RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 NWD1Q149M9 1564 aa26.06■■□□□ 1.76
EXOSC3-201ENST00000327304 TMF1P82094 1093 aa26.05■■□□□ 1.76
EXOSC3-201ENST00000327304 AEBP2Q6ZN18 517 aaPredicted RBP26.04■■□□□ 1.76
EXOSC3-201ENST00000327304 MINK1Q8N4C8 1332 aaPredicted RBP26.04■■□□□ 1.76
EXOSC3-201ENST00000327304 TULP4Q9NRJ4 1543 aa26.02■■□□□ 1.76
EXOSC3-201ENST00000327304 POLR3GLQ9BT43 218 aa26■■□□□ 1.75
EXOSC3-201ENST00000327304 STRCP1A6NGW2 1772 aa26■■□□□ 1.75
EXOSC3-201ENST00000327304 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.99■■□□□ 1.75
EXOSC3-201ENST00000327304 SLC24A1O60721 1099 aa25.98■■□□□ 1.75
EXOSC3-201ENST00000327304 DMRT2Q9Y5R5 561 aa25.98■■□□□ 1.75
EXOSC3-201ENST00000327304 NKTRP30414 1462 aaKnown RBP25.96■■□□□ 1.75
EXOSC3-201ENST00000327304 EVC2Q86UK5 1308 aa25.96■■□□□ 1.75
EXOSC3-201ENST00000327304 CDCA8Q53HL2 280 aa25.93■■□□□ 1.74
EXOSC3-201ENST00000327304 RBM33Q96EV2 1170 aaKnown RBP25.93■■□□□ 1.74
EXOSC3-201ENST00000327304 ADGRB2O60241 1585 aa25.93■■□□□ 1.74
EXOSC3-201ENST00000327304 ZNF335Q9H4Z2 1342 aaPredicted RBP25.92■■□□□ 1.74
EXOSC3-201ENST00000327304 CDK19Q9BWU1 502 aa25.91■■□□□ 1.74
EXOSC3-201ENST00000327304 CABP2Q9NPB3 220 aa25.91■■□□□ 1.74
EXOSC3-201ENST00000327304 PROSER2Q86WR7 435 aaPredicted RBP25.9■■□□□ 1.74
EXOSC3-201ENST00000327304 NALCNQ8IZF0 1738 aa25.9■■□□□ 1.74
EXOSC3-201ENST00000327304 WASLO00401 505 aaPredicted RBP25.88■■□□□ 1.73
EXOSC3-201ENST00000327304 SRPK2P78362 688 aaKnown RBP25.88■■□□□ 1.73
EXOSC3-201ENST00000327304 MYOM1P52179 1685 aa25.87■■□□□ 1.73
EXOSC3-201ENST00000327304 ANP32CO43423 234 aa25.87■■□□□ 1.73
EXOSC3-201ENST00000327304 ADGRL3Q9HAR2 1447 aa25.86■■□□□ 1.73
EXOSC3-201ENST00000327304 CENPBP07199 599 aaPredicted RBP25.85■■□□□ 1.73
EXOSC3-201ENST00000327304 PUS7Q96PZ0 661 aaKnown RBP25.85■■□□□ 1.73
EXOSC3-201ENST00000327304 TMEM94Q12767 1356 aa25.84■■□□□ 1.73
EXOSC3-201ENST00000327304 CDC42BPGQ6DT37 1551 aa25.82■■□□□ 1.72
EXOSC3-201ENST00000327304 C14orf37Q86TY3 774 aa25.81■■□□□ 1.72
EXOSC3-201ENST00000327304 LRRC7Q96NW7 1537 aa25.81■■□□□ 1.72
EXOSC3-201ENST00000327304 ATAD2Q6PL18 1390 aa25.81■■□□□ 1.72
EXOSC3-201ENST00000327304 CCER2I3L3R5 266 aa25.8■■□□□ 1.72
EXOSC3-201ENST00000327304 XIRP1Q702N8 1843 aaKnown RBP25.8■■□□□ 1.72
EXOSC3-201ENST00000327304 PRR36Q9H6K5 1346 aa25.79■■□□□ 1.72
EXOSC3-201ENST00000327304 ATP7BP35670 1465 aa25.79■■□□□ 1.72
EXOSC3-201ENST00000327304 FMN2Q9NZ56 1722 aa25.78■■□□□ 1.72
EXOSC3-201ENST00000327304 TMC1Q8TDI8 760 aa25.78■■□□□ 1.72
EXOSC3-201ENST00000327304 NCOA3Q9Y6Q9 1424 aa25.78■■□□□ 1.72
EXOSC3-201ENST00000327304 NUTM2FA1L443 756 aa25.77■■□□□ 1.72
EXOSC3-201ENST00000327304 NUDT16Q96DE0 195 aaKnown RBP25.77■■□□□ 1.72
EXOSC3-201ENST00000327304 SLC12A5Q9H2X9 1139 aa25.77■■□□□ 1.72
EXOSC3-201ENST00000327304 USP32Q8NFA0 1604 aa25.77■■□□□ 1.72
EXOSC3-201ENST00000327304 PANK3Q9H999 370 aa25.75■■□□□ 1.71
EXOSC3-201ENST00000327304 YTHDC1Q96MU7 727 aaKnown RBP25.74■■□□□ 1.71
EXOSC3-201ENST00000327304 TOPAZ1Q8N9V7 1692 aa25.73■■□□□ 1.71
EXOSC3-201ENST00000327304 C19orf44Q9H6X5 657 aa25.73■■□□□ 1.71
EXOSC3-201ENST00000327304 LTBP4Q8N2S1 1624 aa25.73■■□□□ 1.71
EXOSC3-201ENST00000327304 NINLQ9Y2I6 1382 aa25.73■■□□□ 1.71
EXOSC3-201ENST00000327304 PPIP5K1Q6PFW1 1433 aa25.72■■□□□ 1.71
EXOSC3-201ENST00000327304 CABP1Q9NZU7 370 aa25.72■■□□□ 1.71
EXOSC3-201ENST00000327304 ANKARQ7Z5J8 1434 aa25.71■■□□□ 1.71
EXOSC3-201ENST00000327304 CCDC61Q9Y6R9 512 aa25.71■■□□□ 1.71
EXOSC3-201ENST00000327304 RGPD8O14715 1765 aaPredicted RBP25.7■■□□□ 1.71
EXOSC3-201ENST00000327304 MSH6P52701 1360 aa25.69■■□□□ 1.7
EXOSC3-201ENST00000327304 DCCP43146 1447 aa25.69■■□□□ 1.7
EXOSC3-201ENST00000327304 CD163L1Q9NR16 1453 aa25.68■■□□□ 1.7
EXOSC3-201ENST00000327304 ITSN1Q15811 1721 aa25.67■■□□□ 1.7
EXOSC3-201ENST00000327304 ANKRD36BQ8N2N9 1353 aa25.67■■□□□ 1.7
EXOSC3-201ENST00000327304 PER1O15534 1290 aaPredicted RBP25.66■■□□□ 1.7
EXOSC3-201ENST00000327304 A0A1W2PP64 1363 aa25.66■■□□□ 1.7
EXOSC3-201ENST00000327304 ATF3P18847 181 aa25.65■■□□□ 1.7
EXOSC3-201ENST00000327304 CARD14Q9BXL6 1004 aa25.65■■□□□ 1.7
EXOSC3-201ENST00000327304 MST1RQ04912 1400 aa25.63■■□□□ 1.69
EXOSC3-201ENST00000327304 PLEKHG3A1L390 1219 aa25.63■■□□□ 1.69
EXOSC3-201ENST00000327304 TERF2IPQ9NYB0 399 aa25.63■■□□□ 1.69
EXOSC3-201ENST00000327304 NSD3Q9BZ95 1437 aa25.62■■□□□ 1.69
EXOSC3-201ENST00000327304 CADPS2Q86UW7 1296 aa25.61■■□□□ 1.69
EXOSC3-201ENST00000327304 C1orf167Q5SNV9 1468 aa25.61■■□□□ 1.69
EXOSC3-201ENST00000327304 CPSF1Q10570 1443 aaKnown RBP25.61■■□□□ 1.69
EXOSC3-201ENST00000327304 HDGFL2Q7Z4V5 671 aaPredicted RBP25.6■■□□□ 1.69
EXOSC3-201ENST00000327304 PMFBP1Q8TBY8 1022 aa25.6■■□□□ 1.69
EXOSC3-201ENST00000327304 AKAP12Q02952 1782 aa25.59■■□□□ 1.69
EXOSC3-201ENST00000327304 ACEP12821 1306 aa25.59■■□□□ 1.69
EXOSC3-201ENST00000327304 PRKRIP1Q9H875 184 aaPredicted RBP25.59■■□□□ 1.69
EXOSC3-201ENST00000327304 KNSTRNQ9Y448 316 aa25.59■■□□□ 1.69
EXOSC3-201ENST00000327304 ESCO1Q5FWF5 840 aa25.58■■□□□ 1.68
EXOSC3-201ENST00000327304 CNGB1Q14028 1251 aaPredicted RBP25.57■■□□□ 1.68
EXOSC3-201ENST00000327304 ORAI2Q96SN7 254 aa25.57■■□□□ 1.68
EXOSC3-201ENST00000327304 PHF8Q9UPP1 1060 aa25.57■■□□□ 1.68
EXOSC3-201ENST00000327304 KTN1Q86UP2 1357 aaKnown RBP25.57■■□□□ 1.68
EXOSC3-201ENST00000327304 MON2Q7Z3U7 1717 aa25.57■■□□□ 1.68
EXOSC3-201ENST00000327304 POLR3AO14802 1390 aaPredicted RBP25.56■■□□□ 1.68
EXOSC3-201ENST00000327304 AMER1Q5JTC6 1135 aaPredicted RBP25.55■■□□□ 1.68
EXOSC3-201ENST00000327304 NGDNQ8NEJ9 315 aaKnown RBP25.54■■□□□ 1.68
EXOSC3-201ENST00000327304 ZNF692Q9BU19 519 aaPredicted RBP25.52■■□□□ 1.68
EXOSC3-201ENST00000327304 USP6P35125 1406 aa25.52■■□□□ 1.68
EXOSC3-201ENST00000327304 EDC4Q6P2E9 1401 aaKnown RBP25.52■■□□□ 1.68
EXOSC3-201ENST00000327304 CC2D1BQ5T0F9 858 aaKnown RBP25.51■■□□□ 1.67
EXOSC3-201ENST00000327304 NRKQ7Z2Y5 1582 aa25.51■■□□□ 1.67
EXOSC3-201ENST00000327304 KIF1AQ12756 1690 aa25.5■■□□□ 1.67
EXOSC3-201ENST00000327304 SLAIN2Q9P270 581 aa25.49■■□□□ 1.67
EXOSC3-201ENST00000327304 CGNL1Q0VF96 1302 aa25.49■■□□□ 1.67
EXOSC3-201ENST00000327304 NPC1L1Q9UHC9 1359 aa25.49■■□□□ 1.67
EXOSC3-201ENST00000327304 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.48■■□□□ 1.67
EXOSC3-201ENST00000327304 SSH2Q76I76 1423 aa25.47■■□□□ 1.67
EXOSC3-201ENST00000327304 FOXO3O43524 673 aa25.45■■□□□ 1.66
EXOSC3-201ENST00000327304 KIF20BQ96Q89 1820 aa25.45■■□□□ 1.66
EXOSC3-201ENST00000327304 PARD3Q8TEW0 1356 aa25.45■■□□□ 1.66
EXOSC3-201ENST00000327304 TTC21BQ7Z4L5 1316 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms