RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 CFAP70Q5T0N1 1121 aa31.15■■■□□ 2.58
UBE2D3-201ENST00000321805 WAPLQ7Z5K2 1190 aa31.12■■■□□ 2.57
UBE2D3-201ENST00000321805 LRRC59Q96AG4 307 aaKnown RBP31.12■■■□□ 2.57
UBE2D3-201ENST00000321805 DLC1Q96QB1 1528 aa31.12■■■□□ 2.57
UBE2D3-201ENST00000321805 ADGRB1O14514 1584 aa31.11■■■□□ 2.57
UBE2D3-201ENST00000321805 RGS17Q9UGC6 210 aaPredicted RBP31.11■■■□□ 2.57
UBE2D3-201ENST00000321805 PLEKHH1Q9ULM0 1364 aa31.1■■■□□ 2.57
UBE2D3-201ENST00000321805 DCAF11Q8TEB1 546 aa31.1■■■□□ 2.57
UBE2D3-201ENST00000321805 LRP6O75581 1613 aa31.09■■■□□ 2.57
UBE2D3-201ENST00000321805 FMN2Q9NZ56 1722 aa31.07■■■□□ 2.56
UBE2D3-201ENST00000321805 ORAI2Q96SN7 254 aa31.06■■■□□ 2.56
UBE2D3-201ENST00000321805 SOS2Q07890 1332 aaPredicted RBP31.05■■■□□ 2.56
UBE2D3-201ENST00000321805 KDM2AQ9Y2K7 1162 aa31.04■■■□□ 2.56
UBE2D3-201ENST00000321805 DDX17Q92841 729 aaKnown RBP31.02■■■□□ 2.56
UBE2D3-201ENST00000321805 PNPLA6Q8IY17 1366 aa31.02■■■□□ 2.56
UBE2D3-201ENST00000321805 NPHP3Q7Z494 1330 aa31.01■■■□□ 2.56
UBE2D3-201ENST00000321805 ESCO1Q5FWF5 840 aa31■■■□□ 2.55
UBE2D3-201ENST00000321805 MEX3CQ5U5Q3 659 aaKnown RBP30.99■■■□□ 2.55
UBE2D3-201ENST00000321805 PRAM1Q96QH2 718 aa30.99■■■□□ 2.55
UBE2D3-201ENST00000321805 ADGRB2O60241 1585 aa30.99■■■□□ 2.55
UBE2D3-201ENST00000321805 KIF1AQ12756 1690 aa30.99■■■□□ 2.55
UBE2D3-201ENST00000321805 KIAA1210Q9ULL0 1709 aa30.96■■■□□ 2.55
UBE2D3-201ENST00000321805 POTEAQ6S8J7 498 aa30.95■■■□□ 2.55
UBE2D3-201ENST00000321805 POGKQ9P215 609 aa30.95■■■□□ 2.55
UBE2D3-201ENST00000321805 PXDNQ92626 1479 aa30.95■■■□□ 2.54
UBE2D3-201ENST00000321805 COL22A1Q8NFW1 1626 aaPredicted RBP30.92■■■□□ 2.54
UBE2D3-201ENST00000321805 ZNF772Q68DY9 489 aaPredicted RBP30.92■■■□□ 2.54
UBE2D3-201ENST00000321805 NUTM2BA6NNL0 878 aaPredicted RBP30.91■■■□□ 2.54
UBE2D3-201ENST00000321805 NUTM2EB1AL46 878 aaPredicted RBP30.91■■■□□ 2.54
UBE2D3-201ENST00000321805 NUTM2AQ8IVF1 878 aaPredicted RBP30.91■■■□□ 2.54
UBE2D3-201ENST00000321805 TRAK1Q9UPV9 953 aa30.91■■■□□ 2.54
UBE2D3-201ENST00000321805 ANKARQ7Z5J8 1434 aa30.9■■■□□ 2.54
UBE2D3-201ENST00000321805 NUTM2FA1L443 756 aa30.89■■■□□ 2.54
UBE2D3-201ENST00000321805 ARHGEF28Q8N1W1 1705 aaKnown RBP30.88■■■□□ 2.53
UBE2D3-201ENST00000321805 FOXO3O43524 673 aa30.88■■■□□ 2.53
UBE2D3-201ENST00000321805 SAFB2Q14151 953 aaKnown RBP eCLIP30.88■■■□□ 2.53
UBE2D3-201ENST00000321805 EIF3AQ14152 1382 aaKnown RBP30.88■■■□□ 2.53
UBE2D3-201ENST00000321805 RGPD8O14715 1765 aaPredicted RBP30.86■■■□□ 2.53
UBE2D3-201ENST00000321805 PHF8Q9UPP1 1060 aa30.82■■■□□ 2.52
UBE2D3-201ENST00000321805 USP32Q8NFA0 1604 aa30.82■■■□□ 2.52
UBE2D3-201ENST00000321805 TULP4Q9NRJ4 1543 aa30.8■■■□□ 2.52
UBE2D3-201ENST00000321805 AFF2P51816 1311 aa30.79■■■□□ 2.52
UBE2D3-201ENST00000321805 MINK1Q8N4C8 1332 aaPredicted RBP30.77■■■□□ 2.52
UBE2D3-201ENST00000321805 XPCQ01831 940 aaPredicted RBP30.77■■■□□ 2.52
UBE2D3-201ENST00000321805 C8orf37Q96NL8 207 aa30.77■■■□□ 2.52
UBE2D3-201ENST00000321805 SPATA31A3Q5VYP0 1347 aa30.76■■■□□ 2.52
UBE2D3-201ENST00000321805 WASLO00401 505 aaPredicted RBP30.76■■■□□ 2.51
UBE2D3-201ENST00000321805 KRT28Q7Z3Y7 464 aa30.75■■■□□ 2.51
UBE2D3-201ENST00000321805 HIRIP3Q9BW71 556 aaPredicted RBP30.75■■■□□ 2.51
UBE2D3-201ENST00000321805 PSME1Q06323 249 aa30.74■■■□□ 2.51
UBE2D3-201ENST00000321805 TRIM26Q12899 539 aaPredicted RBP30.74■■■□□ 2.51
UBE2D3-201ENST00000321805 ADAMTS2O95450 1211 aa30.73■■■□□ 2.51
UBE2D3-201ENST00000321805 L3MBTL2Q969R5 705 aa30.73■■■□□ 2.51
UBE2D3-201ENST00000321805 SBNO1A3KN83 1393 aa30.73■■■□□ 2.51
UBE2D3-201ENST00000321805 TNS3Q68CZ2 1445 aa30.73■■■□□ 2.51
UBE2D3-201ENST00000321805 CDK12Q9NYV4 1490 aaPredicted RBP30.72■■■□□ 2.51
UBE2D3-201ENST00000321805 MARF1Q9Y4F3 1742 aaKnown RBP30.71■■■□□ 2.51
UBE2D3-201ENST00000321805 SIN3AQ96ST3 1273 aa30.71■■■□□ 2.51
UBE2D3-201ENST00000321805 ITSN1Q15811 1721 aa30.7■■■□□ 2.51
UBE2D3-201ENST00000321805 NGLY1Q96IV0 654 aa30.7■■■□□ 2.51
UBE2D3-201ENST00000321805 PRR36Q9H6K5 1346 aa30.7■■■□□ 2.5
UBE2D3-201ENST00000321805 RXRBP28702 533 aa30.69■■■□□ 2.5
UBE2D3-201ENST00000321805 NBPF1Q3BBV0 1214 aa30.69■■■□□ 2.5
UBE2D3-201ENST00000321805 ATP7BP35670 1465 aa30.67■■■□□ 2.5
UBE2D3-201ENST00000321805 ARHGEF10O15013 1369 aa30.66■■■□□ 2.5
UBE2D3-201ENST00000321805 FNBP4Q8N3X1 1017 aaPredicted RBP30.66■■■□□ 2.5
UBE2D3-201ENST00000321805 TRPM1Q7Z4N2 1603 aa30.65■■■□□ 2.5
UBE2D3-201ENST00000321805 PMFBP1Q8TBY8 1022 aa30.65■■■□□ 2.5
UBE2D3-201ENST00000321805 NEUROD1Q13562 356 aa30.64■■■□□ 2.5
UBE2D3-201ENST00000321805 GPRASP1Q5JY77 1395 aa30.64■■■□□ 2.5
UBE2D3-201ENST00000321805 TRPM3Q9HCF6 1732 aaPredicted RBP30.64■■■□□ 2.5
UBE2D3-201ENST00000321805 QTRT2Q9H974 415 aaKnown RBP30.62■■■□□ 2.49
UBE2D3-201ENST00000321805 RBM6P78332 1123 aaKnown RBP30.61■■■□□ 2.49
UBE2D3-201ENST00000321805 USP21Q9UK80 565 aa30.61■■■□□ 2.49
UBE2D3-201ENST00000321805 CENPJQ9HC77 1338 aaPredicted RBP30.61■■■□□ 2.49
UBE2D3-201ENST00000321805 TOPAZ1Q8N9V7 1692 aa30.59■■■□□ 2.49
UBE2D3-201ENST00000321805 NUDT16Q96DE0 195 aaKnown RBP30.59■■■□□ 2.49
UBE2D3-201ENST00000321805 CDK19Q9BWU1 502 aa30.58■■■□□ 2.49
UBE2D3-201ENST00000321805 TRPC5Q9UL62 973 aaPredicted RBP30.58■■■□□ 2.49
UBE2D3-201ENST00000321805 ABCA3Q99758 1704 aa30.58■■■□□ 2.49
UBE2D3-201ENST00000321805 ALS2Q96Q42 1657 aa30.58■■■□□ 2.49
UBE2D3-201ENST00000321805 QRICH2Q9H0J4 1663 aa30.57■■■□□ 2.48
UBE2D3-201ENST00000321805 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.56■■■□□ 2.48
UBE2D3-201ENST00000321805 NGDNQ8NEJ9 315 aaKnown RBP30.56■■■□□ 2.48
UBE2D3-201ENST00000321805 ATRNO75882 1429 aa30.56■■■□□ 2.48
UBE2D3-201ENST00000321805 BCL9LQ86UU0 1499 aa30.55■■■□□ 2.48
UBE2D3-201ENST00000321805 ROCK2O75116 1388 aaKnown RBP30.54■■■□□ 2.48
UBE2D3-201ENST00000321805 CCDC61Q9Y6R9 512 aa30.54■■■□□ 2.48
UBE2D3-201ENST00000321805 RGS12O14924 1447 aa30.53■■■□□ 2.48
UBE2D3-201ENST00000321805 SLIT2O94813 1529 aa30.52■■■□□ 2.48
UBE2D3-201ENST00000321805 HAP1P54257 671 aaPredicted RBP30.52■■■□□ 2.48
UBE2D3-201ENST00000321805 LMOD2Q6P5Q4 547 aa30.52■■■□□ 2.48
UBE2D3-201ENST00000321805 POLR3AO14802 1390 aaPredicted RBP30.52■■■□□ 2.48
UBE2D3-201ENST00000321805 TONSLQ96HA7 1378 aa30.5■■■□□ 2.47
UBE2D3-201ENST00000321805 PLEKHG3A1L390 1219 aa30.49■■■□□ 2.47
UBE2D3-201ENST00000321805 NWD2Q9ULI1 1742 aa30.47■■■□□ 2.47
UBE2D3-201ENST00000321805 CABLES1Q8TDN4 633 aa30.46■■■□□ 2.47
UBE2D3-201ENST00000321805 SRPK2P78362 688 aaKnown RBP30.45■■■□□ 2.47
UBE2D3-201ENST00000321805 UNC5CLQ8IV45 518 aa30.45■■■□□ 2.47
UBE2D3-201ENST00000321805 CRYBG1Q9Y4K1 1723 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms