RNA–Protein interactions for RNA: ENST00000310015.10

SP3-201, Transcript of Sp3 transcription factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SP3, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-201ENST00000310015 C22orf23Q9BZE7 217 aa13.99□□□□□ -0.17
SP3-201ENST00000310015 TRERF1Q96PN7 1200 aa13.98□□□□□ -0.17
SP3-201ENST00000310015 TNNT1P13805 278 aa13.98□□□□□ -0.17
SP3-201ENST00000310015 CEBPZQ03701 1054 aaKnown RBP13.98□□□□□ -0.17
SP3-201ENST00000310015 MSH5O43196 834 aa13.98□□□□□ -0.17
SP3-201ENST00000310015 TRIM5Q9C035 493 aa13.98□□□□□ -0.17
SP3-201ENST00000310015 DYDC1Q8WWB3 177 aa13.97□□□□□ -0.17
SP3-201ENST00000310015 REC8O95072 547 aa13.97□□□□□ -0.17
SP3-201ENST00000310015 CLASRPQ8N2M8 674 aaKnown RBP13.97□□□□□ -0.17
SP3-201ENST00000310015 GIMAP7Q8NHV1 300 aa13.97□□□□□ -0.17
SP3-201ENST00000310015 CCDC173Q0VFZ6 552 aa13.96□□□□□ -0.17
SP3-201ENST00000310015 USP47Q96K76 1375 aa13.96□□□□□ -0.17
SP3-201ENST00000310015 RRP9O43818 475 aaKnown RBP13.96□□□□□ -0.17
SP3-201ENST00000310015 OFD1O75665 1012 aa13.96□□□□□ -0.17
SP3-201ENST00000310015 DDX19BQ9UMR2 479 aa13.96□□□□□ -0.17
SP3-201ENST00000310015 CCDC73Q6ZRK6 1079 aa13.96□□□□□ -0.17
SP3-201ENST00000310015 DNAJC2Q99543 621 aaKnown RBP13.96□□□□□ -0.17
SP3-201ENST00000310015 CHMP4AQ9BY43 222 aa13.96□□□□□ -0.18
SP3-201ENST00000310015 HDAC5Q9UQL6 1122 aa13.95□□□□□ -0.18
SP3-201ENST00000310015 SEPT7Q16181 437 aaKnown RBP13.95□□□□□ -0.18
SP3-201ENST00000310015 TSPY26PQ9H489 355 aa13.95□□□□□ -0.18
SP3-201ENST00000310015 NACADO15069 1562 aa13.95□□□□□ -0.18
SP3-201ENST00000310015 CNTLNQ9NXG0 1405 aa13.95□□□□□ -0.18
SP3-201ENST00000310015 HOMEZQ8IX15 550 aa13.95□□□□□ -0.18
SP3-201ENST00000310015 ZFP91Q96JP5 570 aaPredicted RBP13.95□□□□□ -0.18
SP3-201ENST00000310015 CWC22Q9HCG8 908 aaKnown RBP13.94□□□□□ -0.18
SP3-201ENST00000310015 AMOTL1Q8IY63 956 aa13.94□□□□□ -0.18
SP3-201ENST00000310015 IFIT2P09913 472 aaKnown RBP13.94□□□□□ -0.18
SP3-201ENST00000310015 ZRSR2Q15696 482 aaKnown RBP13.94□□□□□ -0.18
SP3-201ENST00000310015 AMPHP49418 695 aa13.94□□□□□ -0.18
SP3-201ENST00000310015 NOL10Q9BSC4 688 aaKnown RBP13.94□□□□□ -0.18
SP3-201ENST00000310015 APAF1O14727 1248 aa13.93□□□□□ -0.18
SP3-201ENST00000310015 HDGFP51858 240 aaKnown RBP13.93□□□□□ -0.18
SP3-201ENST00000310015 CCDC7Q96M83 1385 aa13.93□□□□□ -0.18
SP3-201ENST00000310015 TAF3Q5VWG9 929 aa13.93□□□□□ -0.18
SP3-201ENST00000310015 TMEM132AQ24JP5 1023 aa13.93□□□□□ -0.18
SP3-201ENST00000310015 ERICH2A1L162 156 aa13.93□□□□□ -0.18
SP3-201ENST00000310015 PAF1Q8N7H5 531 aa13.92□□□□□ -0.18
SP3-201ENST00000310015 PRPF40AO75400 957 aaKnown RBP13.92□□□□□ -0.18
SP3-201ENST00000310015 ZKSCAN1P17029 563 aaPredicted RBP13.92□□□□□ -0.18
SP3-201ENST00000310015 CBX1P83916 185 aa13.92□□□□□ -0.18
SP3-201ENST00000310015 AAMPQ13685 434 aa13.92□□□□□ -0.18
SP3-201ENST00000310015 TRAK1Q9UPV9 953 aa13.92□□□□□ -0.18
SP3-201ENST00000310015 DZIP1LQ8IYY4 767 aaKnown RBP13.92□□□□□ -0.18
SP3-201ENST00000310015 MYO6Q9UM54 1294 aa13.92□□□□□ -0.18
SP3-201ENST00000310015 BACH2Q9BYV9 841 aa13.92□□□□□ -0.18
SP3-201ENST00000310015 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.92□□□□□ -0.18
SP3-201ENST00000310015 GOLGA6L10A6NI86 522 aa13.91□□□□□ -0.18
SP3-201ENST00000310015 ATP2B1P20020 1258 aa13.91□□□□□ -0.18
SP3-201ENST00000310015 NAT10Q9H0A0 1025 aaKnown RBP13.91□□□□□ -0.18
SP3-201ENST00000310015 CCDC18Q5T9S5 1454 aa13.91□□□□□ -0.18
SP3-201ENST00000310015 HMGN5P82970 282 aaKnown RBP13.91□□□□□ -0.18
SP3-201ENST00000310015 RAPGEF2Q9Y4G8 1499 aa13.91□□□□□ -0.18
SP3-201ENST00000310015 TERF2IPQ9NYB0 399 aa13.91□□□□□ -0.18
SP3-201ENST00000310015 MROH2BQ7Z745 1585 aa13.91□□□□□ -0.18
SP3-201ENST00000310015 SRRTQ9BXP5 876 aaKnown RBP13.91□□□□□ -0.18
SP3-201ENST00000310015 VPS37DQ86XT2 251 aa13.9□□□□□ -0.18
SP3-201ENST00000310015 ZNF428Q96B54 188 aa13.9□□□□□ -0.18
SP3-201ENST00000310015 TMX1Q9H3N1 280 aa13.9□□□□□ -0.18
SP3-201ENST00000310015 CCDC102AQ96A19 550 aa13.89□□□□□ -0.19
SP3-201ENST00000310015 CHMP4CQ96CF2 233 aa13.89□□□□□ -0.19
SP3-201ENST00000310015 HNRNPMP52272 730 aaKnown RBP eCLIP13.89□□□□□ -0.194e-7■■■■□ 25.7
SP3-201ENST00000310015 NEXNQ0ZGT2 675 aa13.89□□□□□ -0.19
SP3-201ENST00000310015 IPO4Q8TEX9 1081 aaKnown RBP13.89□□□□□ -0.19
SP3-201ENST00000310015 RUFY2Q8WXA3 655 aa13.89□□□□□ -0.19
SP3-201ENST00000310015 KIF7Q2M1P5 1343 aa13.89□□□□□ -0.19
SP3-201ENST00000310015 CPLX2Q6PUV4 134 aaKnown RBP13.89□□□□□ -0.19
SP3-201ENST00000310015 C9orf78Q9NZ63 289 aaPredicted RBP13.89□□□□□ -0.19
SP3-201ENST00000310015 TRDNQ13061 729 aa13.88□□□□□ -0.19
SP3-201ENST00000310015 CCDC181Q5TID7 509 aa13.88□□□□□ -0.19
SP3-201ENST00000310015 INTS3Q68E01 1043 aaKnown RBP13.88□□□□□ -0.19
SP3-201ENST00000310015 SDF4Q9BRK5 362 aa13.88□□□□□ -0.19
SP3-201ENST00000310015 MAGEC2Q9UBF1 373 aaPredicted RBP13.88□□□□□ -0.19
SP3-201ENST00000310015 NF2P35240 595 aa13.87□□□□□ -0.19
SP3-201ENST00000310015 LNPKQ9C0E8 428 aa13.87□□□□□ -0.19
SP3-201ENST00000310015 DEF6Q9H4E7 631 aa13.87□□□□□ -0.19
SP3-201ENST00000310015 GOLGA6L10A0A0M3HER8 536 aa13.87□□□□□ -0.19
SP3-201ENST00000310015 NGDNQ8NEJ9 315 aaKnown RBP13.87□□□□□ -0.19
SP3-201ENST00000310015 SMARCE1Q969G3 411 aa13.87□□□□□ -0.19
SP3-201ENST00000310015 GRPEL1Q9HAV7 217 aa13.87□□□□□ -0.19
SP3-201ENST00000310015 SEPT11Q9NVA2 429 aaKnown RBP13.87□□□□□ -0.19
SP3-201ENST00000310015 RBM33Q96EV2 1170 aaKnown RBP13.86□□□□□ -0.19
SP3-201ENST00000310015 SAFBQ15424 915 aaKnown RBP eCLIP13.86□□□□□ -0.19
SP3-201ENST00000310015 RSPH4AQ5TD94 716 aa13.86□□□□□ -0.19
SP3-201ENST00000310015 GOLGA6L7A0A1B0GV03 622 aa13.86□□□□□ -0.19
SP3-201ENST00000310015 FHOD3Q2V2M9 1422 aa13.86□□□□□ -0.19
SP3-201ENST00000310015 SERPINC1P01008 464 aa13.86□□□□□ -0.19
SP3-201ENST00000310015 WASHC4Q2M389 1173 aa13.86□□□□□ -0.19
SP3-201ENST00000310015 MBD3O95983 291 aa13.85□□□□□ -0.19
SP3-201ENST00000310015 KLHL34Q8N239 644 aa13.85□□□□□ -0.19
SP3-201ENST00000310015 ERLIN2O94905 339 aa13.85□□□□□ -0.19
SP3-201ENST00000310015 BCCIPQ9P287 314 aaKnown RBP eCLIP13.85□□□□□ -0.19
SP3-201ENST00000310015 ESPNB1AK53 854 aa13.85□□□□□ -0.19
SP3-201ENST00000310015 STK3Q13188 491 aa13.85□□□□□ -0.19
SP3-201ENST00000310015 SYCP1Q15431 976 aa13.85□□□□□ -0.19
SP3-201ENST00000310015 KIF3BO15066 747 aa13.85□□□□□ -0.19
SP3-201ENST00000310015 WASHC2AQ641Q2 1341 aa13.85□□□□□ -0.19
SP3-201ENST00000310015 BRD4O60885 1362 aaPredicted RBP13.84□□□□□ -0.19
SP3-201ENST00000310015 INCENPQ9NQS7 918 aa13.84□□□□□ -0.19
SP3-201ENST00000310015 PANK1Q8TE04 598 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms