RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 ZNF316A6NFI3 1004 aaPredicted RBP13.66□□□□□ -0.22
KARS-202ENST00000319410 BRINP3Q76B58 766 aa13.66□□□□□ -0.22
KARS-202ENST00000319410 NALCNQ8IZF0 1738 aa13.66□□□□□ -0.22
KARS-202ENST00000319410 STAC3Q96MF2 364 aa13.65□□□□□ -0.22
KARS-202ENST00000319410 RGS17Q9UGC6 210 aaPredicted RBP13.65□□□□□ -0.22
KARS-202ENST00000319410 DDX17Q92841 729 aaKnown RBP13.65□□□□□ -0.22
KARS-202ENST00000319410 COL16A1Q07092 1604 aaPredicted RBP13.65□□□□□ -0.22
KARS-202ENST00000319410 STK26Q9P289 416 aa13.64□□□□□ -0.23
KARS-202ENST00000319410 MST1RQ04912 1400 aa13.64□□□□□ -0.23
KARS-202ENST00000319410 ADGRL3Q9HAR2 1447 aa13.64□□□□□ -0.23
KARS-202ENST00000319410 TMEM132EQ6IEE7 984 aa13.63□□□□□ -0.23
KARS-202ENST00000319410 DCCP43146 1447 aa13.62□□□□□ -0.23
KARS-202ENST00000319410 GLIPR1L2Q4G1C9 344 aa13.62□□□□□ -0.23
KARS-202ENST00000319410 JCADQ9P266 1359 aa13.62□□□□□ -0.23
KARS-202ENST00000319410 IFT172Q9UG01 1749 aa13.62□□□□□ -0.23
KARS-202ENST00000319410 MSH5O43196 834 aa13.62□□□□□ -0.23
KARS-202ENST00000319410 ASXL1Q8IXJ9 1541 aa13.61□□□□□ -0.23
KARS-202ENST00000319410 CCER1Q8TC90 406 aaPredicted RBP13.61□□□□□ -0.23
KARS-202ENST00000319410 FANCIQ9NVI1 1328 aa13.61□□□□□ -0.23
KARS-202ENST00000319410 PTCH1Q13635 1447 aa13.61□□□□□ -0.23
KARS-202ENST00000319410 WAPLQ7Z5K2 1190 aa13.6□□□□□ -0.23
KARS-202ENST00000319410 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.6□□□□□ -0.23
KARS-202ENST00000319410 AHDC1Q5TGY3 1603 aaPredicted RBP13.6□□□□□ -0.23
KARS-202ENST00000319410 MIER1Q8N108 512 aa13.59□□□□□ -0.23
KARS-202ENST00000319410 MYOM2P54296 1465 aa13.59□□□□□ -0.23
KARS-202ENST00000319410 PIK3C2GO75747 1445 aa13.59□□□□□ -0.23
KARS-202ENST00000319410 POTEAQ6S8J7 498 aa13.59□□□□□ -0.23
KARS-202ENST00000319410 ORAI2Q96SN7 254 aa13.59□□□□□ -0.23
KARS-202ENST00000319410 LRP6O75581 1613 aa13.58□□□□□ -0.23
KARS-202ENST00000319410 NUTM2FA1L443 756 aa13.58□□□□□ -0.24
KARS-202ENST00000319410 NUTM2BA6NNL0 878 aaPredicted RBP13.58□□□□□ -0.24
KARS-202ENST00000319410 NUTM2EB1AL46 878 aaPredicted RBP13.58□□□□□ -0.24
KARS-202ENST00000319410 NUTM2AQ8IVF1 878 aaPredicted RBP13.58□□□□□ -0.24
KARS-202ENST00000319410 C1orf167Q5SNV9 1468 aa13.58□□□□□ -0.24
KARS-202ENST00000319410 PLEKHH1Q9ULM0 1364 aa13.57□□□□□ -0.24
KARS-202ENST00000319410 NRXN1Q9ULB1 1477 aa13.57□□□□□ -0.24
KARS-202ENST00000319410 CFAP70Q5T0N1 1121 aa13.57□□□□□ -0.24
KARS-202ENST00000319410 NHSL1Q5SYE7 1610 aa13.56□□□□□ -0.24
KARS-202ENST00000319410 MEX3CQ5U5Q3 659 aaKnown RBP13.55□□□□□ -0.24
KARS-202ENST00000319410 KDM2AQ9Y2K7 1162 aa13.55□□□□□ -0.24
KARS-202ENST00000319410 LRPPRCP42704 1394 aaKnown RBP13.55□□□□□ -0.24
KARS-202ENST00000319410 PRAG1Q86YV5 1406 aa13.55□□□□□ -0.24
KARS-202ENST00000319410 SHPRHQ149N8 1683 aa13.54□□□□□ -0.24
KARS-202ENST00000319410 YTHDC2Q9H6S0 1430 aaKnown RBP13.54□□□□□ -0.24
KARS-202ENST00000319410 SPATA31A6Q5VVP1 1343 aa13.54□□□□□ -0.24
KARS-202ENST00000319410 SAFB2Q14151 953 aaKnown RBP eCLIP13.54□□□□□ -0.24
KARS-202ENST00000319410 C14orf93Q9H972 538 aaKnown RBP13.53□□□□□ -0.24
KARS-202ENST00000319410 ESCO1Q5FWF5 840 aa13.53□□□□□ -0.24
KARS-202ENST00000319410 SIN3AQ96ST3 1273 aa13.53□□□□□ -0.24
KARS-202ENST00000319410 DCAF11Q8TEB1 546 aa13.52□□□□□ -0.24
KARS-202ENST00000319410 TECPR2O15040 1411 aa13.52□□□□□ -0.25
KARS-202ENST00000319410 ABCC11Q96J66 1382 aa13.52□□□□□ -0.25
KARS-202ENST00000319410 XPCQ01831 940 aaPredicted RBP13.52□□□□□ -0.25
KARS-202ENST00000319410 LRRC59Q96AG4 307 aaKnown RBP13.52□□□□□ -0.25
KARS-202ENST00000319410 TIMELESSQ9UNS1 1208 aa13.52□□□□□ -0.25
KARS-202ENST00000319410 LAMC1P11047 1609 aa13.51□□□□□ -0.25
KARS-202ENST00000319410 CDC42BPGQ6DT37 1551 aa13.51□□□□□ -0.25
KARS-202ENST00000319410 KNDC1Q76NI1 1749 aa13.5□□□□□ -0.25
KARS-202ENST00000319410 PNPLA6Q8IY17 1366 aa13.5□□□□□ -0.25
KARS-202ENST00000319410 FOXO3O43524 673 aa13.49□□□□□ -0.25
KARS-202ENST00000319410 PRAM1Q96QH2 718 aa13.49□□□□□ -0.25
KARS-202ENST00000319410 PDE4CQ08493 712 aa13.49□□□□□ -0.25
KARS-202ENST00000319410 L3MBTL2Q969R5 705 aa13.49□□□□□ -0.25
KARS-202ENST00000319410 ADAMTS2O95450 1211 aa13.48□□□□□ -0.25
KARS-202ENST00000319410 TRAK1Q9UPV9 953 aa13.48□□□□□ -0.25
KARS-202ENST00000319410 C8orf37Q96NL8 207 aa13.48□□□□□ -0.25
KARS-202ENST00000319410 SOS2Q07890 1332 aaPredicted RBP13.47□□□□□ -0.25
KARS-202ENST00000319410 TONSLQ96HA7 1378 aa13.47□□□□□ -0.25
KARS-202ENST00000319410 KIAA1210Q9ULL0 1709 aa13.46□□□□□ -0.25
KARS-202ENST00000319410 HIRIP3Q9BW71 556 aaPredicted RBP13.46□□□□□ -0.25
KARS-202ENST00000319410 AFF2P51816 1311 aa13.46□□□□□ -0.26
KARS-202ENST00000319410 PDIA4P13667 645 aaKnown RBP13.45□□□□□ -0.26
KARS-202ENST00000319410 POGKQ9P215 609 aa13.45□□□□□ -0.26
KARS-202ENST00000319410 FMN2Q9NZ56 1722 aa13.45□□□□□ -0.26
KARS-202ENST00000319410 ADGRB1O14514 1584 aa13.45□□□□□ -0.26
KARS-202ENST00000319410 SIRT1Q96EB6 747 aa13.45□□□□□ -0.26
KARS-202ENST00000319410 ZNF772Q68DY9 489 aaPredicted RBP13.44□□□□□ -0.26
KARS-202ENST00000319410 NPHP3Q7Z494 1330 aa13.44□□□□□ -0.26
KARS-202ENST00000319410 RGPD8O14715 1765 aaPredicted RBP13.44□□□□□ -0.26
KARS-202ENST00000319410 ZMYND15Q9H091 742 aa13.44□□□□□ -0.26
KARS-202ENST00000319410 PXDNQ92626 1479 aa13.43□□□□□ -0.26
KARS-202ENST00000319410 NCBP3Q53F19 620 aaKnown RBP13.43□□□□□ -0.26
KARS-202ENST00000319410 MINK1Q8N4C8 1332 aaPredicted RBP13.43□□□□□ -0.26
KARS-202ENST00000319410 IL27Q8NEV9 243 aa13.42□□□□□ -0.26
KARS-202ENST00000319410 NGLY1Q96IV0 654 aa13.42□□□□□ -0.26
KARS-202ENST00000319410 FGD1P98174 961 aa13.41□□□□□ -0.26
KARS-202ENST00000319410 DLC1Q96QB1 1528 aa13.41□□□□□ -0.26
KARS-202ENST00000319410 PMFBP1Q8TBY8 1022 aa13.4□□□□□ -0.26
KARS-202ENST00000319410 RXRBP28702 533 aa13.4□□□□□ -0.26
KARS-202ENST00000319410 PHF8Q9UPP1 1060 aa13.4□□□□□ -0.26
KARS-202ENST00000319410 KRT28Q7Z3Y7 464 aa13.39□□□□□ -0.27
KARS-202ENST00000319410 QTRT2Q9H974 415 aaKnown RBP13.39□□□□□ -0.27
KARS-202ENST00000319410 USP32Q8NFA0 1604 aa13.38□□□□□ -0.27
KARS-202ENST00000319410 NBPF1Q3BBV0 1214 aa13.38□□□□□ -0.27
KARS-202ENST00000319410 LMOD2Q6P5Q4 547 aa13.38□□□□□ -0.27
KARS-202ENST00000319410 TRPM1Q7Z4N2 1603 aa13.37□□□□□ -0.27
KARS-202ENST00000319410 COL22A1Q8NFW1 1626 aaPredicted RBP13.37□□□□□ -0.27
KARS-202ENST00000319410 KIF1AQ12756 1690 aa13.37□□□□□ -0.27
KARS-202ENST00000319410 RTN4Q9NQC3 1192 aaKnown RBP13.37□□□□□ -0.27
KARS-202ENST00000319410 GPRASP1Q5JY77 1395 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms