RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 E9PCH4 1651 aa11.11□□□□□ -0.63
PDLIM5-201ENST00000317968 ATF3P18847 181 aa11.11□□□□□ -0.63
PDLIM5-201ENST00000317968 DMRT2Q9Y5R5 561 aa11.11□□□□□ -0.63
PDLIM5-201ENST00000317968 PIK3C2GO75747 1445 aa11.1□□□□□ -0.63
PDLIM5-201ENST00000317968 CAMSAP1Q5T5Y3 1602 aa11.1□□□□□ -0.63
PDLIM5-201ENST00000317968 WASLO00401 505 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-201ENST00000317968 U2SURPO15042 1029 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-201ENST00000317968 CABP2Q9NPB3 220 aa11.09□□□□□ -0.63
PDLIM5-201ENST00000317968 CLTCL1P53675 1640 aa11.09□□□□□ -0.63
PDLIM5-201ENST00000317968 PIK3R4Q99570 1358 aa11.09□□□□□ -0.63
PDLIM5-201ENST00000317968 C11orf95C9JLR9 678 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-201ENST00000317968 U2AF1L5P0DN76 240 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-201ENST00000317968 U2AF1Q01081 240 aaKnown RBP eCLIP11.09□□□□□ -0.631e-7■■■■■ 28.2
PDLIM5-201ENST00000317968 ANKRD36BQ8N2N9 1353 aa11.09□□□□□ -0.63
PDLIM5-201ENST00000317968 BCORL1Q5H9F3 1711 aa11.08□□□□□ -0.64
PDLIM5-201ENST00000317968 PPP2R1AP30153 589 aa11.08□□□□□ -0.64
PDLIM5-201ENST00000317968 PLEKHG1Q9ULL1 1385 aa11.08□□□□□ -0.64
PDLIM5-201ENST00000317968 INSRP06213 1382 aa11.08□□□□□ -0.64
PDLIM5-201ENST00000317968 RICTORQ6R327 1708 aa11.08□□□□□ -0.64
PDLIM5-201ENST00000317968 DISP3Q9P2K9 1392 aa11.08□□□□□ -0.64
PDLIM5-201ENST00000317968 FKBP8Q14318 412 aa11.08□□□□□ -0.64
PDLIM5-201ENST00000317968 CEBPAP49715 358 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-201ENST00000317968 PPRC1Q5VV67 1664 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-201ENST00000317968 SETBP1Q9Y6X0 1596 aa11.07□□□□□ -0.64
PDLIM5-201ENST00000317968 TNNT2P45379 298 aaPredicted RBP11.07□□□□□ -0.64
PDLIM5-201ENST00000317968 SLC12A5Q9H2X9 1139 aa11.07□□□□□ -0.64
PDLIM5-201ENST00000317968 SYNMO15061 1565 aa11.07□□□□□ -0.64
PDLIM5-201ENST00000317968 GOLGA2Q08379 1002 aa11.07□□□□□ -0.64
PDLIM5-201ENST00000317968 AMOTL2Q9Y2J4 779 aa11.07□□□□□ -0.64
PDLIM5-201ENST00000317968 HMGB2P26583 209 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-201ENST00000317968 EVA1CP58658 441 aa11.06□□□□□ -0.64
PDLIM5-201ENST00000317968 NUDT16Q96DE0 195 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-201ENST00000317968 SLC26A8Q96RN1 970 aa11.06□□□□□ -0.64
PDLIM5-201ENST00000317968 FRMPD1Q5SYB0 1578 aa11.06□□□□□ -0.64
PDLIM5-201ENST00000317968 DIAPH1O60610 1272 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-201ENST00000317968 ASXL1Q8IXJ9 1541 aa11.06□□□□□ -0.64
PDLIM5-201ENST00000317968 PROSER2Q86WR7 435 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-201ENST00000317968 NSD3Q9BZ95 1437 aa11.06□□□□□ -0.64
PDLIM5-201ENST00000317968 PNISRQ8TF01 805 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-201ENST00000317968 CEP152O94986 1710 aa11.05□□□□□ -0.64
PDLIM5-201ENST00000317968 KIAA1210Q9ULL0 1709 aa11.05□□□□□ -0.64
PDLIM5-201ENST00000317968 PSME1Q06323 249 aa11.05□□□□□ -0.64
PDLIM5-201ENST00000317968 RTF1Q92541 710 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-201ENST00000317968 PARD3Q8TEW0 1356 aa11.05□□□□□ -0.64
PDLIM5-201ENST00000317968 FAM135BQ49AJ0 1406 aa11.05□□□□□ -0.64
PDLIM5-201ENST00000317968 CABP1Q9NZU7 370 aa11.04□□□□□ -0.64
PDLIM5-201ENST00000317968 SALL2Q9Y467 1007 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-201ENST00000317968 RUNDC1Q96C34 613 aa11.04□□□□□ -0.64
PDLIM5-201ENST00000317968 A2ML1A8K2U0 1454 aa11.04□□□□□ -0.64
PDLIM5-201ENST00000317968 TRPM1Q7Z4N2 1603 aa11.04□□□□□ -0.64
PDLIM5-201ENST00000317968 SF3B2Q13435 895 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-201ENST00000317968 E9PSI1 815 aa11.03□□□□□ -0.64
PDLIM5-201ENST00000317968 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.03□□□□□ -0.64
PDLIM5-201ENST00000317968 AMPHP49418 695 aa11.03□□□□□ -0.64
PDLIM5-201ENST00000317968 TTC21AQ8NDW8 1320 aa11.03□□□□□ -0.64
PDLIM5-201ENST00000317968 SPATA31D1Q6ZQQ2 1576 aa11.03□□□□□ -0.64
PDLIM5-201ENST00000317968 UGGT1Q9NYU2 1555 aa11.03□□□□□ -0.64
PDLIM5-201ENST00000317968 MADDQ8WXG6 1647 aa11.03□□□□□ -0.64
PDLIM5-201ENST00000317968 MROH1Q8NDA8 1641 aa11.02□□□□□ -0.65
PDLIM5-201ENST00000317968 NRXN1Q9ULB1 1477 aa11.02□□□□□ -0.65
PDLIM5-201ENST00000317968 EIF5BO60841 1220 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-201ENST00000317968 PPP4R2Q9NY27 417 aa11.01□□□□□ -0.65
PDLIM5-201ENST00000317968 CCDC136Q96JN2 1154 aa11.01□□□□□ -0.65
PDLIM5-201ENST00000317968 AMER1Q5JTC6 1135 aaPredicted RBP11.01□□□□□ -0.65
PDLIM5-201ENST00000317968 PER1O15534 1290 aaPredicted RBP11□□□□□ -0.65
PDLIM5-201ENST00000317968 IPO8O15397 1037 aaKnown RBP11□□□□□ -0.65
PDLIM5-201ENST00000317968 MTHFSP49914 203 aa11□□□□□ -0.65
PDLIM5-201ENST00000317968 WAPLQ7Z5K2 1190 aa10.99□□□□□ -0.65
PDLIM5-201ENST00000317968 GGNBP2Q9H3C7 697 aa10.99□□□□□ -0.65
PDLIM5-201ENST00000317968 RCAN3Q9UKA8 241 aa10.99□□□□□ -0.65
PDLIM5-201ENST00000317968 SUPT16HQ9Y5B9 1047 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-201ENST00000317968 SOX12O15370 315 aa10.99□□□□□ -0.65
PDLIM5-201ENST00000317968 KDM5AP29375 1690 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-201ENST00000317968 KCNH5Q8NCM2 988 aa10.99□□□□□ -0.65
PDLIM5-201ENST00000317968 KCNA6P17658 529 aa10.98□□□□□ -0.65
PDLIM5-201ENST00000317968 NCBP3Q53F19 620 aaKnown RBP10.98□□□□□ -0.65
PDLIM5-201ENST00000317968 POLR3AO14802 1390 aaPredicted RBP10.98□□□□□ -0.65
PDLIM5-201ENST00000317968 UPF2Q9HAU5 1272 aaKnown RBP10.98□□□□□ -0.65
PDLIM5-201ENST00000317968 CADPS2Q86UW7 1296 aa10.98□□□□□ -0.65
PDLIM5-201ENST00000317968 DLC1Q96QB1 1528 aa10.98□□□□□ -0.65
PDLIM5-201ENST00000317968 AAMPQ13685 434 aa10.98□□□□□ -0.65
PDLIM5-201ENST00000317968 CT47B1P0C2W7 299 aaPredicted RBP10.97□□□□□ -0.65
PDLIM5-201ENST00000317968 PREX1Q8TCU6 1659 aa10.97□□□□□ -0.65
PDLIM5-201ENST00000317968 NLRP6P59044 892 aa10.97□□□□□ -0.65
PDLIM5-201ENST00000317968 CFAP65Q6ZU64 1925 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-201ENST00000317968 NEUROD2Q15784 382 aa10.97□□□□□ -0.65
PDLIM5-201ENST00000317968 CLTCQ00610 1675 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-201ENST00000317968 PHF8Q9UPP1 1060 aa10.96□□□□□ -0.65
PDLIM5-201ENST00000317968 NEXMIFQ5QGS0 1516 aa10.96□□□□□ -0.65
PDLIM5-201ENST00000317968 FCHSD2O94868 740 aa10.96□□□□□ -0.65
PDLIM5-201ENST00000317968 PLEKHG3A1L390 1219 aa10.95□□□□□ -0.66
PDLIM5-201ENST00000317968 EDC4Q6P2E9 1401 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-201ENST00000317968 NUTM2FA1L443 756 aa10.95□□□□□ -0.66
PDLIM5-201ENST00000317968 WDR63Q8IWG1 891 aa10.95□□□□□ -0.66
PDLIM5-201ENST00000317968 TTC21BQ7Z4L5 1316 aa10.95□□□□□ -0.66
PDLIM5-201ENST00000317968 ADAMTS8Q9UP79 889 aa10.95□□□□□ -0.66
PDLIM5-201ENST00000317968 PPIP5K1Q6PFW1 1433 aa10.94□□□□□ -0.66
PDLIM5-201ENST00000317968 ATP7BP35670 1465 aa10.94□□□□□ -0.66
PDLIM5-201ENST00000317968 SMG6Q86US8 1419 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-201ENST00000317968 APAF1O14727 1248 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms