RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 PLEKHH1Q9ULM0 1364 aa38.1■■■■□ 3.69
CTDNEP1-201ENST00000318988 MINK1Q8N4C8 1332 aaPredicted RBP38.09■■■■□ 3.69
CTDNEP1-201ENST00000318988 XRN1Q8IZH2 1706 aaKnown RBP38.09■■■■□ 3.69
CTDNEP1-201ENST00000318988 EVC2Q86UK5 1308 aa38.08■■■■□ 3.69
CTDNEP1-201ENST00000318988 CHD2O14647 1828 aaKnown RBP38.07■■■■□ 3.69
CTDNEP1-201ENST00000318988 DDX10Q13206 875 aaKnown RBP38.04■■■■□ 3.68
CTDNEP1-201ENST00000318988 NWD1Q149M9 1564 aa37.98■■■■□ 3.67
CTDNEP1-201ENST00000318988 DIEXFQ68CQ4 756 aaKnown RBP37.97■■■■□ 3.67
CTDNEP1-201ENST00000318988 SRPK2P78362 688 aaKnown RBP37.95■■■■□ 3.67
CTDNEP1-201ENST00000318988 PUS7Q96PZ0 661 aaKnown RBP37.94■■■■□ 3.66
CTDNEP1-201ENST00000318988 TULP4Q9NRJ4 1543 aa37.94■■■■□ 3.66
CTDNEP1-201ENST00000318988 NKTRP30414 1462 aaKnown RBP37.93■■■■□ 3.66
CTDNEP1-201ENST00000318988 PROSER2Q86WR7 435 aaPredicted RBP37.92■■■■□ 3.66
CTDNEP1-201ENST00000318988 CDK19Q9BWU1 502 aa37.92■■■■□ 3.66
CTDNEP1-201ENST00000318988 WASLO00401 505 aaPredicted RBP37.9■■■■□ 3.66
CTDNEP1-201ENST00000318988 CABP2Q9NPB3 220 aa37.89■■■■□ 3.66
CTDNEP1-201ENST00000318988 C14orf37Q86TY3 774 aa37.87■■■■□ 3.65
CTDNEP1-201ENST00000318988 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.86■■■■□ 3.65
CTDNEP1-201ENST00000318988 ADGRB2O60241 1585 aa37.84■■■■□ 3.65
CTDNEP1-201ENST00000318988 ATAD2Q6PL18 1390 aa37.84■■■■□ 3.65
CTDNEP1-201ENST00000318988 RBM33Q96EV2 1170 aaKnown RBP37.82■■■■□ 3.65
CTDNEP1-201ENST00000318988 TMC1Q8TDI8 760 aa37.82■■■■□ 3.64
CTDNEP1-201ENST00000318988 ZNF335Q9H4Z2 1342 aaPredicted RBP37.81■■■■□ 3.64
CTDNEP1-201ENST00000318988 ADGRL3Q9HAR2 1447 aa37.77■■■■□ 3.64
CTDNEP1-201ENST00000318988 STRCP1A6NGW2 1772 aa37.76■■■■□ 3.64
CTDNEP1-201ENST00000318988 TMEM94Q12767 1356 aa37.74■■■■□ 3.63
CTDNEP1-201ENST00000318988 NINLQ9Y2I6 1382 aa37.74■■■■□ 3.63
CTDNEP1-201ENST00000318988 NCOA3Q9Y6Q9 1424 aa37.73■■■■□ 3.63
CTDNEP1-201ENST00000318988 PANK3Q9H999 370 aa37.73■■■■□ 3.63
CTDNEP1-201ENST00000318988 NUDT16Q96DE0 195 aaKnown RBP37.72■■■■□ 3.63
CTDNEP1-201ENST00000318988 SLC12A5Q9H2X9 1139 aa37.71■■■■□ 3.63
CTDNEP1-201ENST00000318988 NALCNQ8IZF0 1738 aa37.7■■■■□ 3.63
CTDNEP1-201ENST00000318988 C19orf44Q9H6X5 657 aa37.69■■■■□ 3.62
CTDNEP1-201ENST00000318988 MYOM1P52179 1685 aa37.68■■■■□ 3.62
CTDNEP1-201ENST00000318988 CCDC61Q9Y6R9 512 aa37.68■■■■□ 3.62
CTDNEP1-201ENST00000318988 NUTM2FA1L443 756 aa37.67■■■■□ 3.62
CTDNEP1-201ENST00000318988 CDC42BPGQ6DT37 1551 aa37.67■■■■□ 3.62
CTDNEP1-201ENST00000318988 CABP1Q9NZU7 370 aa37.65■■■■□ 3.62
CTDNEP1-201ENST00000318988 TERF2IPQ9NYB0 399 aa37.63■■■■□ 3.61
CTDNEP1-201ENST00000318988 ATP7BP35670 1465 aa37.63■■■■□ 3.61
CTDNEP1-201ENST00000318988 LRRC7Q96NW7 1537 aa37.63■■■■□ 3.61
CTDNEP1-201ENST00000318988 PRR36Q9H6K5 1346 aa37.63■■■■□ 3.61
CTDNEP1-201ENST00000318988 PPIP5K1Q6PFW1 1433 aa37.62■■■■□ 3.61
CTDNEP1-201ENST00000318988 ANKARQ7Z5J8 1434 aa37.62■■■■□ 3.61
CTDNEP1-201ENST00000318988 ATF3P18847 181 aa37.61■■■■□ 3.61
CTDNEP1-201ENST00000318988 MSH6P52701 1360 aa37.61■■■■□ 3.61
CTDNEP1-201ENST00000318988 HDGFL2Q7Z4V5 671 aaPredicted RBP37.61■■■■□ 3.61
CTDNEP1-201ENST00000318988 ANKRD36BQ8N2N9 1353 aa37.59■■■■□ 3.61
CTDNEP1-201ENST00000318988 KNSTRNQ9Y448 316 aa37.59■■■■□ 3.61
CTDNEP1-201ENST00000318988 FMN2Q9NZ56 1722 aa37.58■■■■□ 3.61
CTDNEP1-201ENST00000318988 ANP32CO43423 234 aa37.58■■■■□ 3.61
CTDNEP1-201ENST00000318988 DCCP43146 1447 aa37.56■■■■□ 3.6
CTDNEP1-201ENST00000318988 CADPS2Q86UW7 1296 aa37.54■■■■□ 3.6
CTDNEP1-201ENST00000318988 PER1O15534 1290 aaPredicted RBP37.53■■■■□ 3.6
CTDNEP1-201ENST00000318988 PLEKHG3A1L390 1219 aa37.51■■■■□ 3.6
CTDNEP1-201ENST00000318988 A0A1W2PP64 1363 aa37.51■■■■□ 3.59
CTDNEP1-201ENST00000318988 USP32Q8NFA0 1604 aa37.5■■■■□ 3.59
CTDNEP1-201ENST00000318988 ITSN1Q15811 1721 aa37.5■■■■□ 3.59
CTDNEP1-201ENST00000318988 CARD14Q9BXL6 1004 aa37.49■■■■□ 3.59
CTDNEP1-201ENST00000318988 TOPAZ1Q8N9V7 1692 aa37.48■■■■□ 3.59
CTDNEP1-201ENST00000318988 ZNF692Q9BU19 519 aaPredicted RBP37.47■■■■□ 3.59
CTDNEP1-201ENST00000318988 NSD3Q9BZ95 1437 aa37.47■■■■□ 3.59
CTDNEP1-201ENST00000318988 CNGB1Q14028 1251 aaPredicted RBP37.46■■■■□ 3.59
CTDNEP1-201ENST00000318988 XIRP1Q702N8 1843 aaKnown RBP37.46■■■■□ 3.59
CTDNEP1-201ENST00000318988 ESCO1Q5FWF5 840 aa37.46■■■■□ 3.59
CTDNEP1-201ENST00000318988 NGDNQ8NEJ9 315 aaKnown RBP37.46■■■■□ 3.59
CTDNEP1-201ENST00000318988 PMFBP1Q8TBY8 1022 aa37.46■■■■□ 3.59
CTDNEP1-201ENST00000318988 CD163L1Q9NR16 1453 aa37.45■■■■□ 3.59
CTDNEP1-201ENST00000318988 ACEP12821 1306 aa37.44■■■■□ 3.58
CTDNEP1-201ENST00000318988 MIER1Q8N108 512 aa37.44■■■■□ 3.58
CTDNEP1-201ENST00000318988 KTN1Q86UP2 1357 aaKnown RBP37.44■■■■□ 3.58
CTDNEP1-201ENST00000318988 LTBP4Q8N2S1 1624 aa37.43■■■■□ 3.58
CTDNEP1-201ENST00000318988 PHF8Q9UPP1 1060 aa37.43■■■■□ 3.58
CTDNEP1-201ENST00000318988 CPSF1Q10570 1443 aaKnown RBP37.43■■■■□ 3.58
CTDNEP1-201ENST00000318988 CGNL1Q0VF96 1302 aa37.41■■■■□ 3.58
CTDNEP1-201ENST00000318988 RGPD8O14715 1765 aaPredicted RBP37.41■■■■□ 3.58
CTDNEP1-201ENST00000318988 C1orf167Q5SNV9 1468 aa37.4■■■■□ 3.58
CTDNEP1-201ENST00000318988 CC2D1BQ5T0F9 858 aaKnown RBP37.39■■■■□ 3.58
CTDNEP1-201ENST00000318988 MST1RQ04912 1400 aa37.39■■■■□ 3.58
CTDNEP1-201ENST00000318988 AMER1Q5JTC6 1135 aaPredicted RBP37.38■■■■□ 3.57
CTDNEP1-201ENST00000318988 PRKRIP1Q9H875 184 aaPredicted RBP37.37■■■■□ 3.57
CTDNEP1-201ENST00000318988 POLR3AO14802 1390 aaPredicted RBP37.37■■■■□ 3.57
CTDNEP1-201ENST00000318988 NPC1L1Q9UHC9 1359 aa37.35■■■■□ 3.57
CTDNEP1-201ENST00000318988 ORAI2Q96SN7 254 aa37.35■■■■□ 3.57
CTDNEP1-201ENST00000318988 EDC4Q6P2E9 1401 aaKnown RBP37.34■■■■□ 3.57
CTDNEP1-201ENST00000318988 RALBP1Q15311 655 aa37.33■■■■□ 3.57
CTDNEP1-201ENST00000318988 AKAP12Q02952 1782 aa37.31■■■■□ 3.56
CTDNEP1-201ENST00000318988 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.31■■■■□ 3.56
CTDNEP1-201ENST00000318988 SLAIN2Q9P270 581 aa37.31■■■■□ 3.56
CTDNEP1-201ENST00000318988 USP6P35125 1406 aa37.3■■■■□ 3.56
CTDNEP1-201ENST00000318988 NSD2O96028 1365 aa37.28■■■■□ 3.56
CTDNEP1-201ENST00000318988 PSME1Q06323 249 aa37.27■■■■□ 3.56
CTDNEP1-201ENST00000318988 MON2Q7Z3U7 1717 aa37.27■■■■□ 3.56
CTDNEP1-201ENST00000318988 KIF1AQ12756 1690 aa37.25■■■■□ 3.55
CTDNEP1-201ENST00000318988 PARD3Q8TEW0 1356 aa37.24■■■■□ 3.55
CTDNEP1-201ENST00000318988 TTC21BQ7Z4L5 1316 aa37.23■■■■□ 3.55
CTDNEP1-201ENST00000318988 FOXO3O43524 673 aa37.23■■■■□ 3.55
CTDNEP1-201ENST00000318988 FYB1O15117 783 aa37.22■■■■□ 3.55
CTDNEP1-201ENST00000318988 MORC1Q86VD1 984 aa37.22■■■■□ 3.55
CTDNEP1-201ENST00000318988 BRD4O60885 1362 aaPredicted RBP37.21■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms