RNA–Protein interactions for RNA: ENST00000316341.7

SLC12A4-201, Transcript of solute carrier family 12 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC12A4, Length 4,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-201ENST00000316341 STAC3Q96MF2 364 aa22.36■■□□□ 1.17
SLC12A4-201ENST00000316341 BCL11BQ9C0K0 894 aaPredicted RBP22.36■■□□□ 1.17
SLC12A4-201ENST00000316341 ARHGAP5Q13017 1502 aa22.36■■□□□ 1.17
SLC12A4-201ENST00000316341 TMEM57Q8N5G2 664 aa22.35■■□□□ 1.17
SLC12A4-201ENST00000316341 COG3Q96JB2 828 aa22.35■■□□□ 1.17
SLC12A4-201ENST00000316341 GNAI1P63096 354 aa22.35■■□□□ 1.17
SLC12A4-201ENST00000316341 NKTRP30414 1462 aaKnown RBP22.34■■□□□ 1.17
SLC12A4-201ENST00000316341 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.34■■□□□ 1.17
SLC12A4-201ENST00000316341 CHD1LQ86WJ1 897 aa22.34■■□□□ 1.17
SLC12A4-201ENST00000316341 K7ELQ4 463 aaPredicted RBP22.33■■□□□ 1.17
SLC12A4-201ENST00000316341 NEK4P51957 841 aa22.33■■□□□ 1.17
SLC12A4-201ENST00000316341 PANK2Q9BZ23 570 aa22.33■■□□□ 1.17
SLC12A4-201ENST00000316341 SEC24BO95487 1268 aa22.32■■□□□ 1.16
SLC12A4-201ENST00000316341 CCDC173Q0VFZ6 552 aa22.32■■□□□ 1.16
SLC12A4-201ENST00000316341 AMPHP49418 695 aa22.31■■□□□ 1.16
SLC12A4-201ENST00000316341 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.31■■□□□ 1.16
SLC12A4-201ENST00000316341 HSP90B1P14625 803 aaKnown RBP22.31■■□□□ 1.16
SLC12A4-201ENST00000316341 ARHGEF11O15085 1522 aa22.31■■□□□ 1.16
SLC12A4-201ENST00000316341 NINLQ9Y2I6 1382 aa22.31■■□□□ 1.16
SLC12A4-201ENST00000316341 SSH1Q8WYL5 1049 aa22.3■■□□□ 1.16
SLC12A4-201ENST00000316341 DNAJC5BQ9UF47 199 aa22.3■■□□□ 1.16
SLC12A4-201ENST00000316341 PLB1Q6P1J6 1458 aa22.3■■□□□ 1.16
SLC12A4-201ENST00000316341 CSPP1Q1MSJ5 1256 aa22.3■■□□□ 1.16
SLC12A4-201ENST00000316341 PCDHB15Q9Y5E8 787 aa22.3■■□□□ 1.16
SLC12A4-201ENST00000316341 TNNQ9UQP3 1299 aa22.29■■□□□ 1.16
SLC12A4-201ENST00000316341 FKBP5Q13451 457 aaPredicted RBP22.28■■□□□ 1.16
SLC12A4-201ENST00000316341 THOC2Q8NI27 1593 aaKnown RBP22.28■■□□□ 1.16
SLC12A4-201ENST00000316341 ZNF592Q92610 1267 aa22.28■■□□□ 1.16
SLC12A4-201ENST00000316341 TPM2P07951 284 aa22.28■■□□□ 1.16
SLC12A4-201ENST00000316341 TBC1D32Q96NH3 1257 aa22.28■■□□□ 1.16
SLC12A4-201ENST00000316341 VPS37CA5D8V6 355 aaPredicted RBP22.27■■□□□ 1.16
SLC12A4-201ENST00000316341 RNF123Q5XPI4 1314 aa22.27■■□□□ 1.16
SLC12A4-201ENST00000316341 RABEP1Q15276 862 aa22.27■■□□□ 1.16
SLC12A4-201ENST00000316341 TWISTNBQ3B726 338 aaPredicted RBP22.27■■□□□ 1.16
SLC12A4-201ENST00000316341 THUMPD2Q9BTF0 503 aaKnown RBP22.27■■□□□ 1.16
SLC12A4-201ENST00000316341 CCDC9Q9Y3X0 531 aaKnown RBP22.27■■□□□ 1.16
SLC12A4-201ENST00000316341 XRCC6P12956 609 aaKnown RBP eCLIP22.26■■□□□ 1.15
SLC12A4-201ENST00000316341 GCC1Q96CN9 775 aa22.26■■□□□ 1.15
SLC12A4-201ENST00000316341 PARD3Q8TEW0 1356 aa22.26■■□□□ 1.15
SLC12A4-201ENST00000316341 EIF2S2P20042 333 aaKnown RBP22.26■■□□□ 1.15
SLC12A4-201ENST00000316341 TNPO1Q92973 898 aaKnown RBP22.26■■□□□ 1.15
SLC12A4-201ENST00000316341 NSD3Q9BZ95 1437 aa22.25■■□□□ 1.15
SLC12A4-201ENST00000316341 PLEKHH1Q9ULM0 1364 aa22.25■■□□□ 1.15
SLC12A4-201ENST00000316341 UGGT2Q9NYU1 1516 aa22.25■■□□□ 1.15
SLC12A4-201ENST00000316341 IQGAP2Q13576 1575 aa22.25■■□□□ 1.15
SLC12A4-201ENST00000316341 NGDNQ8NEJ9 315 aaKnown RBP22.25■■□□□ 1.15
SLC12A4-201ENST00000316341 PLEKHH2Q8IVE3 1493 aa22.25■■□□□ 1.15
SLC12A4-201ENST00000316341 HDGFP51858 240 aaKnown RBP22.25■■□□□ 1.15
SLC12A4-201ENST00000316341 ATP6V1DQ9Y5K8 247 aa22.25■■□□□ 1.15
SLC12A4-201ENST00000316341 UNC13AQ9UPW8 1703 aa22.24■■□□□ 1.15
SLC12A4-201ENST00000316341 CCDC27Q2M243 656 aa22.24■■□□□ 1.15
SLC12A4-201ENST00000316341 DIAPH3Q9NSV4 1193 aa22.24■■□□□ 1.15
SLC12A4-201ENST00000316341 TMPOP42166 694 aaKnown RBP22.23■■□□□ 1.15
SLC12A4-201ENST00000316341 SPINK5Q9NQ38 1064 aaPredicted RBP22.23■■□□□ 1.15
SLC12A4-201ENST00000316341 SYNJ2O15056 1496 aa22.23■■□□□ 1.15
SLC12A4-201ENST00000316341 GPATCH3Q96I76 525 aa22.23■■□□□ 1.15
SLC12A4-201ENST00000316341 SSFA2P28290 1259 aa22.23■■□□□ 1.15
SLC12A4-201ENST00000316341 CCDC39Q9UFE4 941 aa22.23■■□□□ 1.15
SLC12A4-201ENST00000316341 HTATSF1O43719 755 aaKnown RBP22.22■■□□□ 1.15
SLC12A4-201ENST00000316341 TRIM27P14373 513 aa22.22■■□□□ 1.15
SLC12A4-201ENST00000316341 ISY1Q9ULR0 285 aaKnown RBP22.22■■□□□ 1.15
SLC12A4-201ENST00000316341 CUL7Q14999 1698 aa22.22■■□□□ 1.15
SLC12A4-201ENST00000316341 RRP9O43818 475 aaKnown RBP22.21■■□□□ 1.15
SLC12A4-201ENST00000316341 SMC3Q9UQE7 1217 aa22.21■■□□□ 1.15
SLC12A4-201ENST00000316341 GNL2Q13823 731 aaKnown RBP22.21■■□□□ 1.15
SLC12A4-201ENST00000316341 CIZ1Q9ULV3 898 aaPredicted RBP22.21■■□□□ 1.15
SLC12A4-201ENST00000316341 PER1O15534 1290 aaPredicted RBP22.21■■□□□ 1.15
SLC12A4-201ENST00000316341 SCAPERQ9BY12 1400 aa22.2■■□□□ 1.14
SLC12A4-201ENST00000316341 SNAPC4Q5SXM2 1469 aa22.2■■□□□ 1.14
SLC12A4-201ENST00000316341 TSPYL4Q9UJ04 414 aa22.2■■□□□ 1.14
SLC12A4-201ENST00000316341 CC2D2AQ9P2K1 1620 aa22.19■■□□□ 1.14
SLC12A4-201ENST00000316341 PRAM1Q96QH2 718 aa22.18■■□□□ 1.14
SLC12A4-201ENST00000316341 RALGAPBQ86X10 1494 aa22.18■■□□□ 1.14
SLC12A4-201ENST00000316341 ZSCAN30Q86W11 494 aa22.18■■□□□ 1.14
SLC12A4-201ENST00000316341 H3BQV1 296 aa22.17■■□□□ 1.14
SLC12A4-201ENST00000316341 RLBP1P12271 317 aa22.17■■□□□ 1.14
SLC12A4-201ENST00000316341 IFFO2Q5TF58 517 aa22.17■■□□□ 1.14
SLC12A4-201ENST00000316341 TESK2Q96S53 571 aa22.17■■□□□ 1.14
SLC12A4-201ENST00000316341 KIAA0586Q9BVV6 1533 aa22.17■■□□□ 1.14
SLC12A4-201ENST00000316341 GOLGA6L19H0YKK7 550 aa22.17■■□□□ 1.14
SLC12A4-201ENST00000316341 FIBPO43427 364 aa22.17■■□□□ 1.14
SLC12A4-201ENST00000316341 MBD3O95983 291 aa22.17■■□□□ 1.14
SLC12A4-201ENST00000316341 BECN2A8MW95 431 aa22.16■■□□□ 1.14
SLC12A4-201ENST00000316341 CT47B1P0C2W7 299 aaPredicted RBP22.16■■□□□ 1.14
SLC12A4-201ENST00000316341 TSPY26PQ9H489 355 aa22.16■■□□□ 1.14
SLC12A4-201ENST00000316341 CABP1Q9NZU7 370 aa22.16■■□□□ 1.14
SLC12A4-201ENST00000316341 UQCRHLA0A096LP55 91 aa22.16■■□□□ 1.14
SLC12A4-201ENST00000316341 UQCRHP07919 91 aa22.16■■□□□ 1.14
SLC12A4-201ENST00000316341 FBXW7Q969H0 707 aa22.16■■□□□ 1.14
SLC12A4-201ENST00000316341 SYCE3A1L190 88 aa22.16■■□□□ 1.14
SLC12A4-201ENST00000316341 ZNF771Q7L3S4 317 aaPredicted RBP22.16■■□□□ 1.14
SLC12A4-201ENST00000316341 ZNF330Q9Y3S2 320 aaPredicted RBP22.15■■□□□ 1.14
SLC12A4-201ENST00000316341 ADGRF5Q8IZF2 1346 aa22.15■■□□□ 1.14
SLC12A4-201ENST00000316341 CFAP43Q8NDM7 1665 aa22.15■■□□□ 1.14
SLC12A4-201ENST00000316341 BICD2Q8TD16 824 aa22.14■■□□□ 1.14
SLC12A4-201ENST00000316341 GPRASP1Q5JY77 1395 aa22.14■■□□□ 1.14
SLC12A4-201ENST00000316341 UBE2Q2Q8WVN8 375 aa22.14■■□□□ 1.13
SLC12A4-201ENST00000316341 IFT57Q9NWB7 429 aa22.14■■□□□ 1.13
SLC12A4-201ENST00000316341 XPCQ01831 940 aaPredicted RBP22.14■■□□□ 1.13
SLC12A4-201ENST00000316341 FOSBP53539 338 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms