RNA–Protein interactions for RNA: ENST00000314891.10

LPCAT4-201, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT4, Length 2,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-201ENST00000314891 MORC1Q86VD1 984 aa27.89■■■□□ 2.06
LPCAT4-201ENST00000314891 POLR3AO14802 1390 aaPredicted RBP27.89■■■□□ 2.06
LPCAT4-201ENST00000314891 CLTCQ00610 1675 aaKnown RBP27.89■■■□□ 2.05
LPCAT4-201ENST00000314891 MSH5O43196 834 aa27.88■■■□□ 2.05
LPCAT4-201ENST00000314891 REREQ9P2R6 1566 aa27.88■■■□□ 2.05
LPCAT4-201ENST00000314891 CABP2Q9NPB3 220 aa27.88■■■□□ 2.05
LPCAT4-201ENST00000314891 PUS7Q96PZ0 661 aaKnown RBP27.85■■■□□ 2.05
LPCAT4-201ENST00000314891 AGLP35573 1532 aa27.85■■■□□ 2.05
LPCAT4-201ENST00000314891 SLFN5Q08AF3 891 aa27.84■■■□□ 2.05
LPCAT4-201ENST00000314891 SPINK5Q9NQ38 1064 aaPredicted RBP27.84■■■□□ 2.05
LPCAT4-201ENST00000314891 PTPRMP28827 1452 aa27.84■■■□□ 2.05
LPCAT4-201ENST00000314891 ANP32EQ9BTT0 268 aa27.84■■■□□ 2.05
LPCAT4-201ENST00000314891 ANKRD36BQ8N2N9 1353 aa27.83■■■□□ 2.05
LPCAT4-201ENST00000314891 CGNL1Q0VF96 1302 aa27.83■■■□□ 2.05
LPCAT4-201ENST00000314891 CRBNQ96SW2 442 aa27.82■■■□□ 2.04
LPCAT4-201ENST00000314891 C20orf194Q5TEA3 1177 aa27.81■■■□□ 2.04
LPCAT4-201ENST00000314891 TRMT2AQ8IZ69 625 aaKnown RBP27.8■■■□□ 2.04
LPCAT4-201ENST00000314891 ALKQ9UM73 1620 aa27.8■■■□□ 2.04
LPCAT4-201ENST00000314891 YTHDC2Q9H6S0 1430 aaKnown RBP27.8■■■□□ 2.04
LPCAT4-201ENST00000314891 KIF13AQ9H1H9 1805 aa27.79■■■□□ 2.04
LPCAT4-201ENST00000314891 DMRT2Q9Y5R5 561 aa27.78■■■□□ 2.04
LPCAT4-201ENST00000314891 PRAM1Q96QH2 718 aa27.77■■■□□ 2.04
LPCAT4-201ENST00000314891 STAG3Q9UJ98 1225 aa27.77■■■□□ 2.04
LPCAT4-201ENST00000314891 MTHFSP49914 203 aa27.76■■■□□ 2.03
LPCAT4-201ENST00000314891 SRPK2P78362 688 aaKnown RBP27.76■■■□□ 2.03
LPCAT4-201ENST00000314891 MLECQ14165 292 aa27.76■■■□□ 2.03
LPCAT4-201ENST00000314891 MINK1Q8N4C8 1332 aaPredicted RBP27.76■■■□□ 2.03
LPCAT4-201ENST00000314891 A0A1W2PP64 1363 aa27.75■■■□□ 2.03
LPCAT4-201ENST00000314891 SPATA31D1Q6ZQQ2 1576 aa27.75■■■□□ 2.03
LPCAT4-201ENST00000314891 PPP6R1Q9UPN7 881 aa27.74■■■□□ 2.03
LPCAT4-201ENST00000314891 A2ML1A8K2U0 1454 aa27.72■■■□□ 2.03
LPCAT4-201ENST00000314891 NKTRP30414 1462 aaKnown RBP27.72■■■□□ 2.03
LPCAT4-201ENST00000314891 NSD2O96028 1365 aa27.71■■■□□ 2.03
LPCAT4-201ENST00000314891 POGKQ9P215 609 aa27.71■■■□□ 2.03
LPCAT4-201ENST00000314891 ARHGEF40Q8TER5 1519 aa27.71■■■□□ 2.03
LPCAT4-201ENST00000314891 MYT1Q01538 1121 aa27.7■■■□□ 2.03
LPCAT4-201ENST00000314891 E9PSI1 815 aa27.7■■■□□ 2.02
LPCAT4-201ENST00000314891 ABCC11Q96J66 1382 aa27.69■■■□□ 2.02
LPCAT4-201ENST00000314891 WWC1Q8IX03 1113 aa27.69■■■□□ 2.02
LPCAT4-201ENST00000314891 SETD1AO15047 1707 aaKnown RBP27.68■■■□□ 2.02
LPCAT4-201ENST00000314891 NINLQ9Y2I6 1382 aa27.68■■■□□ 2.02
LPCAT4-201ENST00000314891 IQSEC2Q5JU85 1478 aa27.68■■■□□ 2.02
LPCAT4-201ENST00000314891 CD163L1Q9NR16 1453 aa27.68■■■□□ 2.02
LPCAT4-201ENST00000314891 NGEFQ8N5V2 710 aa27.68■■■□□ 2.02
LPCAT4-201ENST00000314891 RUNDC1Q96C34 613 aa27.66■■■□□ 2.02
LPCAT4-201ENST00000314891 RRP7AQ9Y3A4 280 aaKnown RBP27.66■■■□□ 2.02
LPCAT4-201ENST00000314891 ATAD2Q6PL18 1390 aa27.66■■■□□ 2.02
LPCAT4-201ENST00000314891 NEUROD2Q15784 382 aa27.66■■■□□ 2.02
LPCAT4-201ENST00000314891 RIMS2Q9UQ26 1411 aa27.65■■■□□ 2.02
LPCAT4-201ENST00000314891 ANKRD26Q9UPS8 1709 aa27.64■■■□□ 2.02
LPCAT4-201ENST00000314891 CFAP53Q96M91 514 aa27.64■■■□□ 2.02
LPCAT4-201ENST00000314891 TCP11L2Q8N4U5 519 aa27.64■■■□□ 2.01
LPCAT4-201ENST00000314891 GGNBP2Q9H3C7 697 aa27.64■■■□□ 2.01
LPCAT4-201ENST00000314891 BCAR3O75815 825 aa27.63■■■□□ 2.01
LPCAT4-201ENST00000314891 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.62■■■□□ 2.01
LPCAT4-201ENST00000314891 CDK19Q9BWU1 502 aa27.62■■■□□ 2.01
LPCAT4-201ENST00000314891 SKAP1Q86WV1 359 aa27.6■■■□□ 2.01
LPCAT4-201ENST00000314891 NLRP1Q9C000 1473 aa27.59■■■□□ 2.01
LPCAT4-201ENST00000314891 NRXN3Q9Y4C0 1643 aa27.59■■■□□ 2.01
LPCAT4-201ENST00000314891 TCERG1O14776 1098 aaKnown RBP27.59■■■□□ 2.01
LPCAT4-201ENST00000314891 WAPLQ7Z5K2 1190 aa27.59■■■□□ 2.01
LPCAT4-201ENST00000314891 TERF2IPQ9NYB0 399 aa27.59■■■□□ 2.01
LPCAT4-201ENST00000314891 FYB1O15117 783 aa27.58■■■□□ 2.01
LPCAT4-201ENST00000314891 PHF23Q9BUL5 403 aaPredicted RBP27.58■■■□□ 2.01
LPCAT4-201ENST00000314891 DLC1Q96QB1 1528 aa27.57■■■□□ 2
LPCAT4-201ENST00000314891 CABP1Q9NZU7 370 aa27.56■■■□□ 2
LPCAT4-201ENST00000314891 ZMYM3Q14202 1370 aa27.56■■■□□ 2
LPCAT4-201ENST00000314891 U2AF1L5P0DN76 240 aaPredicted RBP27.56■■■□□ 2
LPCAT4-201ENST00000314891 U2AF1Q01081 240 aaKnown RBP eCLIP27.56■■■□□ 2
LPCAT4-201ENST00000314891 KIF20BQ96Q89 1820 aa27.56■■■□□ 2
LPCAT4-201ENST00000314891 KDM2BQ8NHM5 1336 aa27.55■■■□□ 2
LPCAT4-201ENST00000314891 COL3A1P02461 1466 aaPredicted RBP27.54■■■□□ 2
LPCAT4-201ENST00000314891 MED14O60244 1454 aa27.53■■■□□ 2
LPCAT4-201ENST00000314891 ADGRB2O60241 1585 aa27.53■■■□□ 2
LPCAT4-201ENST00000314891 HDGFL2Q7Z4V5 671 aaPredicted RBP27.51■■□□□ 1.99
LPCAT4-201ENST00000314891 ESF1Q9H501 851 aaKnown RBP27.51■■□□□ 1.99
LPCAT4-201ENST00000314891 METP08581 1390 aa27.49■■□□□ 1.99
LPCAT4-201ENST00000314891 PDE4AP27815 886 aa27.49■■□□□ 1.99
LPCAT4-201ENST00000314891 CCDC27Q2M243 656 aa27.49■■□□□ 1.99
LPCAT4-201ENST00000314891 MS4A1P11836 297 aa27.48■■□□□ 1.99
LPCAT4-201ENST00000314891 ERICH6Q7L0X2 663 aa27.48■■□□□ 1.99
LPCAT4-201ENST00000314891 WDR63Q8IWG1 891 aa27.48■■□□□ 1.99
LPCAT4-201ENST00000314891 U2SURPO15042 1029 aaKnown RBP27.46■■□□□ 1.99
LPCAT4-201ENST00000314891 CENPQQ7L2Z9 268 aaPredicted RBP27.46■■□□□ 1.99
LPCAT4-201ENST00000314891 BACH2Q9BYV9 841 aa27.45■■□□□ 1.98
LPCAT4-201ENST00000314891 ANP32AP39687 249 aaKnown RBP27.44■■□□□ 1.98
LPCAT4-201ENST00000314891 PLEKHF1Q96S99 279 aa27.44■■□□□ 1.98
LPCAT4-201ENST00000314891 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.43■■□□□ 1.98
LPCAT4-201ENST00000314891 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.43■■□□□ 1.98
LPCAT4-201ENST00000314891 ATP7BP35670 1465 aa27.43■■□□□ 1.98
LPCAT4-201ENST00000314891 UBR1Q8IWV7 1749 aa27.43■■□□□ 1.98
LPCAT4-201ENST00000314891 RARSP54136 660 aaKnown RBP27.42■■□□□ 1.98
LPCAT4-201ENST00000314891 TXNDC2Q86VQ3 553 aa27.42■■□□□ 1.98
LPCAT4-201ENST00000314891 TNRQ92752 1358 aa27.41■■□□□ 1.98
LPCAT4-201ENST00000314891 KNDC1Q76NI1 1749 aa27.41■■□□□ 1.98
LPCAT4-201ENST00000314891 MAP2P11137 1827 aaKnown RBP27.41■■□□□ 1.98
LPCAT4-201ENST00000314891 FBLN1P23142 703 aa27.4■■□□□ 1.98
LPCAT4-201ENST00000314891 PDE3AQ14432 1141 aa27.4■■□□□ 1.98
LPCAT4-201ENST00000314891 NCBP3Q53F19 620 aaKnown RBP27.4■■□□□ 1.98
LPCAT4-201ENST00000314891 PANK1Q8TE04 598 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms