RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 ARHGEF28Q8N1W1 1705 aaKnown RBP9.44□□□□□ -0.9
LYSMD3-201ENST00000315948 BRD4O60885 1362 aaPredicted RBP9.44□□□□□ -0.9
LYSMD3-201ENST00000315948 SETBP1Q9Y6X0 1596 aa9.44□□□□□ -0.9
LYSMD3-201ENST00000315948 PPP6R1Q9UPN7 881 aa9.44□□□□□ -0.9
LYSMD3-201ENST00000315948 ZBED9Q6R2W3 1325 aa9.44□□□□□ -0.9
LYSMD3-201ENST00000315948 KDM5AP29375 1690 aaKnown RBP9.43□□□□□ -0.9
LYSMD3-201ENST00000315948 LRPPRCP42704 1394 aaKnown RBP9.43□□□□□ -0.9
LYSMD3-201ENST00000315948 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.43□□□□□ -0.9
LYSMD3-201ENST00000315948 EVC2Q86UK5 1308 aa9.42□□□□□ -0.9
LYSMD3-201ENST00000315948 ZRANB1Q9UGI0 708 aa9.42□□□□□ -0.9
LYSMD3-201ENST00000315948 TMEM2Q9UHN6 1383 aa9.42□□□□□ -0.9
LYSMD3-201ENST00000315948 A0A1W2PP64 1363 aa9.42□□□□□ -0.9
LYSMD3-201ENST00000315948 NRXN3Q9Y4C0 1643 aa9.41□□□□□ -0.9
LYSMD3-201ENST00000315948 ROBO2Q9HCK4 1378 aa9.41□□□□□ -0.9
LYSMD3-201ENST00000315948 SBNO2Q9Y2G9 1366 aa9.41□□□□□ -0.9
LYSMD3-201ENST00000315948 MYO3AQ8NEV4 1616 aa9.4□□□□□ -0.9
LYSMD3-201ENST00000315948 MORC1Q86VD1 984 aa9.4□□□□□ -0.9
LYSMD3-201ENST00000315948 DMRT2Q9Y5R5 561 aa9.4□□□□□ -0.91
LYSMD3-201ENST00000315948 RRP7AQ9Y3A4 280 aaKnown RBP9.39□□□□□ -0.91
LYSMD3-201ENST00000315948 MTHFSP49914 203 aa9.39□□□□□ -0.91
LYSMD3-201ENST00000315948 NEUROD2Q15784 382 aa9.39□□□□□ -0.91
LYSMD3-201ENST00000315948 C3P01024 1663 aa9.39□□□□□ -0.91
LYSMD3-201ENST00000315948 ADAMTS13Q76LX8 1427 aa9.38□□□□□ -0.91
LYSMD3-201ENST00000315948 PTPRUQ92729 1446 aa9.38□□□□□ -0.91
LYSMD3-201ENST00000315948 SPINK5Q9NQ38 1064 aaPredicted RBP9.38□□□□□ -0.91
LYSMD3-201ENST00000315948 CD163L1Q9NR16 1453 aa9.38□□□□□ -0.91
LYSMD3-201ENST00000315948 UBR1Q8IWV7 1749 aa9.37□□□□□ -0.91
LYSMD3-201ENST00000315948 PRR36Q9H6K5 1346 aa9.37□□□□□ -0.91
LYSMD3-201ENST00000315948 FYB1O15117 783 aa9.37□□□□□ -0.91
LYSMD3-201ENST00000315948 PPM1GO15355 546 aaPredicted RBP9.37□□□□□ -0.91
LYSMD3-201ENST00000315948 APAF1O14727 1248 aa9.37□□□□□ -0.91
LYSMD3-201ENST00000315948 SOX12O15370 315 aa9.36□□□□□ -0.91
LYSMD3-201ENST00000315948 WDR43Q15061 677 aaKnown RBP eCLIP9.36□□□□□ -0.91
LYSMD3-201ENST00000315948 SETD1AO15047 1707 aaKnown RBP9.36□□□□□ -0.91
LYSMD3-201ENST00000315948 PLIN1O60240 522 aa9.36□□□□□ -0.91
LYSMD3-201ENST00000315948 FER1L4A9Z1Z3 1794 aa9.36□□□□□ -0.91
LYSMD3-201ENST00000315948 PLEKHG5O94827 1062 aa9.36□□□□□ -0.91
LYSMD3-201ENST00000315948 NME9Q86XW9 330 aa9.36□□□□□ -0.91
LYSMD3-201ENST00000315948 AMOTL2Q9Y2J4 779 aa9.36□□□□□ -0.91
LYSMD3-201ENST00000315948 ANKRD36BQ8N2N9 1353 aa9.35□□□□□ -0.91
LYSMD3-201ENST00000315948 NEFLP07196 543 aa9.35□□□□□ -0.91
LYSMD3-201ENST00000315948 CGNL1Q0VF96 1302 aa9.35□□□□□ -0.91
LYSMD3-201ENST00000315948 WASLO00401 505 aaPredicted RBP9.35□□□□□ -0.91
LYSMD3-201ENST00000315948 PMFBP1Q8TBY8 1022 aa9.35□□□□□ -0.91
LYSMD3-201ENST00000315948 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.35□□□□□ -0.91
LYSMD3-201ENST00000315948 NUDCQ9Y266 331 aa9.35□□□□□ -0.91
LYSMD3-201ENST00000315948 ABCC11Q96J66 1382 aa9.34□□□□□ -0.91
LYSMD3-201ENST00000315948 KCNA6P17658 529 aa9.34□□□□□ -0.91
LYSMD3-201ENST00000315948 NUDT16Q96DE0 195 aaKnown RBP9.34□□□□□ -0.91
LYSMD3-201ENST00000315948 B4GALNT3Q6L9W6 998 aa9.34□□□□□ -0.91
LYSMD3-201ENST00000315948 EID1Q9Y6B2 187 aa9.34□□□□□ -0.92
LYSMD3-201ENST00000315948 RIMS1Q86UR5 1692 aaKnown RBP9.33□□□□□ -0.92
LYSMD3-201ENST00000315948 RRS1Q15050 365 aaKnown RBP9.32□□□□□ -0.92
LYSMD3-201ENST00000315948 EMILIN1Q9Y6C2 1016 aa9.32□□□□□ -0.92
LYSMD3-201ENST00000315948 BLMP54132 1417 aaPredicted RBP9.32□□□□□ -0.92
LYSMD3-201ENST00000315948 PPIP5K1Q6PFW1 1433 aa9.32□□□□□ -0.92
LYSMD3-201ENST00000315948 NUTM2GQ5VZR2 741 aa9.32□□□□□ -0.92
LYSMD3-201ENST00000315948 U2SURPO15042 1029 aaKnown RBP9.31□□□□□ -0.92
LYSMD3-201ENST00000315948 THEMISQ8N1K5 641 aaPredicted RBP9.31□□□□□ -0.92
LYSMD3-201ENST00000315948 SMG6Q86US8 1419 aaKnown RBP9.31□□□□□ -0.92
LYSMD3-201ENST00000315948 NPC1L1Q9UHC9 1359 aa9.31□□□□□ -0.92
LYSMD3-201ENST00000315948 PLEKHG1Q9ULL1 1385 aa9.31□□□□□ -0.92
LYSMD3-201ENST00000315948 TERF2IPQ9NYB0 399 aa9.31□□□□□ -0.92
LYSMD3-201ENST00000315948 NLRP1Q9C000 1473 aa9.31□□□□□ -0.92
LYSMD3-201ENST00000315948 U2AF1L5P0DN76 240 aaPredicted RBP9.3□□□□□ -0.92
LYSMD3-201ENST00000315948 HSPA2P54652 639 aa9.3□□□□□ -0.92
LYSMD3-201ENST00000315948 U2AF1Q01081 240 aaKnown RBP eCLIP9.3□□□□□ -0.922e-12■■■■■ 59
LYSMD3-201ENST00000315948 ATAD2Q6PL18 1390 aa9.3□□□□□ -0.92
LYSMD3-201ENST00000315948 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.3□□□□□ -0.92
LYSMD3-201ENST00000315948 SLC24A1O60721 1099 aa9.3□□□□□ -0.92
LYSMD3-201ENST00000315948 HDGFP51858 240 aaKnown RBP9.3□□□□□ -0.92
LYSMD3-201ENST00000315948 C20orf194Q5TEA3 1177 aa9.3□□□□□ -0.92
LYSMD3-201ENST00000315948 HDGFL2Q7Z4V5 671 aaPredicted RBP9.3□□□□□ -0.92
LYSMD3-201ENST00000315948 CPS1P31327 1500 aa9.29□□□□□ -0.92
LYSMD3-201ENST00000315948 CCDC61Q9Y6R9 512 aa9.29□□□□□ -0.92
LYSMD3-201ENST00000315948 SKAP1Q86WV1 359 aa9.28□□□□□ -0.92
LYSMD3-201ENST00000315948 ACEP12821 1306 aa9.28□□□□□ -0.92
LYSMD3-201ENST00000315948 HMOX1P09601 288 aa9.28□□□□□ -0.92
LYSMD3-201ENST00000315948 MED14O60244 1454 aa9.28□□□□□ -0.92
LYSMD3-201ENST00000315948 NKTRP30414 1462 aaKnown RBP9.28□□□□□ -0.92
LYSMD3-201ENST00000315948 XPCQ01831 940 aaPredicted RBP9.28□□□□□ -0.92
LYSMD3-201ENST00000315948 TCP11L2Q8N4U5 519 aa9.28□□□□□ -0.92
LYSMD3-201ENST00000315948 POLKQ9UBT6 870 aa9.28□□□□□ -0.92
LYSMD3-201ENST00000315948 RCAN3Q9UKA8 241 aa9.28□□□□□ -0.92
LYSMD3-201ENST00000315948 ATP7BP35670 1465 aa9.27□□□□□ -0.93
LYSMD3-201ENST00000315948 ARHGAP23Q9P227 1491 aa9.27□□□□□ -0.93
LYSMD3-201ENST00000315948 DUSP27Q5VZP5 1158 aa9.27□□□□□ -0.93
LYSMD3-201ENST00000315948 ZNF521Q96K83 1311 aa9.27□□□□□ -0.93
LYSMD3-201ENST00000315948 CEP170BQ9Y4F5 1589 aaPredicted RBP9.27□□□□□ -0.93
LYSMD3-201ENST00000315948 EXOC6Q8TAG9 804 aa9.26□□□□□ -0.93
LYSMD3-201ENST00000315948 POLR3AO14802 1390 aaPredicted RBP9.26□□□□□ -0.93
LYSMD3-201ENST00000315948 DLC1Q96QB1 1528 aa9.26□□□□□ -0.93
LYSMD3-201ENST00000315948 TBX22Q9Y458 520 aa9.26□□□□□ -0.93
LYSMD3-201ENST00000315948 TECPR2O15040 1411 aa9.26□□□□□ -0.93
LYSMD3-201ENST00000315948 SLIT1O75093 1534 aa9.26□□□□□ -0.93
LYSMD3-201ENST00000315948 SHPRHQ149N8 1683 aa9.26□□□□□ -0.93
LYSMD3-201ENST00000315948 PUS7Q96PZ0 661 aaKnown RBP9.25□□□□□ -0.93
LYSMD3-201ENST00000315948 CPSF1Q10570 1443 aaKnown RBP9.25□□□□□ -0.93
LYSMD3-201ENST00000315948 BCAR3O75815 825 aa9.25□□□□□ -0.93
LYSMD3-201ENST00000315948 ANKLE2Q86XL3 938 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms