RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 C1orf141Q5JVX7 400 aa18.69■□□□□ 0.58
LEMD3-201ENST00000308330 ZSCAN30Q86W11 494 aa18.69■□□□□ 0.58
LEMD3-201ENST00000308330 ARHGEF11O15085 1522 aa18.69■□□□□ 0.58
LEMD3-201ENST00000308330 TEFQ10587 303 aa18.69■□□□□ 0.58
LEMD3-201ENST00000308330 GTF2E1P29083 439 aaPredicted RBP18.68■□□□□ 0.58
LEMD3-201ENST00000308330 CCDC39Q9UFE4 941 aa18.68■□□□□ 0.58
LEMD3-201ENST00000308330 TRAK2O60296 914 aa18.68■□□□□ 0.58
LEMD3-201ENST00000308330 SYTL4Q96C24 671 aaPredicted RBP18.67■□□□□ 0.58
LEMD3-201ENST00000308330 PRAM1Q96QH2 718 aa18.67■□□□□ 0.58
LEMD3-201ENST00000308330 ELL2O00472 640 aaPredicted RBP18.66■□□□□ 0.58
LEMD3-201ENST00000308330 PDCL2Q8N4E4 241 aa18.66■□□□□ 0.58
LEMD3-201ENST00000308330 GGNBP2Q9H3C7 697 aa18.66■□□□□ 0.58
LEMD3-201ENST00000308330 EHBP1L1Q8N3D4 1523 aa18.66■□□□□ 0.58
LEMD3-201ENST00000308330 ZRSR1Q15695 479 aaKnown RBP18.66■□□□□ 0.58
LEMD3-201ENST00000308330 PMFBP1Q8TBY8 1022 aa18.66■□□□□ 0.58
LEMD3-201ENST00000308330 RCAN3Q9UKA8 241 aa18.66■□□□□ 0.58
LEMD3-201ENST00000308330 HECW1Q76N89 1606 aa18.66■□□□□ 0.58
LEMD3-201ENST00000308330 CHMP5Q9NZZ3 219 aa18.66■□□□□ 0.58
LEMD3-201ENST00000308330 CEBPAP49715 358 aaPredicted RBP18.65■□□□□ 0.58
LEMD3-201ENST00000308330 TRERF1Q96PN7 1200 aa18.65■□□□□ 0.58
LEMD3-201ENST00000308330 SMC4Q9NTJ3 1288 aa18.65■□□□□ 0.58
LEMD3-201ENST00000308330 SLC4A10Q6U841 1118 aa18.65■□□□□ 0.58
LEMD3-201ENST00000308330 CNPY4Q8N129 248 aa18.65■□□□□ 0.58
LEMD3-201ENST00000308330 DYNC1I1O14576 645 aa18.65■□□□□ 0.58
LEMD3-201ENST00000308330 RDXP35241 583 aaKnown RBP18.64■□□□□ 0.57
LEMD3-201ENST00000308330 CHMP3Q9Y3E7 222 aa18.64■□□□□ 0.57
LEMD3-201ENST00000308330 NBPF1Q3BBV0 1214 aa18.64■□□□□ 0.57
LEMD3-201ENST00000308330 TMX4Q9H1E5 349 aaPredicted RBP18.64■□□□□ 0.57
LEMD3-201ENST00000308330 NLRP2Q9NX02 1062 aa18.64■□□□□ 0.57
LEMD3-201ENST00000308330 MYBBP1AQ9BQG0 1328 aaKnown RBP18.63■□□□□ 0.57
LEMD3-201ENST00000308330 DIAPH1O60610 1272 aaKnown RBP18.63■□□□□ 0.57
LEMD3-201ENST00000308330 ITPRIPQ8IWB1 547 aa18.62■□□□□ 0.57
LEMD3-201ENST00000308330 ZNF622Q969S3 477 aaKnown RBP eCLIP18.62■□□□□ 0.572e-6■□□□□ 8.5
LEMD3-201ENST00000308330 CLUAP1Q96AJ1 413 aa18.62■□□□□ 0.57
LEMD3-201ENST00000308330 TAOK2Q9UL54 1235 aa18.62■□□□□ 0.57
LEMD3-201ENST00000308330 ABTB2Q8N961 1025 aa18.62■□□□□ 0.57
LEMD3-201ENST00000308330 RBM25P49756 843 aaKnown RBP18.62■□□□□ 0.57
LEMD3-201ENST00000308330 HFM1A2PYH4 1435 aa18.62■□□□□ 0.57
LEMD3-201ENST00000308330 RRBP1Q9P2E9 1410 aaKnown RBP18.61■□□□□ 0.57
LEMD3-201ENST00000308330 SASS6Q6UVJ0 657 aa18.61■□□□□ 0.57
LEMD3-201ENST00000308330 RAPGEF4Q8WZA2 1011 aa18.61■□□□□ 0.57
LEMD3-201ENST00000308330 GPRASP1Q5JY77 1395 aa18.61■□□□□ 0.57
LEMD3-201ENST00000308330 PRKRIP1Q9H875 184 aaPredicted RBP18.6■□□□□ 0.57
LEMD3-201ENST00000308330 RRAGDQ9NQL2 400 aaPredicted RBP18.6■□□□□ 0.57
LEMD3-201ENST00000308330 TDO2P48775 406 aa18.6■□□□□ 0.57
LEMD3-201ENST00000308330 TRIM6-TRIM34B2RNG4 842 aa18.6■□□□□ 0.57
LEMD3-201ENST00000308330 TRIM34Q9BYJ4 488 aa18.6■□□□□ 0.57
LEMD3-201ENST00000308330 ADGRL1O94910 1474 aa18.59■□□□□ 0.57
LEMD3-201ENST00000308330 CCDC94Q9BW85 323 aaPredicted RBP18.58■□□□□ 0.57
LEMD3-201ENST00000308330 TTC5Q8N0Z6 440 aa18.58■□□□□ 0.56
LEMD3-201ENST00000308330 BANK1Q8NDB2 785 aa18.58■□□□□ 0.56
LEMD3-201ENST00000308330 DAPK1P53355 1430 aa18.58■□□□□ 0.56
LEMD3-201ENST00000308330 CUL7Q14999 1698 aa18.57■□□□□ 0.56
LEMD3-201ENST00000308330 PHF14O94880 888 aa18.57■□□□□ 0.56
LEMD3-201ENST00000308330 HSP90AB3PQ58FF7 597 aa18.57■□□□□ 0.56
LEMD3-201ENST00000308330 FBXO31Q5XUX0 539 aaPredicted RBP18.57■□□□□ 0.56
LEMD3-201ENST00000308330 USP8P40818 1118 aa18.57■□□□□ 0.56
LEMD3-201ENST00000308330 PIP4K2BP78356 416 aa18.56■□□□□ 0.56
LEMD3-201ENST00000308330 APAF1O14727 1248 aa18.55■□□□□ 0.56
LEMD3-201ENST00000308330 NGEFQ8N5V2 710 aa18.55■□□□□ 0.56
LEMD3-201ENST00000308330 ZNF592Q92610 1267 aa18.55■□□□□ 0.56
LEMD3-201ENST00000308330 BACH2Q9BYV9 841 aa18.55■□□□□ 0.56
LEMD3-201ENST00000308330 GORABQ5T7V8 394 aa18.55■□□□□ 0.56
LEMD3-201ENST00000308330 PHF23Q9BUL5 403 aaPredicted RBP18.55■□□□□ 0.56
LEMD3-201ENST00000308330 TIAM1Q13009 1591 aa18.54■□□□□ 0.56
LEMD3-201ENST00000308330 KIAA1107Q9UPP5 1409 aa18.54■□□□□ 0.56
LEMD3-201ENST00000308330 TEX2Q8IWB9 1127 aa18.54■□□□□ 0.56
LEMD3-201ENST00000308330 SLC12A5Q9H2X9 1139 aa18.53■□□□□ 0.56
LEMD3-201ENST00000308330 ARGLU1Q9NWB6 273 aaPredicted RBP18.53■□□□□ 0.56
LEMD3-201ENST00000308330 NUTM2BA6NNL0 878 aaPredicted RBP18.53■□□□□ 0.56
LEMD3-201ENST00000308330 NUTM2EB1AL46 878 aaPredicted RBP18.53■□□□□ 0.56
LEMD3-201ENST00000308330 HMOX1P09601 288 aa18.53■□□□□ 0.56
LEMD3-201ENST00000308330 NUTM2AQ8IVF1 878 aaPredicted RBP18.53■□□□□ 0.56
LEMD3-201ENST00000308330 GIMAP7Q8NHV1 300 aa18.53■□□□□ 0.56
LEMD3-201ENST00000308330 EIF2S2P20042 333 aaKnown RBP18.53■□□□□ 0.56
LEMD3-201ENST00000308330 EXOC6Q8TAG9 804 aa18.53■□□□□ 0.56
LEMD3-201ENST00000308330 CCDC141Q6ZP82 1450 aa18.52■□□□□ 0.56
LEMD3-201ENST00000308330 KIF7Q2M1P5 1343 aa18.52■□□□□ 0.56
LEMD3-201ENST00000308330 CTR9Q6PD62 1173 aa18.52■□□□□ 0.56
LEMD3-201ENST00000308330 LEKR1Q6ZMV7 388 aa18.52■□□□□ 0.56
LEMD3-201ENST00000308330 DENND4BO75064 1496 aaPredicted RBP18.52■□□□□ 0.55
LEMD3-201ENST00000308330 CDK19Q9BWU1 502 aa18.51■□□□□ 0.55
LEMD3-201ENST00000308330 CABP1Q9NZU7 370 aa18.51■□□□□ 0.55
LEMD3-201ENST00000308330 STRN4Q9NRL3 753 aa18.51■□□□□ 0.55
LEMD3-201ENST00000308330 RPGRIP1LQ68CZ1 1315 aa18.51■□□□□ 0.55
LEMD3-201ENST00000308330 BCL2L13Q9BXK5 485 aa18.51■□□□□ 0.55
LEMD3-201ENST00000308330 ZBED9Q6R2W3 1325 aa18.5■□□□□ 0.55
LEMD3-201ENST00000308330 IDI1Q13907 227 aa18.5■□□□□ 0.55
LEMD3-201ENST00000308330 CENPQQ7L2Z9 268 aaPredicted RBP18.5■□□□□ 0.55
LEMD3-201ENST00000308330 PDE3BQ13370 1112 aa18.5■□□□□ 0.55
LEMD3-201ENST00000308330 G3V3G9 751 aa18.5■□□□□ 0.55
LEMD3-201ENST00000308330 MFAP1P55081 439 aaKnown RBP18.5■□□□□ 0.55
LEMD3-201ENST00000308330 RIPK4P57078 832 aa18.5■□□□□ 0.55
LEMD3-201ENST00000308330 DCAF8Q5TAQ9 597 aa18.5■□□□□ 0.55
LEMD3-201ENST00000308330 PSMD1Q99460 953 aa18.49■□□□□ 0.55
LEMD3-201ENST00000308330 SPDYE4A6NLX3 237 aa18.49■□□□□ 0.55
LEMD3-201ENST00000308330 H0YHG0 523 aa18.49■□□□□ 0.55
LEMD3-201ENST00000308330 AK7Q96M32 723 aa18.49■□□□□ 0.55
LEMD3-201ENST00000308330 PAIP2Q9BPZ3 127 aaKnown RBP18.49■□□□□ 0.55
LEMD3-201ENST00000308330 FANCAO15360 1455 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms