RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 DCAF8L2P0C7V8 631 aa17.4■□□□□ 0.38
TMOD3-201ENST00000308580 NISCHQ9Y2I1 1504 aa17.04■□□□□ 0.32
TMOD3-201ENST00000308580 SUPT5HO00267 1087 aaKnown RBP16.66■□□□□ 0.26
TMOD3-201ENST00000308580 SHROOM4Q9ULL8 1493 aa16.44■□□□□ 0.22
TMOD3-201ENST00000308580 EHMT2Q96KQ7 1210 aa16.02■□□□□ 0.15
TMOD3-201ENST00000308580 FAM9AQ8IZU1 332 aaPredicted RBP15.69■□□□□ 0.1
TMOD3-201ENST00000308580 APLP2Q06481 763 aa15.55■□□□□ 0.08
TMOD3-201ENST00000308580 PCGF6Q9BYE7 350 aa15.54■□□□□ 0.08
TMOD3-201ENST00000308580 TTBK1Q5TCY1 1321 aaPredicted RBP15.47■□□□□ 0.07
TMOD3-201ENST00000308580 TRIM41Q8WV44 630 aa15.4■□□□□ 0.06
TMOD3-201ENST00000308580 RANGAP1P46060 587 aaPredicted RBP15.3■□□□□ 0.04
TMOD3-201ENST00000308580 PELP1Q8IZL8 1130 aaKnown RBP15.22■□□□□ 0.03
TMOD3-201ENST00000308580 UBTFP17480 764 aaKnown RBP15.15■□□□□ 0.02
TMOD3-201ENST00000308580 CCER1Q8TC90 406 aaPredicted RBP15.14■□□□□ 0.01
TMOD3-201ENST00000308580 ZEB1P37275 1124 aaPredicted RBP15.12■□□□□ 0.01
TMOD3-201ENST00000308580 ATP1B4Q9UN42 357 aaPredicted RBP15.06■□□□□ 0
TMOD3-201ENST00000308580 PPARGC1BQ86YN6 1023 aaKnown RBP15.02□□□□□ -0.01
TMOD3-201ENST00000308580 CENPBP07199 599 aaPredicted RBP14.97□□□□□ -0.01
TMOD3-201ENST00000308580 CHIC1Q5VXU3 224 aa14.95□□□□□ -0.02
TMOD3-201ENST00000308580 LOC105371045A0A1W2PR82 267 aa14.91□□□□□ -0.02
TMOD3-201ENST00000308580 TRIM26Q12899 539 aaPredicted RBP14.88□□□□□ -0.03
TMOD3-201ENST00000308580 HRCP23327 699 aa14.78□□□□□ -0.04
TMOD3-201ENST00000308580 YTHDC1Q96MU7 727 aaKnown RBP14.77□□□□□ -0.05
TMOD3-201ENST00000308580 ITGAEP38570 1179 aa14.67□□□□□ -0.06
TMOD3-201ENST00000308580 HNRNPUL2Q1KMD3 747 aaKnown RBP14.63□□□□□ -0.07
TMOD3-201ENST00000308580 NEFLP07196 543 aa14.59□□□□□ -0.07
TMOD3-201ENST00000308580 ERICH6Q7L0X2 663 aa14.59□□□□□ -0.07
TMOD3-201ENST00000308580 ABCC9O60706 1549 aa14.58□□□□□ -0.08
TMOD3-201ENST00000308580 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
TMOD3-201ENST00000308580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.53□□□□□ -0.08
TMOD3-201ENST00000308580 POLR3GLQ9BT43 218 aa14.4□□□□□ -0.1
TMOD3-201ENST00000308580 MYT1LQ9UL68 1186 aa14.36□□□□□ -0.11
TMOD3-201ENST00000308580 CNGB1Q14028 1251 aaPredicted RBP14.31□□□□□ -0.12
TMOD3-201ENST00000308580 DIEXFQ68CQ4 756 aaKnown RBP14.31□□□□□ -0.12
TMOD3-201ENST00000308580 FAM50AQ14320 339 aaKnown RBP14.29□□□□□ -0.12
TMOD3-201ENST00000308580 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
TMOD3-201ENST00000308580 NEUROD1Q13562 356 aa14.16□□□□□ -0.14
TMOD3-201ENST00000308580 TRIM52Q96A61 297 aa14.16□□□□□ -0.14
TMOD3-201ENST00000308580 ZCCHC6Q5VYS8 1495 aaKnown RBP14.13□□□□□ -0.15
TMOD3-201ENST00000308580 MYT1Q01538 1121 aa14.1□□□□□ -0.15
TMOD3-201ENST00000308580 P3H3Q8IVL6 736 aa14.06□□□□□ -0.16
TMOD3-201ENST00000308580 SCRIBQ14160 1630 aa14.04□□□□□ -0.16
TMOD3-201ENST00000308580 DAXXQ9UER7 740 aaPredicted RBP14.03□□□□□ -0.16
TMOD3-201ENST00000308580 FBLN2P98095 1184 aa14.03□□□□□ -0.16
TMOD3-201ENST00000308580 SLC4A1APQ9BWU0 796 aaKnown RBP14.03□□□□□ -0.16
TMOD3-201ENST00000308580 ZNF316A6NFI3 1004 aaPredicted RBP14.02□□□□□ -0.17
TMOD3-201ENST00000308580 ZNF326Q5BKZ1 582 aaKnown RBP14□□□□□ -0.17
TMOD3-201ENST00000308580 GTF3C3Q9Y5Q9 886 aa13.99□□□□□ -0.17
TMOD3-201ENST00000308580 ARID3CA6NKF2 412 aa13.98□□□□□ -0.17
TMOD3-201ENST00000308580 ANP32CO43423 234 aa13.95□□□□□ -0.18
TMOD3-201ENST00000308580 BCANQ96GW7 911 aa13.94□□□□□ -0.18
TMOD3-201ENST00000308580 DCAF1Q9Y4B6 1507 aa13.88□□□□□ -0.19
TMOD3-201ENST00000308580 CLSPNQ9HAW4 1339 aa13.85□□□□□ -0.19
TMOD3-201ENST00000308580 ZNF777Q9ULD5 760 aaPredicted RBP13.83□□□□□ -0.2
TMOD3-201ENST00000308580 ACIN1Q9UKV3 1341 aaKnown RBP13.83□□□□□ -0.2
TMOD3-201ENST00000308580 CCDC180Q9P1Z9 1646 aa13.8□□□□□ -0.2
TMOD3-201ENST00000308580 CDK11AQ9UQ88 783 aaPredicted RBP13.77□□□□□ -0.21
TMOD3-201ENST00000308580 RTL5Q5HYW3 569 aaPredicted RBP13.76□□□□□ -0.21
TMOD3-201ENST00000308580 RSF1Q96T23 1441 aaPredicted RBP13.74□□□□□ -0.21
TMOD3-201ENST00000308580 MYO15BQ96JP2 1530 aa13.73□□□□□ -0.21
TMOD3-201ENST00000308580 TONSLQ96HA7 1378 aa13.7□□□□□ -0.22
TMOD3-201ENST00000308580 DDX10Q13206 875 aaKnown RBP13.67□□□□□ -0.22
TMOD3-201ENST00000308580 CHIC2Q9UKJ5 165 aa13.67□□□□□ -0.22
TMOD3-201ENST00000308580 CLIP1P30622 1438 aa13.66□□□□□ -0.22
TMOD3-201ENST00000308580 CANXP27824 592 aaKnown RBP13.59□□□□□ -0.23
TMOD3-201ENST00000308580 HNRNPUQ00839 825 aaKnown RBP eCLIP13.59□□□□□ -0.23
TMOD3-201ENST00000308580 FKBP8Q14318 412 aa13.58□□□□□ -0.24
TMOD3-201ENST00000308580 MTUS2Q5JR59 1369 aa13.58□□□□□ -0.24
TMOD3-201ENST00000308580 RB1CC1Q8TDY2 1594 aa13.57□□□□□ -0.24
TMOD3-201ENST00000308580 CEP162Q5TB80 1403 aa13.57□□□□□ -0.24
TMOD3-201ENST00000308580 FAM9BQ8IZU0 186 aa13.55□□□□□ -0.24
TMOD3-201ENST00000308580 EEA1Q15075 1411 aa13.55□□□□□ -0.24
TMOD3-201ENST00000308580 WRNQ14191 1432 aaPredicted RBP eCLIP13.54□□□□□ -0.24
TMOD3-201ENST00000308580 BCL11AQ9H165 835 aa13.54□□□□□ -0.24
TMOD3-201ENST00000308580 CHGAP10645 457 aaKnown RBP13.54□□□□□ -0.24
TMOD3-201ENST00000308580 ZBTB47Q9UFB7 747 aaPredicted RBP13.54□□□□□ -0.24
TMOD3-201ENST00000308580 MIER1Q8N108 512 aa13.53□□□□□ -0.24
TMOD3-201ENST00000308580 GOLGA3Q08378 1498 aa13.53□□□□□ -0.24
TMOD3-201ENST00000308580 HIRIP3Q9BW71 556 aaPredicted RBP13.53□□□□□ -0.24
TMOD3-201ENST00000308580 NEFMP07197 916 aa13.52□□□□□ -0.24
TMOD3-201ENST00000308580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.52□□□□□ -0.25
TMOD3-201ENST00000308580 TSPY4P0CV99 314 aa13.5□□□□□ -0.25
TMOD3-201ENST00000308580 TSPY10P0CW01 314 aa13.5□□□□□ -0.25
TMOD3-201ENST00000308580 SLC24A1O60721 1099 aa13.5□□□□□ -0.25
TMOD3-201ENST00000308580 CHMP7Q8WUX9 453 aaPredicted RBP13.49□□□□□ -0.25
TMOD3-201ENST00000308580 NACADO15069 1562 aa13.48□□□□□ -0.25
TMOD3-201ENST00000308580 SALL2Q9Y467 1007 aaPredicted RBP13.48□□□□□ -0.25
TMOD3-201ENST00000308580 RRP7BPQ9NSQ0 103 aa13.48□□□□□ -0.25
TMOD3-201ENST00000308580 KDM2AQ9Y2K7 1162 aa13.47□□□□□ -0.25
TMOD3-201ENST00000308580 TNIKQ9UKE5 1360 aa13.47□□□□□ -0.25
TMOD3-201ENST00000308580 CECR2Q9BXF3 1484 aa13.46□□□□□ -0.25
TMOD3-201ENST00000308580 NPM1P06748 294 aaKnown RBP eCLIP13.46□□□□□ -0.25
TMOD3-201ENST00000308580 BAZ1BQ9UIG0 1483 aaKnown RBP13.46□□□□□ -0.26
TMOD3-201ENST00000308580 ANP32AP39687 249 aaKnown RBP13.46□□□□□ -0.26
TMOD3-201ENST00000308580 NPM2Q86SE8 214 aaKnown RBP13.45□□□□□ -0.26
TMOD3-201ENST00000308580 TMC1Q8TDI8 760 aa13.44□□□□□ -0.26
TMOD3-201ENST00000308580 MRS2Q9HD23 443 aa13.44□□□□□ -0.26
TMOD3-201ENST00000308580 ESF1Q9H501 851 aaKnown RBP13.43□□□□□ -0.26
TMOD3-201ENST00000308580 SCAF1Q9H7N4 1312 aaKnown RBP13.42□□□□□ -0.26
TMOD3-201ENST00000308580 STAG3Q9UJ98 1225 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms