RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 POGKQ9P215 609 aa31.54■■■□□ 2.64
SNUPN-201ENST00000308588 DCCP43146 1447 aa31.54■■■□□ 2.64
SNUPN-201ENST00000308588 ARHGEF28Q8N1W1 1705 aaKnown RBP31.53■■■□□ 2.64
SNUPN-201ENST00000308588 ATF3P18847 181 aa31.53■■■□□ 2.64
SNUPN-201ENST00000308588 SAFB2Q14151 953 aaKnown RBP eCLIP31.53■■■□□ 2.64
SNUPN-201ENST00000308588 CADPS2Q86UW7 1296 aa31.53■■■□□ 2.64
SNUPN-201ENST00000308588 PIP4K2BP78356 416 aa31.49■■■□□ 2.63
SNUPN-201ENST00000308588 SLAIN2Q9P270 581 aa31.49■■■□□ 2.63
SNUPN-201ENST00000308588 CARD11Q9BXL7 1154 aa31.48■■■□□ 2.63
SNUPN-201ENST00000308588 ILDR1Q86SU0 546 aaPredicted RBP31.44■■■□□ 2.62
SNUPN-201ENST00000308588 SCAF1Q9H7N4 1312 aaKnown RBP31.44■■■□□ 2.62
SNUPN-201ENST00000308588 CDC42BPGQ6DT37 1551 aa31.44■■■□□ 2.62
SNUPN-201ENST00000308588 MST1RQ04912 1400 aa31.43■■■□□ 2.62
SNUPN-201ENST00000308588 MINK1Q8N4C8 1332 aaPredicted RBP31.42■■■□□ 2.62
SNUPN-201ENST00000308588 CENPJQ9HC77 1338 aaPredicted RBP31.41■■■□□ 2.62
SNUPN-201ENST00000308588 HIRIP3Q9BW71 556 aaPredicted RBP31.4■■■□□ 2.62
SNUPN-201ENST00000308588 ADGRB2O60241 1585 aa31.38■■■□□ 2.61
SNUPN-201ENST00000308588 EIF3AQ14152 1382 aaKnown RBP31.36■■■□□ 2.61
SNUPN-201ENST00000308588 C1orf167Q5SNV9 1468 aa31.36■■■□□ 2.61
SNUPN-201ENST00000308588 ROBO1Q9Y6N7 1651 aa31.34■■■□□ 2.61
SNUPN-201ENST00000308588 FMN2Q9NZ56 1722 aa31.33■■■□□ 2.61
SNUPN-201ENST00000308588 NUTM2FA1L443 756 aa31.33■■■□□ 2.61
SNUPN-201ENST00000308588 WASLO00401 505 aaPredicted RBP31.32■■■□□ 2.6
SNUPN-201ENST00000308588 BRINP3Q76B58 766 aa31.32■■■□□ 2.6
SNUPN-201ENST00000308588 QRICH2Q9H0J4 1663 aa31.32■■■□□ 2.6
SNUPN-201ENST00000308588 ORAI2Q96SN7 254 aa31.29■■■□□ 2.6
SNUPN-201ENST00000308588 CDK19Q9BWU1 502 aa31.26■■■□□ 2.59
SNUPN-201ENST00000308588 HSPA1LP34931 641 aa31.25■■■□□ 2.59
SNUPN-201ENST00000308588 USP47Q96K76 1375 aa31.25■■■□□ 2.59
SNUPN-201ENST00000308588 ESCO1Q5FWF5 840 aa31.24■■■□□ 2.59
SNUPN-201ENST00000308588 ST20-MTHFSA0A0A6YYL1 179 aa31.24■■■□□ 2.59
SNUPN-201ENST00000308588 ANKARQ7Z5J8 1434 aa31.23■■■□□ 2.59
SNUPN-201ENST00000308588 PRR36Q9H6K5 1346 aa31.23■■■□□ 2.59
SNUPN-201ENST00000308588 SBNO2Q9Y2G9 1366 aa31.23■■■□□ 2.59
SNUPN-201ENST00000308588 USP32Q8NFA0 1604 aa31.23■■■□□ 2.59
SNUPN-201ENST00000308588 TULP4Q9NRJ4 1543 aa31.22■■■□□ 2.59
SNUPN-201ENST00000308588 RGPD8O14715 1765 aaPredicted RBP31.2■■■□□ 2.59
SNUPN-201ENST00000308588 TESK2Q96S53 571 aa31.19■■■□□ 2.58
SNUPN-201ENST00000308588 EVC2Q86UK5 1308 aa31.18■■■□□ 2.58
SNUPN-201ENST00000308588 NUDT16Q96DE0 195 aaKnown RBP31.18■■■□□ 2.58
SNUPN-201ENST00000308588 DDX17Q92841 729 aaKnown RBP31.17■■■□□ 2.58
SNUPN-201ENST00000308588 AHDC1Q5TGY3 1603 aaPredicted RBP31.17■■■□□ 2.58
SNUPN-201ENST00000308588 ATP7BP35670 1465 aa31.16■■■□□ 2.58
SNUPN-201ENST00000308588 SRPK2P78362 688 aaKnown RBP31.16■■■□□ 2.58
SNUPN-201ENST00000308588 CABP2Q9NPB3 220 aa31.16■■■□□ 2.58
SNUPN-201ENST00000308588 PHF8Q9UPP1 1060 aa31.14■■■□□ 2.58
SNUPN-201ENST00000308588 NHSL1Q5SYE7 1610 aa31.13■■■□□ 2.57
SNUPN-201ENST00000308588 PHLPP1O60346 1717 aa31.12■■■□□ 2.57
SNUPN-201ENST00000308588 FOXO3O43524 673 aa31.12■■■□□ 2.57
SNUPN-201ENST00000308588 PMFBP1Q8TBY8 1022 aa31.1■■■□□ 2.57
SNUPN-201ENST00000308588 CCDC61Q9Y6R9 512 aa31.1■■■□□ 2.57
SNUPN-201ENST00000308588 KIF1AQ12756 1690 aa31.09■■■□□ 2.57
SNUPN-201ENST00000308588 EIF4G2P78344 907 aaKnown RBP eCLIP31.09■■■□□ 2.57
SNUPN-201ENST00000308588 COL16A1Q07092 1604 aaPredicted RBP31.09■■■□□ 2.57
SNUPN-201ENST00000308588 NPHP3Q7Z494 1330 aa31.08■■■□□ 2.57
SNUPN-201ENST00000308588 SOS2Q07890 1332 aaPredicted RBP31.07■■■□□ 2.56
SNUPN-201ENST00000308588 SLC24A1O60721 1099 aa31.07■■■□□ 2.56
SNUPN-201ENST00000308588 HSPA5P11021 654 aaKnown RBP31.07■■■□□ 2.56
SNUPN-201ENST00000308588 TOPAZ1Q8N9V7 1692 aa31.06■■■□□ 2.56
SNUPN-201ENST00000308588 ITSN1Q15811 1721 aa31.05■■■□□ 2.56
SNUPN-201ENST00000308588 PLEKHG3A1L390 1219 aa31.03■■■□□ 2.56
SNUPN-201ENST00000308588 XPCQ01831 940 aaPredicted RBP31.03■■■□□ 2.56
SNUPN-201ENST00000308588 PXDNQ92626 1479 aa31.03■■■□□ 2.56
SNUPN-201ENST00000308588 PPIP5K1Q6PFW1 1433 aa31.01■■■□□ 2.56
SNUPN-201ENST00000308588 ATAD2Q6PL18 1390 aa31.01■■■□□ 2.55
SNUPN-201ENST00000308588 DISP3Q9P2K9 1392 aa31.01■■■□□ 2.55
SNUPN-201ENST00000308588 TMF1P82094 1093 aa31.01■■■□□ 2.55
SNUPN-201ENST00000308588 PUS7Q96PZ0 661 aaKnown RBP31.01■■■□□ 2.55
SNUPN-201ENST00000308588 NGDNQ8NEJ9 315 aaKnown RBP31■■■□□ 2.55
SNUPN-201ENST00000308588 CABP1Q9NZU7 370 aa31■■■□□ 2.55
SNUPN-201ENST00000308588 KRT28Q7Z3Y7 464 aa30.99■■■□□ 2.55
SNUPN-201ENST00000308588 LRRC59Q96AG4 307 aaKnown RBP30.99■■■□□ 2.55
SNUPN-201ENST00000308588 PSME1Q06323 249 aa30.98■■■□□ 2.55
SNUPN-201ENST00000308588 POLR3AO14802 1390 aaPredicted RBP30.98■■■□□ 2.55
SNUPN-201ENST00000308588 ACEP12821 1306 aa30.97■■■□□ 2.55
SNUPN-201ENST00000308588 JCADQ9P266 1359 aa30.96■■■□□ 2.55
SNUPN-201ENST00000308588 SPATA31A3Q5VYP0 1347 aa30.9■■■□□ 2.54
SNUPN-201ENST00000308588 SBNO1A3KN83 1393 aa30.89■■■□□ 2.54
SNUPN-201ENST00000308588 PNPLA6Q8IY17 1366 aa30.89■■■□□ 2.54
SNUPN-201ENST00000308588 ZEB1P37275 1124 aaPredicted RBP30.89■■■□□ 2.54
SNUPN-201ENST00000308588 CDCA8Q53HL2 280 aa30.89■■■□□ 2.54
SNUPN-201ENST00000308588 SLC12A5Q9H2X9 1139 aa30.89■■■□□ 2.54
SNUPN-201ENST00000308588 TMC1Q8TDI8 760 aa30.88■■■□□ 2.53
SNUPN-201ENST00000308588 SHPRHQ149N8 1683 aa30.88■■■□□ 2.53
SNUPN-201ENST00000308588 TRPM3Q9HCF6 1732 aaPredicted RBP30.87■■■□□ 2.53
SNUPN-201ENST00000308588 CPSF1Q10570 1443 aaKnown RBP30.85■■■□□ 2.53
SNUPN-201ENST00000308588 TNS3Q68CZ2 1445 aa30.85■■■□□ 2.53
SNUPN-201ENST00000308588 CD163L1Q9NR16 1453 aa30.84■■■□□ 2.53
SNUPN-201ENST00000308588 C11orf95C9JLR9 678 aaPredicted RBP30.83■■■□□ 2.53
SNUPN-201ENST00000308588 ZNF692Q9BU19 519 aaPredicted RBP30.83■■■□□ 2.53
SNUPN-201ENST00000308588 USP6P35125 1406 aa30.83■■■□□ 2.53
SNUPN-201ENST00000308588 NINLQ9Y2I6 1382 aa30.82■■■□□ 2.53
SNUPN-201ENST00000308588 SPATA31A6Q5VVP1 1343 aa30.82■■■□□ 2.52
SNUPN-201ENST00000308588 PAK3O75914 559 aaPredicted RBP30.81■■■□□ 2.52
SNUPN-201ENST00000308588 AKAP12Q02952 1782 aa30.8■■■□□ 2.52
SNUPN-201ENST00000308588 LMOD2Q6P5Q4 547 aa30.79■■■□□ 2.52
SNUPN-201ENST00000308588 SSH2Q76I76 1423 aa30.79■■■□□ 2.52
SNUPN-201ENST00000308588 BRD4O60885 1362 aaPredicted RBP30.79■■■□□ 2.52
SNUPN-201ENST00000308588 ALS2Q96Q42 1657 aa30.78■■■□□ 2.52
SNUPN-201ENST00000308588 COL22A1Q8NFW1 1626 aaPredicted RBP30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms