RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 C19orf44Q9H6X5 657 aa21.64■■□□□ 1.05
HNF4A-202ENST00000316673 CENPJQ9HC77 1338 aaPredicted RBP21.63■■□□□ 1.05
HNF4A-202ENST00000316673 MSH6P52701 1360 aa21.63■■□□□ 1.05
HNF4A-202ENST00000316673 ADGRL3Q9HAR2 1447 aa21.63■■□□□ 1.05
HNF4A-202ENST00000316673 SLC24A1O60721 1099 aa21.63■■□□□ 1.05
HNF4A-202ENST00000316673 EIF4G2P78344 907 aaKnown RBP eCLIP21.62■■□□□ 1.05
HNF4A-202ENST00000316673 DCCP43146 1447 aa21.62■■□□□ 1.05
HNF4A-202ENST00000316673 USP47Q96K76 1375 aa21.61■■□□□ 1.05
HNF4A-202ENST00000316673 XIRP1Q702N8 1843 aaKnown RBP21.61■■□□□ 1.05
HNF4A-202ENST00000316673 PLEKHH1Q9ULM0 1364 aa21.6■■□□□ 1.05
HNF4A-202ENST00000316673 RBM33Q96EV2 1170 aaKnown RBP21.58■■□□□ 1.05
HNF4A-202ENST00000316673 SBNO2Q9Y2G9 1366 aa21.58■■□□□ 1.04
HNF4A-202ENST00000316673 UBAP1LF5GYI3 381 aa21.58■■□□□ 1.04
HNF4A-202ENST00000316673 SAFB2Q14151 953 aaKnown RBP eCLIP21.58■■□□□ 1.04
HNF4A-202ENST00000316673 CADPS2Q86UW7 1296 aa21.58■■□□□ 1.04
HNF4A-202ENST00000316673 ATF3P18847 181 aa21.57■■□□□ 1.04
HNF4A-202ENST00000316673 NALCNQ8IZF0 1738 aa21.56■■□□□ 1.04
HNF4A-202ENST00000316673 ADGRB2O60241 1585 aa21.56■■□□□ 1.04
HNF4A-202ENST00000316673 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.56■■□□□ 1.04
HNF4A-202ENST00000316673 CDC42BPGQ6DT37 1551 aa21.55■■□□□ 1.04
HNF4A-202ENST00000316673 QRICH2Q9H0J4 1663 aa21.55■■□□□ 1.04
HNF4A-202ENST00000316673 MINK1Q8N4C8 1332 aaPredicted RBP21.54■■□□□ 1.04
HNF4A-202ENST00000316673 ST20-MTHFSA0A0A6YYL1 179 aa21.53■■□□□ 1.04
HNF4A-202ENST00000316673 TOM1O60784 492 aa21.53■■□□□ 1.04
HNF4A-202ENST00000316673 EVC2Q86UK5 1308 aa21.5■■□□□ 1.03
HNF4A-202ENST00000316673 WASLO00401 505 aaPredicted RBP21.5■■□□□ 1.03
HNF4A-202ENST00000316673 DIEXFQ68CQ4 756 aaKnown RBP21.5■■□□□ 1.03
HNF4A-202ENST00000316673 HIRIP3Q9BW71 556 aaPredicted RBP21.49■■□□□ 1.03
HNF4A-202ENST00000316673 HSPA5P11021 654 aaKnown RBP21.48■■□□□ 1.03
HNF4A-202ENST00000316673 TESK2Q96S53 571 aa21.47■■□□□ 1.03
HNF4A-202ENST00000316673 SLAIN2Q9P270 581 aa21.47■■□□□ 1.03
HNF4A-202ENST00000316673 ANKARQ7Z5J8 1434 aa21.46■■□□□ 1.03
HNF4A-202ENST00000316673 TMF1P82094 1093 aa21.45■■□□□ 1.03
HNF4A-202ENST00000316673 CDK19Q9BWU1 502 aa21.45■■□□□ 1.03
HNF4A-202ENST00000316673 FMN2Q9NZ56 1722 aa21.45■■□□□ 1.03
HNF4A-202ENST00000316673 MST1RQ04912 1400 aa21.45■■□□□ 1.02
HNF4A-202ENST00000316673 CDCA8Q53HL2 280 aa21.45■■□□□ 1.02
HNF4A-202ENST00000316673 PUS7Q96PZ0 661 aaKnown RBP21.45■■□□□ 1.02
HNF4A-202ENST00000316673 TULP4Q9NRJ4 1543 aa21.44■■□□□ 1.02
HNF4A-202ENST00000316673 SRPK2P78362 688 aaKnown RBP21.43■■□□□ 1.02
HNF4A-202ENST00000316673 C1orf167Q5SNV9 1468 aa21.42■■□□□ 1.02
HNF4A-202ENST00000316673 ATAD2Q6PL18 1390 aa21.4■■□□□ 1.02
HNF4A-202ENST00000316673 SCAF1Q9H7N4 1312 aaKnown RBP21.39■■□□□ 1.02
HNF4A-202ENST00000316673 NUDT16Q96DE0 195 aaKnown RBP21.39■■□□□ 1.01
HNF4A-202ENST00000316673 CCDC61Q9Y6R9 512 aa21.39■■□□□ 1.01
HNF4A-202ENST00000316673 ITSN1Q15811 1721 aa21.37■■□□□ 1.01
HNF4A-202ENST00000316673 ATP7BP35670 1465 aa21.37■■□□□ 1.01
HNF4A-202ENST00000316673 NUTM2FA1L443 756 aa21.37■■□□□ 1.01
HNF4A-202ENST00000316673 PIP4K2BP78356 416 aa21.37■■□□□ 1.01
HNF4A-202ENST00000316673 CABP2Q9NPB3 220 aa21.37■■□□□ 1.01
HNF4A-202ENST00000316673 ESCO1Q5FWF5 840 aa21.36■■□□□ 1.01
HNF4A-202ENST00000316673 HSPA1LP34931 641 aa21.35■■□□□ 1.01
HNF4A-202ENST00000316673 USP32Q8NFA0 1604 aa21.34■■□□□ 1.01
HNF4A-202ENST00000316673 PRR36Q9H6K5 1346 aa21.34■■□□□ 1.01
HNF4A-202ENST00000316673 BRINP3Q76B58 766 aa21.34■■□□□ 1.01
HNF4A-202ENST00000316673 KIF1AQ12756 1690 aa21.34■■□□□ 1.01
HNF4A-202ENST00000316673 NINLQ9Y2I6 1382 aa21.34■■□□□ 1.01
HNF4A-202ENST00000316673 ROBO1Q9Y6N7 1651 aa21.33■■□□□ 1
HNF4A-202ENST00000316673 ORAI2Q96SN7 254 aa21.32■■□□□ 1
HNF4A-202ENST00000316673 PHF8Q9UPP1 1060 aa21.32■■□□□ 1
HNF4A-202ENST00000316673 RGPD8O14715 1765 aaPredicted RBP21.32■■□□□ 1
HNF4A-202ENST00000316673 TOPAZ1Q8N9V7 1692 aa21.31■■□□□ 1
HNF4A-202ENST00000316673 PLEKHG3A1L390 1219 aa21.31■■□□□ 1
HNF4A-202ENST00000316673 PPIP5K1Q6PFW1 1433 aa21.31■■□□□ 1
HNF4A-202ENST00000316673 NPHP3Q7Z494 1330 aa21.29■■□□□ 1
HNF4A-202ENST00000316673 CCDC7Q96M83 1385 aa21.28■■□□□ 1
HNF4A-202ENST00000316673 NGDNQ8NEJ9 315 aaKnown RBP21.27■■□□□ 1
HNF4A-202ENST00000316673 CABP1Q9NZU7 370 aa21.27■■□□□ 1
HNF4A-202ENST00000316673 POLR3AO14802 1390 aaPredicted RBP21.26■□□□□ 0.99
HNF4A-202ENST00000316673 MED1Q15648 1581 aaPredicted RBP21.26■□□□□ 0.99
HNF4A-202ENST00000316673 DDX10Q13206 875 aaKnown RBP21.26■□□□□ 0.99
HNF4A-202ENST00000316673 PMFBP1Q8TBY8 1022 aa21.26■□□□□ 0.99
HNF4A-202ENST00000316673 TMC1Q8TDI8 760 aa21.26■□□□□ 0.99
HNF4A-202ENST00000316673 ZNF692Q9BU19 519 aaPredicted RBP21.26■□□□□ 0.99
HNF4A-202ENST00000316673 AHDC1Q5TGY3 1603 aaPredicted RBP21.26■□□□□ 0.99
HNF4A-202ENST00000316673 FOXO3O43524 673 aa21.25■□□□□ 0.99
HNF4A-202ENST00000316673 TERF2IPQ9NYB0 399 aa21.25■□□□□ 0.99
HNF4A-202ENST00000316673 WASHC2AQ641Q2 1341 aa21.24■□□□□ 0.99
HNF4A-202ENST00000316673 NHSL1Q5SYE7 1610 aa21.24■□□□□ 0.99
HNF4A-202ENST00000316673 PSME1Q06323 249 aa21.24■□□□□ 0.99
HNF4A-202ENST00000316673 ACEP12821 1306 aa21.24■□□□□ 0.99
HNF4A-202ENST00000316673 BRD4O60885 1362 aaPredicted RBP21.23■□□□□ 0.99
HNF4A-202ENST00000316673 KIF7Q2M1P5 1343 aa21.23■□□□□ 0.99
HNF4A-202ENST00000316673 C11orf95C9JLR9 678 aaPredicted RBP21.22■□□□□ 0.99
HNF4A-202ENST00000316673 HDGFL2Q7Z4V5 671 aaPredicted RBP21.22■□□□□ 0.99
HNF4A-202ENST00000316673 POLR3GLQ9BT43 218 aa21.22■□□□□ 0.99
HNF4A-202ENST00000316673 SLC12A5Q9H2X9 1139 aa21.21■□□□□ 0.99
HNF4A-202ENST00000316673 SOS2Q07890 1332 aaPredicted RBP21.21■□□□□ 0.99
HNF4A-202ENST00000316673 CPSF1Q10570 1443 aaKnown RBP21.2■□□□□ 0.98
HNF4A-202ENST00000316673 KRT28Q7Z3Y7 464 aa21.2■□□□□ 0.98
HNF4A-202ENST00000316673 PHF23Q9BUL5 403 aaPredicted RBP21.2■□□□□ 0.98
HNF4A-202ENST00000316673 ANKRD36BQ8N2N9 1353 aa21.19■□□□□ 0.98
HNF4A-202ENST00000316673 PHLPP1O60346 1717 aa21.19■□□□□ 0.98
HNF4A-202ENST00000316673 LRRC59Q96AG4 307 aaKnown RBP21.18■□□□□ 0.98
HNF4A-202ENST00000316673 SBNO1A3KN83 1393 aa21.18■□□□□ 0.98
HNF4A-202ENST00000316673 PXDNQ92626 1479 aa21.18■□□□□ 0.98
HNF4A-202ENST00000316673 KTN1Q86UP2 1357 aaKnown RBP21.17■□□□□ 0.98
HNF4A-202ENST00000316673 USP6P35125 1406 aa21.17■□□□□ 0.98
HNF4A-202ENST00000316673 MYOM1P52179 1685 aa21.17■□□□□ 0.98
HNF4A-202ENST00000316673 AKAP12Q02952 1782 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms