RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ATF3P18847 181 aa25.32■■□□□ 1.64
SSSCA1-201ENST00000309328 WAPLQ7Z5K2 1190 aa25.32■■□□□ 1.64
SSSCA1-201ENST00000309328 CENPJQ9HC77 1338 aaPredicted RBP25.32■■□□□ 1.64
SSSCA1-201ENST00000309328 RBM33Q96EV2 1170 aaKnown RBP25.29■■□□□ 1.64
SSSCA1-201ENST00000309328 PLEKHH1Q9ULM0 1364 aa25.29■■□□□ 1.64
SSSCA1-201ENST00000309328 ARHGEF28Q8N1W1 1705 aaKnown RBP25.28■■□□□ 1.64
SSSCA1-201ENST00000309328 SBNO2Q9Y2G9 1366 aa25.27■■□□□ 1.64
SSSCA1-201ENST00000309328 CDC42BPGQ6DT37 1551 aa25.26■■□□□ 1.63
SSSCA1-201ENST00000309328 XIRP1Q702N8 1843 aaKnown RBP25.25■■□□□ 1.63
SSSCA1-201ENST00000309328 ADGRB2O60241 1585 aa25.24■■□□□ 1.63
SSSCA1-201ENST00000309328 USP47Q96K76 1375 aa25.24■■□□□ 1.63
SSSCA1-201ENST00000309328 UBAP1LF5GYI3 381 aa25.24■■□□□ 1.63
SSSCA1-201ENST00000309328 SAFB2Q14151 953 aaKnown RBP eCLIP25.23■■□□□ 1.63
SSSCA1-201ENST00000309328 FBXO41Q8TF61 875 aa25.22■■□□□ 1.63
SSSCA1-201ENST00000309328 NALCNQ8IZF0 1738 aa25.22■■□□□ 1.63
SSSCA1-201ENST00000309328 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.21■■□□□ 1.63
SSSCA1-201ENST00000309328 SLAIN2Q9P270 581 aa25.2■■□□□ 1.62
SSSCA1-201ENST00000309328 MINK1Q8N4C8 1332 aaPredicted RBP25.19■■□□□ 1.62
SSSCA1-201ENST00000309328 WASLO00401 505 aaPredicted RBP25.18■■□□□ 1.62
SSSCA1-201ENST00000309328 EIF4G2P78344 907 aaKnown RBP eCLIP25.18■■□□□ 1.62
SSSCA1-201ENST00000309328 EVC2Q86UK5 1308 aa25.16■■□□□ 1.62
SSSCA1-201ENST00000309328 MST1RQ04912 1400 aa25.16■■□□□ 1.62
SSSCA1-201ENST00000309328 ANKARQ7Z5J8 1434 aa25.16■■□□□ 1.62
SSSCA1-201ENST00000309328 ST20-MTHFSA0A0A6YYL1 179 aa25.15■■□□□ 1.62
SSSCA1-201ENST00000309328 HIRIP3Q9BW71 556 aaPredicted RBP25.14■■□□□ 1.62
SSSCA1-201ENST00000309328 QRICH2Q9H0J4 1663 aa25.13■■□□□ 1.61
SSSCA1-201ENST00000309328 C1orf167Q5SNV9 1468 aa25.13■■□□□ 1.61
SSSCA1-201ENST00000309328 PUS7Q96PZ0 661 aaKnown RBP25.11■■□□□ 1.61
SSSCA1-201ENST00000309328 TULP4Q9NRJ4 1543 aa25.11■■□□□ 1.61
SSSCA1-201ENST00000309328 CDCA8Q53HL2 280 aa25.1■■□□□ 1.61
SSSCA1-201ENST00000309328 CDK19Q9BWU1 502 aa25.1■■□□□ 1.61
SSSCA1-201ENST00000309328 TESK2Q96S53 571 aa25.09■■□□□ 1.61
SSSCA1-201ENST00000309328 FMN2Q9NZ56 1722 aa25.09■■□□□ 1.61
SSSCA1-201ENST00000309328 SRPK2P78362 688 aaKnown RBP25.08■■□□□ 1.61
SSSCA1-201ENST00000309328 TMF1P82094 1093 aa25.08■■□□□ 1.61
SSSCA1-201ENST00000309328 PIP4K2BP78356 416 aa25.07■■□□□ 1.6
SSSCA1-201ENST00000309328 SCAF1Q9H7N4 1312 aaKnown RBP25.07■■□□□ 1.6
SSSCA1-201ENST00000309328 ATAD2Q6PL18 1390 aa25.06■■□□□ 1.6
SSSCA1-201ENST00000309328 BRINP3Q76B58 766 aa25.05■■□□□ 1.6
SSSCA1-201ENST00000309328 CCDC61Q9Y6R9 512 aa25.05■■□□□ 1.6
SSSCA1-201ENST00000309328 HSPA5P11021 654 aaKnown RBP25.04■■□□□ 1.6
SSSCA1-201ENST00000309328 ESCO1Q5FWF5 840 aa25.04■■□□□ 1.6
SSSCA1-201ENST00000309328 NUDT16Q96DE0 195 aaKnown RBP25.04■■□□□ 1.6
SSSCA1-201ENST00000309328 ATP7BP35670 1465 aa25.02■■□□□ 1.6
SSSCA1-201ENST00000309328 NUTM2FA1L443 756 aa25■■□□□ 1.59
SSSCA1-201ENST00000309328 PHF8Q9UPP1 1060 aa25■■□□□ 1.59
SSSCA1-201ENST00000309328 NPHP3Q7Z494 1330 aa25■■□□□ 1.59
SSSCA1-201ENST00000309328 PRR36Q9H6K5 1346 aa24.99■■□□□ 1.59
SSSCA1-201ENST00000309328 CABP2Q9NPB3 220 aa24.99■■□□□ 1.59
SSSCA1-201ENST00000309328 NINLQ9Y2I6 1382 aa24.99■■□□□ 1.59
SSSCA1-201ENST00000309328 ROBO1Q9Y6N7 1651 aa24.99■■□□□ 1.59
SSSCA1-201ENST00000309328 KIF1AQ12756 1690 aa24.98■■□□□ 1.59
SSSCA1-201ENST00000309328 ORAI2Q96SN7 254 aa24.98■■□□□ 1.59
SSSCA1-201ENST00000309328 PLEKHG3A1L390 1219 aa24.97■■□□□ 1.59
SSSCA1-201ENST00000309328 ITSN1Q15811 1721 aa24.95■■□□□ 1.59
SSSCA1-201ENST00000309328 AHDC1Q5TGY3 1603 aaPredicted RBP24.95■■□□□ 1.58
SSSCA1-201ENST00000309328 USP32Q8NFA0 1604 aa24.95■■□□□ 1.58
SSSCA1-201ENST00000309328 PPIP5K1Q6PFW1 1433 aa24.94■■□□□ 1.58
SSSCA1-201ENST00000309328 DISP3Q9P2K9 1392 aa24.93■■□□□ 1.58
SSSCA1-201ENST00000309328 NGDNQ8NEJ9 315 aaKnown RBP24.92■■□□□ 1.58
SSSCA1-201ENST00000309328 POLR3AO14802 1390 aaPredicted RBP24.92■■□□□ 1.58
SSSCA1-201ENST00000309328 PSME1Q06323 249 aa24.91■■□□□ 1.58
SSSCA1-201ENST00000309328 BRD4O60885 1362 aaPredicted RBP24.91■■□□□ 1.58
SSSCA1-201ENST00000309328 FOXO3O43524 673 aa24.9■■□□□ 1.58
SSSCA1-201ENST00000309328 TOPAZ1Q8N9V7 1692 aa24.9■■□□□ 1.58
SSSCA1-201ENST00000309328 SOS2Q07890 1332 aaPredicted RBP24.89■■□□□ 1.58
SSSCA1-201ENST00000309328 ZNF692Q9BU19 519 aaPredicted RBP24.89■■□□□ 1.58
SSSCA1-201ENST00000309328 CABP1Q9NZU7 370 aa24.89■■□□□ 1.58
SSSCA1-201ENST00000309328 NHSL1Q5SYE7 1610 aa24.88■■□□□ 1.57
SSSCA1-201ENST00000309328 PMFBP1Q8TBY8 1022 aa24.88■■□□□ 1.57
SSSCA1-201ENST00000309328 LRRC59Q96AG4 307 aaKnown RBP24.87■■□□□ 1.57
SSSCA1-201ENST00000309328 TERF2IPQ9NYB0 399 aa24.87■■□□□ 1.57
SSSCA1-201ENST00000309328 ACEP12821 1306 aa24.86■■□□□ 1.57
SSSCA1-201ENST00000309328 HSPA1LP34931 641 aa24.86■■□□□ 1.57
SSSCA1-201ENST00000309328 SBNO1A3KN83 1393 aa24.85■■□□□ 1.57
SSSCA1-201ENST00000309328 TMC1Q8TDI8 760 aa24.85■■□□□ 1.57
SSSCA1-201ENST00000309328 KRT28Q7Z3Y7 464 aa24.84■■□□□ 1.57
SSSCA1-201ENST00000309328 HDGFL2Q7Z4V5 671 aaPredicted RBP24.84■■□□□ 1.57
SSSCA1-201ENST00000309328 PXDNQ92626 1479 aa24.83■■□□□ 1.57
SSSCA1-201ENST00000309328 RGPD8O14715 1765 aaPredicted RBP24.82■■□□□ 1.56
SSSCA1-201ENST00000309328 PHLPP1O60346 1717 aa24.81■■□□□ 1.56
SSSCA1-201ENST00000309328 CPSF1Q10570 1443 aaKnown RBP24.81■■□□□ 1.56
SSSCA1-201ENST00000309328 JCADQ9P266 1359 aa24.8■■□□□ 1.56
SSSCA1-201ENST00000309328 COL16A1Q07092 1604 aaPredicted RBP24.8■■□□□ 1.56
SSSCA1-201ENST00000309328 ARHGEF10O15013 1369 aa24.8■■□□□ 1.56
SSSCA1-201ENST00000309328 SLC12A5Q9H2X9 1139 aa24.79■■□□□ 1.56
SSSCA1-201ENST00000309328 ANKRD36BQ8N2N9 1353 aa24.79■■□□□ 1.56
SSSCA1-201ENST00000309328 USP6P35125 1406 aa24.78■■□□□ 1.56
SSSCA1-201ENST00000309328 DDX17Q92841 729 aaKnown RBP24.78■■□□□ 1.56
SSSCA1-201ENST00000309328 TNS3Q68CZ2 1445 aa24.78■■□□□ 1.56
SSSCA1-201ENST00000309328 KIF7Q2M1P5 1343 aa24.77■■□□□ 1.56
SSSCA1-201ENST00000309328 SPATA31A3Q5VYP0 1347 aa24.77■■□□□ 1.56
SSSCA1-201ENST00000309328 KTN1Q86UP2 1357 aaKnown RBP24.77■■□□□ 1.56
SSSCA1-201ENST00000309328 XPCQ01831 940 aaPredicted RBP24.75■■□□□ 1.55
SSSCA1-201ENST00000309328 POLR3GLQ9BT43 218 aa24.75■■□□□ 1.55
SSSCA1-201ENST00000309328 TTC21AQ8NDW8 1320 aa24.75■■□□□ 1.55
SSSCA1-201ENST00000309328 A0A1W2PP64 1363 aa24.74■■□□□ 1.55
SSSCA1-201ENST00000309328 EDC4Q6P2E9 1401 aaKnown RBP24.74■■□□□ 1.55
SSSCA1-201ENST00000309328 CD163L1Q9NR16 1453 aa24.73■■□□□ 1.55
SSSCA1-201ENST00000309328 CCDC7Q96M83 1385 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms