RNA–Protein interactions for RNA: ENST00000308008.10

RAPGEF6-202, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-202ENST00000308008 CLCN1P35523 988 aa4.24□□□□□ -1.73
RAPGEF6-202ENST00000308008 TICAM2Q86XR7 235 aa4.24□□□□□ -1.73
RAPGEF6-202ENST00000308008 IPO4Q8TEX9 1081 aaKnown RBP4.24□□□□□ -1.73
RAPGEF6-202ENST00000308008 NPATQ14207 1427 aa4.24□□□□□ -1.73
RAPGEF6-202ENST00000308008 WWC1Q8IX03 1113 aa4.24□□□□□ -1.73
RAPGEF6-202ENST00000308008 PROCA1Q8NCQ7 364 aaPredicted RBP4.24□□□□□ -1.73
RAPGEF6-202ENST00000308008 GIPC2Q8TF65 315 aa4.24□□□□□ -1.73
RAPGEF6-202ENST00000308008 AKNAQ7Z591 1439 aa4.24□□□□□ -1.73
RAPGEF6-202ENST00000308008 YEATS2Q9ULM3 1422 aa4.24□□□□□ -1.73
RAPGEF6-202ENST00000308008 CSPP1Q1MSJ5 1256 aa4.24□□□□□ -1.73
RAPGEF6-202ENST00000308008 PRDM10Q9NQV6 1147 aa4.24□□□□□ -1.73
RAPGEF6-202ENST00000308008 SETD1BQ9UPS6 1966 aaKnown RBP4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 MARCH6O60337 910 aa4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 FRAT2O75474 233 aaPredicted RBP4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 GLMNQ92990 594 aa4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 BIN2Q9UBW5 565 aaPredicted RBP4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 ABCA8O94911 1581 aa4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 BRD1O95696 1058 aa4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 GIGYF2Q6Y7W6 1299 aaKnown RBP4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 SND1Q7KZF4 910 aaKnown RBP eCLIP4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 COG6Q9Y2V7 657 aa4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 POM121CA8CG34 1229 aa4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 ZSCAN20P17040 1043 aaPredicted RBP4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 SKIV2LQ15477 1246 aaKnown RBP4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 DDX27Q96GQ7 796 aaKnown RBP4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 HIRIP3Q9BW71 556 aaPredicted RBP4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 BCL2L13Q9BXK5 485 aa4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 BACH2Q9BYV9 841 aa4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 SNRKQ9NRH2 765 aa4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 SLC52A1Q9NWF4 448 aa4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 RIMS1Q86UR5 1692 aaKnown RBP4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 CDK13Q14004 1512 aaKnown RBP4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 TNIKQ9UKE5 1360 aa4.23□□□□□ -1.73
RAPGEF6-202ENST00000308008 DPYSL4O14531 572 aa4.22□□□□□ -1.73
RAPGEF6-202ENST00000308008 DRC1Q96MC2 740 aa4.22□□□□□ -1.73
RAPGEF6-202ENST00000308008 DNAJC2Q99543 621 aaKnown RBP4.22□□□□□ -1.73
RAPGEF6-202ENST00000308008 PATL2C9JE40 543 aaKnown RBP4.22□□□□□ -1.73
RAPGEF6-202ENST00000308008 SLC34A2O95436 690 aa4.22□□□□□ -1.73
RAPGEF6-202ENST00000308008 SECISBP2LQ93073 1101 aaKnown RBP4.22□□□□□ -1.73
RAPGEF6-202ENST00000308008 PANK2Q9BZ23 570 aa4.22□□□□□ -1.73
RAPGEF6-202ENST00000308008 POGKQ9P215 609 aa4.22□□□□□ -1.73
RAPGEF6-202ENST00000308008 EEA1Q15075 1411 aa4.22□□□□□ -1.73
RAPGEF6-202ENST00000308008 UNC13BO14795 1591 aa4.22□□□□□ -1.73
RAPGEF6-202ENST00000308008 FSD2A1L4K1 749 aa4.22□□□□□ -1.73
RAPGEF6-202ENST00000308008 SLC4A3P48751 1232 aa4.22□□□□□ -1.73
RAPGEF6-202ENST00000308008 ZNF467Q7Z7K2 595 aaPredicted RBP4.22□□□□□ -1.73
RAPGEF6-202ENST00000308008 COL24A1Q17RW2 1714 aa4.22□□□□□ -1.73
RAPGEF6-202ENST00000308008 PEX14O75381 377 aa4.21□□□□□ -1.73
RAPGEF6-202ENST00000308008 TCF3P15923 654 aa4.21□□□□□ -1.73
RAPGEF6-202ENST00000308008 NUBP1P53384 320 aa4.21□□□□□ -1.73
RAPGEF6-202ENST00000308008 FAM50AQ14320 339 aaKnown RBP4.21□□□□□ -1.73
RAPGEF6-202ENST00000308008 CLEC11AQ9Y240 323 aa4.21□□□□□ -1.73
RAPGEF6-202ENST00000308008 SOGA1O94964 1423 aa4.21□□□□□ -1.73
RAPGEF6-202ENST00000308008 RGPD3A6NKT7 1758 aaPredicted RBP4.21□□□□□ -1.74
RAPGEF6-202ENST00000308008 RGPD4Q7Z3J3 1758 aa4.21□□□□□ -1.74
RAPGEF6-202ENST00000308008 XRCC6P12956 609 aaKnown RBP eCLIP4.21□□□□□ -1.74
RAPGEF6-202ENST00000308008 PTMSP20962 102 aa4.21□□□□□ -1.74
RAPGEF6-202ENST00000308008 GLIPR1L2Q4G1C9 344 aa4.21□□□□□ -1.74
RAPGEF6-202ENST00000308008 NAP1L5Q96NT1 182 aaPredicted RBP4.21□□□□□ -1.74
RAPGEF6-202ENST00000308008 PDCL3Q9H2J4 239 aa4.21□□□□□ -1.74
RAPGEF6-202ENST00000308008 PCDHB8Q9UN66 801 aa4.21□□□□□ -1.74
RAPGEF6-202ENST00000308008 PCDHB13Q9Y5F0 798 aa4.21□□□□□ -1.74
RAPGEF6-202ENST00000308008 FHOD3Q2V2M9 1422 aa4.21□□□□□ -1.74
RAPGEF6-202ENST00000308008 C9orf131Q5VYM1 1079 aa4.21□□□□□ -1.74
RAPGEF6-202ENST00000308008 RBM27Q9P2N5 1060 aaKnown RBP4.21□□□□□ -1.74
RAPGEF6-202ENST00000308008 AMOTL2Q9Y2J4 779 aa4.21□□□□□ -1.74
RAPGEF6-202ENST00000308008 ZBTB12Q9Y330 459 aaPredicted RBP4.21□□□□□ -1.74
RAPGEF6-202ENST00000308008 CAMSAP2Q08AD1 1489 aa4.21□□□□□ -1.74
RAPGEF6-202ENST00000308008 RTL5Q5HYW3 569 aaPredicted RBP4.21□□□□□ -1.74
RAPGEF6-202ENST00000308008 TSPYL2Q9H2G4 693 aaPredicted RBP4.21□□□□□ -1.74
RAPGEF6-202ENST00000308008 UGGT2Q9NYU1 1516 aa4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 TCOF1Q13428 1488 aaKnown RBP4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 VGLL3A8MV65 326 aa4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 MS4A1P11836 297 aa4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 KCNA1Q09470 495 aa4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 ZNF326Q5BKZ1 582 aaKnown RBP4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 GORABQ5T7V8 394 aa4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 NLRP7Q8WX94 980 aa4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 SREK1Q8WXA9 508 aaKnown RBP4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 SPATA32Q96LK8 384 aa4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 MFRPQ9BY79 579 aa4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 CLIP1P30622 1438 aa4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 RASEFQ8IZ41 740 aa4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 ZHX1Q9UKY1 873 aaPredicted RBP4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 FECHP22830 423 aa4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 LMOD1P29536 600 aaPredicted RBP4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 TSNAXIP1Q2TAA8 658 aa4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 PBXIP1Q96AQ6 731 aa4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 MYH16Q9H6N6 1097 aa4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 PRDM16Q9HAZ2 1276 aa4.2□□□□□ -1.74
RAPGEF6-202ENST00000308008 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.19□□□□□ -1.74
RAPGEF6-202ENST00000308008 MDM2Q00987 491 aaPredicted RBP4.19□□□□□ -1.74
RAPGEF6-202ENST00000308008 MICAL1Q8TDZ2 1067 aa4.19□□□□□ -1.74
RAPGEF6-202ENST00000308008 FANCAO15360 1455 aa4.19□□□□□ -1.74
RAPGEF6-202ENST00000308008 USP19O94966 1318 aa4.19□□□□□ -1.74
RAPGEF6-202ENST00000308008 IRF6O14896 467 aa4.19□□□□□ -1.74
RAPGEF6-202ENST00000308008 PDE4AP27815 886 aa4.19□□□□□ -1.74
RAPGEF6-202ENST00000308008 ZNF662Q6ZS27 426 aa4.19□□□□□ -1.74
RAPGEF6-202ENST00000308008 VRTNQ9H8Y1 702 aa4.19□□□□□ -1.74
RAPGEF6-202ENST00000308008 IGSF5Q9NSI5 407 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms