11orf54-201ENST00000331239 A0A1W2PP64 1363 aa12.94□□□□□ -0.34
C11orf54-201ENST00000331239 RALBP1Q15311 655 aa12.94□□□□□ -0.34
C11orf54-201ENST00000331239 POLR3GLQ9BT43 218 aa12.93□□□□□ -0.34
C11orf54-201ENST00000331239 SSH2Q76I76 1423 aa12.93□□□□□ -0.34
C11orf54-201ENST00000331239 NRKQ7Z2Y5 1582 aa12.93□□□□□ -0.34
C11orf54-201ENST00000331239 ANKRD26Q9UPS8 1709 aa12.93□□□□□ -0.34
C11orf54-201ENST00000331239 USP6P35125 1406 aa12.92□□□□□ -0.34
C11orf54-201ENST00000331239 SLAIN2Q9P270 581 aa12.92□□□□□ -0.34
C11orf54-201ENST00000331239 ACEP12821 1306 aa12.92□□□□□ -0.34
C11orf54-201ENST00000331239 KIF20BQ96Q89 1820 aa12.91□□□□□ -0.34
C11orf54-201ENST00000331239 ANP32CO43423 234 aa12.91□□□□□ -0.34
C11orf54-201ENST00000331239 AMER1Q5JTC6 1135 aaPredicted RBP12.91□□□□□ -0.34
C11orf54-201ENST00000331239 CARD14Q9BXL6 1004 aa12.91□□□□□ -0.34
C11orf54-201ENST00000331239 SBNO1A3KN83 1393 aa12.9□□□□□ -0.34
C11orf54-201ENST00000331239 NSD3Q9BZ95 1437 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 265.4 ms