RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 SCAF1Q9H7N4 1312 aaKnown RBP24.91■■□□□ 1.58
SWSAP1-201ENST00000312423 ATF3P18847 181 aa24.91■■□□□ 1.58
SWSAP1-201ENST00000312423 SIRT1Q96EB6 747 aa24.91■■□□□ 1.58
SWSAP1-201ENST00000312423 FBXO41Q8TF61 875 aa24.9■■□□□ 1.58
SWSAP1-201ENST00000312423 PIP4K2BP78356 416 aa24.88■■□□□ 1.57
SWSAP1-201ENST00000312423 CADPS2Q86UW7 1296 aa24.87■■□□□ 1.57
SWSAP1-201ENST00000312423 CARD11Q9BXL7 1154 aa24.87■■□□□ 1.57
SWSAP1-201ENST00000312423 DCCP43146 1447 aa24.86■■□□□ 1.57
SWSAP1-201ENST00000312423 GPRASP1Q5JY77 1395 aa24.85■■□□□ 1.57
SWSAP1-201ENST00000312423 MINK1Q8N4C8 1332 aaPredicted RBP24.82■■□□□ 1.56
SWSAP1-201ENST00000312423 CDC42BPGQ6DT37 1551 aa24.82■■□□□ 1.56
SWSAP1-201ENST00000312423 EIF3AQ14152 1382 aaKnown RBP24.82■■□□□ 1.56
SWSAP1-201ENST00000312423 HIRIP3Q9BW71 556 aaPredicted RBP24.81■■□□□ 1.56
SWSAP1-201ENST00000312423 SLAIN2Q9P270 581 aa24.81■■□□□ 1.56
SWSAP1-201ENST00000312423 CENPJQ9HC77 1338 aaPredicted RBP24.79■■□□□ 1.56
SWSAP1-201ENST00000312423 QRICH2Q9H0J4 1663 aa24.79■■□□□ 1.56
SWSAP1-201ENST00000312423 MST1RQ04912 1400 aa24.77■■□□□ 1.56
SWSAP1-201ENST00000312423 ADGRB2O60241 1585 aa24.77■■□□□ 1.56
SWSAP1-201ENST00000312423 ROBO1Q9Y6N7 1651 aa24.76■■□□□ 1.55
SWSAP1-201ENST00000312423 NUTM2FA1L443 756 aa24.75■■□□□ 1.55
SWSAP1-201ENST00000312423 FMN2Q9NZ56 1722 aa24.75■■□□□ 1.55
SWSAP1-201ENST00000312423 ILDR1Q86SU0 546 aaPredicted RBP24.75■■□□□ 1.55
SWSAP1-201ENST00000312423 C1orf167Q5SNV9 1468 aa24.72■■□□□ 1.55
SWSAP1-201ENST00000312423 WASLO00401 505 aaPredicted RBP24.69■■□□□ 1.54
SWSAP1-201ENST00000312423 USP47Q96K76 1375 aa24.69■■□□□ 1.54
SWSAP1-201ENST00000312423 ESCO1Q5FWF5 840 aa24.67■■□□□ 1.54
SWSAP1-201ENST00000312423 BRINP3Q76B58 766 aa24.67■■□□□ 1.54
SWSAP1-201ENST00000312423 RGPD8O14715 1765 aaPredicted RBP24.66■■□□□ 1.54
SWSAP1-201ENST00000312423 ORAI2Q96SN7 254 aa24.66■■□□□ 1.54
SWSAP1-201ENST00000312423 CDK19Q9BWU1 502 aa24.66■■□□□ 1.54
SWSAP1-201ENST00000312423 TULP4Q9NRJ4 1543 aa24.65■■□□□ 1.54
SWSAP1-201ENST00000312423 ST20-MTHFSA0A0A6YYL1 179 aa24.64■■□□□ 1.53
SWSAP1-201ENST00000312423 SRPK2P78362 688 aaKnown RBP24.64■■□□□ 1.53
SWSAP1-201ENST00000312423 ANKARQ7Z5J8 1434 aa24.63■■□□□ 1.53
SWSAP1-201ENST00000312423 USP32Q8NFA0 1604 aa24.63■■□□□ 1.53
SWSAP1-201ENST00000312423 EVC2Q86UK5 1308 aa24.63■■□□□ 1.53
SWSAP1-201ENST00000312423 HSPA1LP34931 641 aa24.62■■□□□ 1.53
SWSAP1-201ENST00000312423 PHLPP1O60346 1717 aa24.61■■□□□ 1.53
SWSAP1-201ENST00000312423 SBNO2Q9Y2G9 1366 aa24.61■■□□□ 1.53
SWSAP1-201ENST00000312423 PRR36Q9H6K5 1346 aa24.6■■□□□ 1.53
SWSAP1-201ENST00000312423 CABP2Q9NPB3 220 aa24.59■■□□□ 1.53
SWSAP1-201ENST00000312423 ITSN1Q15811 1721 aa24.59■■□□□ 1.53
SWSAP1-201ENST00000312423 NUDT16Q96DE0 195 aaKnown RBP24.59■■□□□ 1.53
SWSAP1-201ENST00000312423 KIF1AQ12756 1690 aa24.58■■□□□ 1.53
SWSAP1-201ENST00000312423 ATP7BP35670 1465 aa24.58■■□□□ 1.53
SWSAP1-201ENST00000312423 NHSL1Q5SYE7 1610 aa24.58■■□□□ 1.52
SWSAP1-201ENST00000312423 AHDC1Q5TGY3 1603 aaPredicted RBP24.58■■□□□ 1.52
SWSAP1-201ENST00000312423 DDX17Q92841 729 aaKnown RBP24.57■■□□□ 1.52
SWSAP1-201ENST00000312423 PHF8Q9UPP1 1060 aa24.57■■□□□ 1.52
SWSAP1-201ENST00000312423 EIF4G2P78344 907 aaKnown RBP eCLIP24.56■■□□□ 1.52
SWSAP1-201ENST00000312423 PMFBP1Q8TBY8 1022 aa24.55■■□□□ 1.52
SWSAP1-201ENST00000312423 TESK2Q96S53 571 aa24.55■■□□□ 1.52
SWSAP1-201ENST00000312423 FOXO3O43524 673 aa24.54■■□□□ 1.52
SWSAP1-201ENST00000312423 TOPAZ1Q8N9V7 1692 aa24.53■■□□□ 1.52
SWSAP1-201ENST00000312423 NPHP3Q7Z494 1330 aa24.53■■□□□ 1.52
SWSAP1-201ENST00000312423 SLC24A1O60721 1099 aa24.53■■□□□ 1.52
SWSAP1-201ENST00000312423 COL16A1Q07092 1604 aaPredicted RBP24.52■■□□□ 1.52
SWSAP1-201ENST00000312423 HSPA5P11021 654 aaKnown RBP24.52■■□□□ 1.52
SWSAP1-201ENST00000312423 CCDC61Q9Y6R9 512 aa24.52■■□□□ 1.52
SWSAP1-201ENST00000312423 XPCQ01831 940 aaPredicted RBP24.5■■□□□ 1.51
SWSAP1-201ENST00000312423 PPIP5K1Q6PFW1 1433 aa24.5■■□□□ 1.51
SWSAP1-201ENST00000312423 TMF1P82094 1093 aa24.5■■□□□ 1.51
SWSAP1-201ENST00000312423 NGDNQ8NEJ9 315 aaKnown RBP24.5■■□□□ 1.51
SWSAP1-201ENST00000312423 ATAD2Q6PL18 1390 aa24.49■■□□□ 1.51
SWSAP1-201ENST00000312423 ZEB1P37275 1124 aaPredicted RBP24.48■■□□□ 1.51
SWSAP1-201ENST00000312423 PSME1Q06323 249 aa24.47■■□□□ 1.51
SWSAP1-201ENST00000312423 DISP3Q9P2K9 1392 aa24.47■■□□□ 1.51
SWSAP1-201ENST00000312423 PXDNQ92626 1479 aa24.45■■□□□ 1.5
SWSAP1-201ENST00000312423 SOS2Q07890 1332 aaPredicted RBP24.45■■□□□ 1.5
SWSAP1-201ENST00000312423 KRT28Q7Z3Y7 464 aa24.45■■□□□ 1.5
SWSAP1-201ENST00000312423 CABP1Q9NZU7 370 aa24.45■■□□□ 1.5
SWSAP1-201ENST00000312423 ACEP12821 1306 aa24.44■■□□□ 1.5
SWSAP1-201ENST00000312423 LRRC59Q96AG4 307 aaKnown RBP24.43■■□□□ 1.5
SWSAP1-201ENST00000312423 PLEKHG3A1L390 1219 aa24.43■■□□□ 1.5
SWSAP1-201ENST00000312423 TMC1Q8TDI8 760 aa24.43■■□□□ 1.5
SWSAP1-201ENST00000312423 CDCA8Q53HL2 280 aa24.42■■□□□ 1.5
SWSAP1-201ENST00000312423 JCADQ9P266 1359 aa24.41■■□□□ 1.5
SWSAP1-201ENST00000312423 POLR3AO14802 1390 aaPredicted RBP24.4■■□□□ 1.5
SWSAP1-201ENST00000312423 PUS7Q96PZ0 661 aaKnown RBP24.4■■□□□ 1.5
SWSAP1-201ENST00000312423 POLR3GLQ9BT43 218 aa24.4■■□□□ 1.5
SWSAP1-201ENST00000312423 SHPRHQ149N8 1683 aa24.38■■□□□ 1.49
SWSAP1-201ENST00000312423 PAK3O75914 559 aaPredicted RBP24.37■■□□□ 1.49
SWSAP1-201ENST00000312423 LMOD2Q6P5Q4 547 aa24.37■■□□□ 1.49
SWSAP1-201ENST00000312423 TRPM3Q9HCF6 1732 aaPredicted RBP24.36■■□□□ 1.49
SWSAP1-201ENST00000312423 TNS3Q68CZ2 1445 aa24.36■■□□□ 1.49
SWSAP1-201ENST00000312423 SBNO1A3KN83 1393 aa24.35■■□□□ 1.49
SWSAP1-201ENST00000312423 SLC12A5Q9H2X9 1139 aa24.35■■□□□ 1.49
SWSAP1-201ENST00000312423 SPATA31A3Q5VYP0 1347 aa24.35■■□□□ 1.49
SWSAP1-201ENST00000312423 PNPLA6Q8IY17 1366 aa24.34■■□□□ 1.49
SWSAP1-201ENST00000312423 AKAP12Q02952 1782 aa24.34■■□□□ 1.49
SWSAP1-201ENST00000312423 NINLQ9Y2I6 1382 aa24.33■■□□□ 1.49
SWSAP1-201ENST00000312423 HDGFL2Q7Z4V5 671 aaPredicted RBP24.32■■□□□ 1.48
SWSAP1-201ENST00000312423 USP6P35125 1406 aa24.31■■□□□ 1.48
SWSAP1-201ENST00000312423 PLEKHG5O94827 1062 aa24.31■■□□□ 1.48
SWSAP1-201ENST00000312423 TERF2IPQ9NYB0 399 aa24.31■■□□□ 1.48
SWSAP1-201ENST00000312423 KTN1Q86UP2 1357 aaKnown RBP24.31■■□□□ 1.48
SWSAP1-201ENST00000312423 NUTM2BA6NNL0 878 aaPredicted RBP24.3■■□□□ 1.48
SWSAP1-201ENST00000312423 NUTM2EB1AL46 878 aaPredicted RBP24.3■■□□□ 1.48
SWSAP1-201ENST00000312423 NUTM2AQ8IVF1 878 aaPredicted RBP24.3■■□□□ 1.48
SWSAP1-201ENST00000312423 ZNF692Q9BU19 519 aaPredicted RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms