RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 CABP1Q9NZU7 370 aa12.13□□□□□ -0.47
TMOD3-201ENST00000308580 RAPGEF4Q8WZA2 1011 aa12.13□□□□□ -0.47
TMOD3-201ENST00000308580 RASSF8Q8NHQ8 419 aa12.12□□□□□ -0.47
TMOD3-201ENST00000308580 TMX4Q9H1E5 349 aaPredicted RBP12.12□□□□□ -0.47
TMOD3-201ENST00000308580 KIAA0586Q9BVV6 1533 aa12.12□□□□□ -0.47
TMOD3-201ENST00000308580 NLRP2Q9NX02 1062 aa12.12□□□□□ -0.47
TMOD3-201ENST00000308580 ABCA10Q8WWZ4 1543 aa12.12□□□□□ -0.47
TMOD3-201ENST00000308580 PDE3AQ14432 1141 aa12.12□□□□□ -0.47
TMOD3-201ENST00000308580 DNAJC5BQ9UF47 199 aa12.12□□□□□ -0.47
TMOD3-201ENST00000308580 ERBINQ96RT1 1412 aa12.12□□□□□ -0.47
TMOD3-201ENST00000308580 PDZRN3Q9UPQ7 1066 aa12.11□□□□□ -0.47
TMOD3-201ENST00000308580 C11orf95C9JLR9 678 aaPredicted RBP12.11□□□□□ -0.47
TMOD3-201ENST00000308580 AIMP1Q12904 312 aaKnown RBP12.11□□□□□ -0.47
TMOD3-201ENST00000308580 SLC52A1Q9NWF4 448 aa12.1□□□□□ -0.47
TMOD3-201ENST00000308580 CDK19Q9BWU1 502 aa12.1□□□□□ -0.47
TMOD3-201ENST00000308580 TWISTNBQ3B726 338 aaPredicted RBP12.1□□□□□ -0.47
TMOD3-201ENST00000308580 UBTFL1P0CB47 393 aaPredicted RBP12.1□□□□□ -0.47
TMOD3-201ENST00000308580 MCTP1Q6DN14 999 aa12.1□□□□□ -0.47
TMOD3-201ENST00000308580 NFKBIBQ15653 356 aa12.1□□□□□ -0.47
TMOD3-201ENST00000308580 SYTL4Q96C24 671 aaPredicted RBP12.1□□□□□ -0.47
TMOD3-201ENST00000308580 CDC45O75419 566 aa12.1□□□□□ -0.47
TMOD3-201ENST00000308580 HSP90AB4PQ58FF6 505 aa12.1□□□□□ -0.47
TMOD3-201ENST00000308580 ABTB2Q8N961 1025 aa12.09□□□□□ -0.47
TMOD3-201ENST00000308580 CREBRFQ8IUR6 639 aa12.09□□□□□ -0.47
TMOD3-201ENST00000308580 C1orf115Q9H7X2 142 aa12.09□□□□□ -0.47
TMOD3-201ENST00000308580 AMER1Q5JTC6 1135 aaPredicted RBP12.09□□□□□ -0.47
TMOD3-201ENST00000308580 ANKRD30BQ9BXX2 1392 aa12.08□□□□□ -0.47
TMOD3-201ENST00000308580 SUPT6HQ7KZ85 1726 aaKnown RBP12.08□□□□□ -0.48
TMOD3-201ENST00000308580 G3V3G9 751 aa12.08□□□□□ -0.48
TMOD3-201ENST00000308580 LRRFIP1Q32MZ4 808 aaKnown RBP12.08□□□□□ -0.48
TMOD3-201ENST00000308580 DCAF8Q5TAQ9 597 aa12.08□□□□□ -0.48
TMOD3-201ENST00000308580 RIC3Q7Z5B4 369 aa12.08□□□□□ -0.48
TMOD3-201ENST00000308580 NOB1Q9ULX3 412 aaKnown RBP12.08□□□□□ -0.48
TMOD3-201ENST00000308580 SULT6B1Q6IMI4 303 aa12.08□□□□□ -0.48
TMOD3-201ENST00000308580 GAS2L2Q8NHY3 880 aa12.08□□□□□ -0.48
TMOD3-201ENST00000308580 PCF11O94913 1555 aaKnown RBP12.07□□□□□ -0.48
TMOD3-201ENST00000308580 CHMP4CQ96CF2 233 aa12.07□□□□□ -0.48
TMOD3-201ENST00000308580 SMG6Q86US8 1419 aaKnown RBP12.07□□□□□ -0.48
TMOD3-201ENST00000308580 ATF3P18847 181 aa12.07□□□□□ -0.48
TMOD3-201ENST00000308580 RNF20Q5VTR2 975 aa12.07□□□□□ -0.48
TMOD3-201ENST00000308580 VPS37CA5D8V6 355 aaPredicted RBP12.07□□□□□ -0.48
TMOD3-201ENST00000308580 ARHGEF11O15085 1522 aa12.07□□□□□ -0.48
TMOD3-201ENST00000308580 ERC2O15083 957 aa12.07□□□□□ -0.48
TMOD3-201ENST00000308580 CPLX2Q6PUV4 134 aaKnown RBP12.07□□□□□ -0.48
TMOD3-201ENST00000308580 APPP05067 770 aa12.06□□□□□ -0.48
TMOD3-201ENST00000308580 GNAI3P08754 354 aa12.06□□□□□ -0.48
TMOD3-201ENST00000308580 NUCB2P80303 420 aa12.06□□□□□ -0.48
TMOD3-201ENST00000308580 BECN2A8MW95 431 aa12.06□□□□□ -0.48
TMOD3-201ENST00000308580 SURF6O75683 361 aaKnown RBP12.06□□□□□ -0.48
TMOD3-201ENST00000308580 ABCC5O15440 1437 aa12.06□□□□□ -0.48
TMOD3-201ENST00000308580 CCDC30Q5VVM6 783 aa12.06□□□□□ -0.48
TMOD3-201ENST00000308580 WDR63Q8IWG1 891 aa12.06□□□□□ -0.48
TMOD3-201ENST00000308580 ESCO1Q5FWF5 840 aa12.05□□□□□ -0.48
TMOD3-201ENST00000308580 SMC3Q9UQE7 1217 aa12.05□□□□□ -0.48
TMOD3-201ENST00000308580 PLB1Q6P1J6 1458 aa12.05□□□□□ -0.48
TMOD3-201ENST00000308580 GOLGA6L19H0YKK7 550 aa12.05□□□□□ -0.48
TMOD3-201ENST00000308580 CPLX1O14810 134 aa12.05□□□□□ -0.48
TMOD3-201ENST00000308580 SYNE3Q6ZMZ3 975 aa12.05□□□□□ -0.48
TMOD3-201ENST00000308580 NEUROD6Q96NK8 337 aa12.05□□□□□ -0.48
TMOD3-201ENST00000308580 AKAP17AQ02040 695 aaKnown RBP12.05□□□□□ -0.48
TMOD3-201ENST00000308580 BACH2Q9BYV9 841 aa12.05□□□□□ -0.48
TMOD3-201ENST00000308580 BICRAQ9NZM4 1560 aa12.04□□□□□ -0.48
TMOD3-201ENST00000308580 SLC4A2P04920 1241 aa12.04□□□□□ -0.48
TMOD3-201ENST00000308580 SLC26A8Q96RN1 970 aa12.04□□□□□ -0.48
TMOD3-201ENST00000308580 RPGRIP1LQ68CZ1 1315 aa12.04□□□□□ -0.48
TMOD3-201ENST00000308580 ATF7IPQ6VMQ6 1270 aa12.04□□□□□ -0.48
TMOD3-201ENST00000308580 GPRASP1Q5JY77 1395 aa12.04□□□□□ -0.48
TMOD3-201ENST00000308580 IQGAP2Q13576 1575 aa12.04□□□□□ -0.48
TMOD3-201ENST00000308580 ZNF692Q9BU19 519 aaPredicted RBP12.04□□□□□ -0.48
TMOD3-201ENST00000308580 CLASRPQ8N2M8 674 aaKnown RBP12.03□□□□□ -0.48
TMOD3-201ENST00000308580 MAGI1Q96QZ7 1491 aaPredicted RBP12.03□□□□□ -0.48
TMOD3-201ENST00000308580 BICD2Q8TD16 824 aa12.03□□□□□ -0.48
TMOD3-201ENST00000308580 CCDC141Q6ZP82 1450 aa12.03□□□□□ -0.48
TMOD3-201ENST00000308580 MARCH6O60337 910 aa12.02□□□□□ -0.48
TMOD3-201ENST00000308580 RTEL1-TNFRSF6BF6WH68 1400 aa12.02□□□□□ -0.49
TMOD3-201ENST00000308580 TRDNQ13061 729 aa12.02□□□□□ -0.49
TMOD3-201ENST00000308580 GCC1Q96CN9 775 aa12.02□□□□□ -0.49
TMOD3-201ENST00000308580 RRS1Q15050 365 aaKnown RBP12.02□□□□□ -0.49
TMOD3-201ENST00000308580 MVPQ14764 893 aaKnown RBP12.02□□□□□ -0.49
TMOD3-201ENST00000308580 WWC1Q8IX03 1113 aa12.02□□□□□ -0.49
TMOD3-201ENST00000308580 PLEKHO1Q53GL0 409 aaPredicted RBP12.02□□□□□ -0.49
TMOD3-201ENST00000308580 CAMSAP2Q08AD1 1489 aa12.01□□□□□ -0.49
TMOD3-201ENST00000308580 SLFN5Q08AF3 891 aa12.01□□□□□ -0.49
TMOD3-201ENST00000308580 HDGFL1Q5TGJ6 251 aa12.01□□□□□ -0.49
TMOD3-201ENST00000308580 CT47B1P0C2W7 299 aaPredicted RBP12.01□□□□□ -0.49
TMOD3-201ENST00000308580 PROSER2Q86WR7 435 aaPredicted RBP12.01□□□□□ -0.49
TMOD3-201ENST00000308580 NSD3Q9BZ95 1437 aa12.01□□□□□ -0.49
TMOD3-201ENST00000308580 PES1O00541 588 aaKnown RBP12.01□□□□□ -0.49
TMOD3-201ENST00000308580 ATAD2Q6PL18 1390 aa12.01□□□□□ -0.49
TMOD3-201ENST00000308580 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.01□□□□□ -0.49
TMOD3-201ENST00000308580 NEK4P51957 841 aa12.01□□□□□ -0.49
TMOD3-201ENST00000308580 THEMISQ8N1K5 641 aaPredicted RBP12.01□□□□□ -0.49
TMOD3-201ENST00000308580 TRIM29Q14134 588 aa12□□□□□ -0.49
TMOD3-201ENST00000308580 GNAI2P04899 355 aa12□□□□□ -0.49
TMOD3-201ENST00000308580 FSD1Q9BTV5 496 aa12□□□□□ -0.49
TMOD3-201ENST00000308580 MAP3K1Q13233 1512 aa12□□□□□ -0.49
TMOD3-201ENST00000308580 FOSBP53539 338 aa12□□□□□ -0.49
TMOD3-201ENST00000308580 NCOA1Q15788 1441 aa12□□□□□ -0.49
TMOD3-201ENST00000308580 WASHC4Q2M389 1173 aa11.99□□□□□ -0.49
TMOD3-201ENST00000308580 VPS37DQ86XT2 251 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms