RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 VWDEQ8N2E2 1590 aa18.16■□□□□ 0.5
ATP2C1-201ENST00000328560 RUNDC1Q96C34 613 aa18.15■□□□□ 0.5
ATP2C1-201ENST00000328560 CFAP53Q96M91 514 aa18.15■□□□□ 0.5
ATP2C1-201ENST00000328560 NPATQ14207 1427 aa18.14■□□□□ 0.5
ATP2C1-201ENST00000328560 CGNL1Q0VF96 1302 aa18.14■□□□□ 0.49
ATP2C1-201ENST00000328560 C8orf34Q49A92 452 aa18.14■□□□□ 0.49
ATP2C1-201ENST00000328560 EFCAB6Q5THR3 1501 aa18.14■□□□□ 0.49
ATP2C1-201ENST00000328560 MROH1Q8NDA8 1641 aa18.13■□□□□ 0.49
ATP2C1-201ENST00000328560 PPM1GO15355 546 aaPredicted RBP18.13■□□□□ 0.49
ATP2C1-201ENST00000328560 SRPK2P78362 688 aaKnown RBP18.13■□□□□ 0.49
ATP2C1-201ENST00000328560 TNNQ9UQP3 1299 aa18.13■□□□□ 0.49
ATP2C1-201ENST00000328560 U2SURPO15042 1029 aaKnown RBP18.12■□□□□ 0.49
ATP2C1-201ENST00000328560 POLR3AO14802 1390 aaPredicted RBP18.12■□□□□ 0.49
ATP2C1-201ENST00000328560 KIF1BO60333 1816 aa18.12■□□□□ 0.49
ATP2C1-201ENST00000328560 RPGRIP1LQ68CZ1 1315 aa18.11■□□□□ 0.49
ATP2C1-201ENST00000328560 PPRC1Q5VV67 1664 aaKnown RBP18.11■□□□□ 0.49
ATP2C1-201ENST00000328560 POGZQ7Z3K3 1410 aa18.11■□□□□ 0.49
ATP2C1-201ENST00000328560 EVC2Q86UK5 1308 aa18.11■□□□□ 0.49
ATP2C1-201ENST00000328560 NGEFQ8N5V2 710 aa18.1■□□□□ 0.49
ATP2C1-201ENST00000328560 PDE3AQ14432 1141 aa18.09■□□□□ 0.49
ATP2C1-201ENST00000328560 KIDINS220Q9ULH0 1771 aa18.09■□□□□ 0.49
ATP2C1-201ENST00000328560 GGNBP2Q9H3C7 697 aa18.09■□□□□ 0.49
ATP2C1-201ENST00000328560 MROH2AA6NES4 1674 aa18.09■□□□□ 0.49
ATP2C1-201ENST00000328560 SBNO2Q9Y2G9 1366 aa18.08■□□□□ 0.49
ATP2C1-201ENST00000328560 RARSP54136 660 aaKnown RBP18.08■□□□□ 0.48
ATP2C1-201ENST00000328560 IDI1Q13907 227 aa18.08■□□□□ 0.48
ATP2C1-201ENST00000328560 MINK1Q8N4C8 1332 aaPredicted RBP18.07■□□□□ 0.48
ATP2C1-201ENST00000328560 KIAA1210Q9ULL0 1709 aa18.07■□□□□ 0.48
ATP2C1-201ENST00000328560 RLBP1P12271 317 aa18.06■□□□□ 0.48
ATP2C1-201ENST00000328560 POGKQ9P215 609 aa18.06■□□□□ 0.48
ATP2C1-201ENST00000328560 MLH3Q9UHC1 1453 aa18.06■□□□□ 0.48
ATP2C1-201ENST00000328560 FAM69CQ0P6D2 419 aa18.05■□□□□ 0.48
ATP2C1-201ENST00000328560 TSR2Q969E8 191 aaKnown RBP18.05■□□□□ 0.48
ATP2C1-201ENST00000328560 SLC52A1Q9NWF4 448 aa18.04■□□□□ 0.48
ATP2C1-201ENST00000328560 ADGRB3O60242 1522 aa18.03■□□□□ 0.48
ATP2C1-201ENST00000328560 NRXN1Q9ULB1 1477 aa18.03■□□□□ 0.48
ATP2C1-201ENST00000328560 NFKBIBQ15653 356 aa18.03■□□□□ 0.48
ATP2C1-201ENST00000328560 USP35Q9P2H5 1018 aa18.03■□□□□ 0.48
ATP2C1-201ENST00000328560 PCDHB15Q9Y5E8 787 aa18.02■□□□□ 0.48
ATP2C1-201ENST00000328560 WDR63Q8IWG1 891 aa18.02■□□□□ 0.48
ATP2C1-201ENST00000328560 MYH16Q9H6N6 1097 aa18.02■□□□□ 0.48
ATP2C1-201ENST00000328560 ESF1Q9H501 851 aaKnown RBP18.02■□□□□ 0.47
ATP2C1-201ENST00000328560 FTSJ3Q8IY81 847 aaKnown RBP18.01■□□□□ 0.47
ATP2C1-201ENST00000328560 SEC24BO95487 1268 aa18.01■□□□□ 0.47
ATP2C1-201ENST00000328560 MLECQ14165 292 aa18.01■□□□□ 0.47
ATP2C1-201ENST00000328560 CFAP74Q9C0B2 1584 aa18.01■□□□□ 0.47
ATP2C1-201ENST00000328560 PRAM1Q96QH2 718 aa18■□□□□ 0.47
ATP2C1-201ENST00000328560 NEO1Q92859 1461 aa18■□□□□ 0.47
ATP2C1-201ENST00000328560 LMTK2Q8IWU2 1503 aa17.99■□□□□ 0.47
ATP2C1-201ENST00000328560 NEURL4Q96JN8 1562 aa17.99■□□□□ 0.47
ATP2C1-201ENST00000328560 MAPK8IP3Q9UPT6 1336 aa17.99■□□□□ 0.47
ATP2C1-201ENST00000328560 FBXO31Q5XUX0 539 aaPredicted RBP17.98■□□□□ 0.47
ATP2C1-201ENST00000328560 SMC4Q9NTJ3 1288 aa17.98■□□□□ 0.47
ATP2C1-201ENST00000328560 HECW2Q9P2P5 1572 aa17.98■□□□□ 0.47
ATP2C1-201ENST00000328560 ANKRD36BQ8N2N9 1353 aa17.98■□□□□ 0.47
ATP2C1-201ENST00000328560 PMFBP1Q8TBY8 1022 aa17.98■□□□□ 0.47
ATP2C1-201ENST00000328560 ADGRB1O14514 1584 aa17.97■□□□□ 0.47
ATP2C1-201ENST00000328560 EXOSC9Q06265 439 aaKnown RBP17.97■□□□□ 0.47
ATP2C1-201ENST00000328560 RTN4Q9NQC3 1192 aaKnown RBP17.97■□□□□ 0.47
ATP2C1-201ENST00000328560 PDZRN3Q9UPQ7 1066 aa17.97■□□□□ 0.47
ATP2C1-201ENST00000328560 QRICH2Q9H0J4 1663 aa17.97■□□□□ 0.47
ATP2C1-201ENST00000328560 FRMPD1Q5SYB0 1578 aa17.96■□□□□ 0.47
ATP2C1-201ENST00000328560 ABCC3O15438 1527 aa17.96■□□□□ 0.47
ATP2C1-201ENST00000328560 FBLN1P23142 703 aa17.96■□□□□ 0.47
ATP2C1-201ENST00000328560 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.96■□□□□ 0.47
ATP2C1-201ENST00000328560 IFT172Q9UG01 1749 aa17.96■□□□□ 0.46
ATP2C1-201ENST00000328560 SETBP1Q9Y6X0 1596 aa17.95■□□□□ 0.46
ATP2C1-201ENST00000328560 TERF2IPQ9NYB0 399 aa17.95■□□□□ 0.46
ATP2C1-201ENST00000328560 A0A1W2PP64 1363 aa17.95■□□□□ 0.46
ATP2C1-201ENST00000328560 ZKSCAN2Q63HK3 967 aa17.95■□□□□ 0.46
ATP2C1-201ENST00000328560 PHF23Q9BUL5 403 aaPredicted RBP17.95■□□□□ 0.46
ATP2C1-201ENST00000328560 NINLQ9Y2I6 1382 aa17.94■□□□□ 0.46
ATP2C1-201ENST00000328560 FRAT2O75474 233 aaPredicted RBP17.94■□□□□ 0.46
ATP2C1-201ENST00000328560 RWDD1Q9H446 243 aaPredicted RBP17.94■□□□□ 0.46
ATP2C1-201ENST00000328560 TMPOP42166 694 aaKnown RBP17.94■□□□□ 0.46
ATP2C1-201ENST00000328560 ITPRIPQ8IWB1 547 aa17.93■□□□□ 0.46
ATP2C1-201ENST00000328560 DZIP1LQ8IYY4 767 aaKnown RBP17.93■□□□□ 0.46
ATP2C1-201ENST00000328560 IL27Q8NEV9 243 aa17.93■□□□□ 0.46
ATP2C1-201ENST00000328560 SLKQ9H2G2 1235 aaPredicted RBP17.93■□□□□ 0.46
ATP2C1-201ENST00000328560 FYB1O15117 783 aa17.93■□□□□ 0.46
ATP2C1-201ENST00000328560 RIPK4P57078 832 aa17.93■□□□□ 0.46
ATP2C1-201ENST00000328560 CCDC27Q2M243 656 aa17.93■□□□□ 0.46
ATP2C1-201ENST00000328560 CABP1Q9NZU7 370 aa17.93■□□□□ 0.46
ATP2C1-201ENST00000328560 MYO3AQ8NEV4 1616 aa17.92■□□□□ 0.46
ATP2C1-201ENST00000328560 UPF2Q9HAU5 1272 aaKnown RBP17.92■□□□□ 0.46
ATP2C1-201ENST00000328560 MVPQ14764 893 aaKnown RBP17.91■□□□□ 0.46
ATP2C1-201ENST00000328560 HDGFL2Q7Z4V5 671 aaPredicted RBP17.91■□□□□ 0.46
ATP2C1-201ENST00000328560 TULP4Q9NRJ4 1543 aa17.91■□□□□ 0.46
ATP2C1-201ENST00000328560 CDK19Q9BWU1 502 aa17.91■□□□□ 0.46
ATP2C1-201ENST00000328560 PPLO60437 1756 aa17.91■□□□□ 0.46
ATP2C1-201ENST00000328560 YEATS2Q9ULM3 1422 aa17.91■□□□□ 0.46
ATP2C1-201ENST00000328560 GLI2P10070 1586 aa17.91■□□□□ 0.46
ATP2C1-201ENST00000328560 GSE1Q14687 1217 aa17.91■□□□□ 0.46
ATP2C1-201ENST00000328560 SSH1Q8WYL5 1049 aa17.91■□□□□ 0.46
ATP2C1-201ENST00000328560 DIAPH1O60610 1272 aaKnown RBP17.9■□□□□ 0.46
ATP2C1-201ENST00000328560 USP19O94966 1318 aa17.89■□□□□ 0.45
ATP2C1-201ENST00000328560 WAPLQ7Z5K2 1190 aa17.89■□□□□ 0.45
ATP2C1-201ENST00000328560 SPRYD3Q8NCJ5 442 aa17.89■□□□□ 0.45
ATP2C1-201ENST00000328560 PUS7Q96PZ0 661 aaKnown RBP17.89■□□□□ 0.45
ATP2C1-201ENST00000328560 TRIM35Q9UPQ4 493 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms