RNA–Protein interactions for RNA: ENST00000303577.6

PCBP1-201, Transcript of poly(rC) binding protein 1, humanhuman

APPRIS P1 BASIC

Gene PCBP1, Length 1,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP1-201ENST00000303577 YTHDC1Q96MU7 727 aaKnown RBP22.5■■□□□ 1.19
PCBP1-201ENST00000303577 TMEM94Q12767 1356 aa22.49■■□□□ 1.19
PCBP1-201ENST00000303577 WAPLQ7Z5K2 1190 aa22.49■■□□□ 1.19
PCBP1-201ENST00000303577 NALCNQ8IZF0 1738 aa22.49■■□□□ 1.19
PCBP1-201ENST00000303577 DLC1Q96QB1 1528 aa22.48■■□□□ 1.19
PCBP1-201ENST00000303577 SAFB2Q14151 953 aaKnown RBP eCLIP22.47■■□□□ 1.19
PCBP1-201ENST00000303577 PRAM1Q96QH2 718 aa22.46■■□□□ 1.19
PCBP1-201ENST00000303577 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.46■■□□□ 1.19
PCBP1-201ENST00000303577 QRICH2Q9H0J4 1663 aa22.43■■□□□ 1.18
PCBP1-201ENST00000303577 EIF3AQ14152 1382 aaKnown RBP22.43■■□□□ 1.18
PCBP1-201ENST00000303577 TESK2Q96S53 571 aa22.43■■□□□ 1.18
PCBP1-201ENST00000303577 FAM135BQ49AJ0 1406 aa22.43■■□□□ 1.18
PCBP1-201ENST00000303577 CCER2I3L3R5 266 aa22.43■■□□□ 1.18
PCBP1-201ENST00000303577 CENPBP07199 599 aaPredicted RBP22.43■■□□□ 1.18
PCBP1-201ENST00000303577 C14orf37Q86TY3 774 aa22.42■■□□□ 1.18
PCBP1-201ENST00000303577 POGKQ9P215 609 aa22.42■■□□□ 1.18
PCBP1-201ENST00000303577 CERKQ8TCT0 537 aa22.4■■□□□ 1.18
PCBP1-201ENST00000303577 ADGRL3Q9HAR2 1447 aa22.39■■□□□ 1.18
PCBP1-201ENST00000303577 TMF1P82094 1093 aa22.39■■□□□ 1.17
PCBP1-201ENST00000303577 DISP3Q9P2K9 1392 aa22.39■■□□□ 1.17
PCBP1-201ENST00000303577 SIRT1Q96EB6 747 aa22.38■■□□□ 1.17
PCBP1-201ENST00000303577 MINK1Q8N4C8 1332 aaPredicted RBP22.37■■□□□ 1.17
PCBP1-201ENST00000303577 CENPJQ9HC77 1338 aaPredicted RBP22.37■■□□□ 1.17
PCBP1-201ENST00000303577 MSH6P52701 1360 aa22.35■■□□□ 1.17
PCBP1-201ENST00000303577 NCOA3Q9Y6Q9 1424 aa22.34■■□□□ 1.17
PCBP1-201ENST00000303577 ADGRB2O60241 1585 aa22.34■■□□□ 1.17
PCBP1-201ENST00000303577 CDC42BPGQ6DT37 1551 aa22.33■■□□□ 1.17
PCBP1-201ENST00000303577 PRKRIP1Q9H875 184 aaPredicted RBP22.32■■□□□ 1.16
PCBP1-201ENST00000303577 IQSEC2Q5JU85 1478 aa22.32■■□□□ 1.16
PCBP1-201ENST00000303577 C19orf44Q9H6X5 657 aa22.31■■□□□ 1.16
PCBP1-201ENST00000303577 FMN2Q9NZ56 1722 aa22.3■■□□□ 1.16
PCBP1-201ENST00000303577 TULP4Q9NRJ4 1543 aa22.3■■□□□ 1.16
PCBP1-201ENST00000303577 CDCA8Q53HL2 280 aa22.29■■□□□ 1.16
PCBP1-201ENST00000303577 NUTM2FA1L443 756 aa22.28■■□□□ 1.16
PCBP1-201ENST00000303577 SLC24A1O60721 1099 aa22.28■■□□□ 1.16
PCBP1-201ENST00000303577 DCCP43146 1447 aa22.27■■□□□ 1.16
PCBP1-201ENST00000303577 RGPD8O14715 1765 aaPredicted RBP22.27■■□□□ 1.16
PCBP1-201ENST00000303577 ATF3P18847 181 aa22.27■■□□□ 1.16
PCBP1-201ENST00000303577 USP32Q8NFA0 1604 aa22.26■■□□□ 1.15
PCBP1-201ENST00000303577 UBAP1LF5GYI3 381 aa22.25■■□□□ 1.15
PCBP1-201ENST00000303577 MST1RQ04912 1400 aa22.25■■□□□ 1.15
PCBP1-201ENST00000303577 SBNO2Q9Y2G9 1366 aa22.25■■□□□ 1.15
PCBP1-201ENST00000303577 CADPS2Q86UW7 1296 aa22.23■■□□□ 1.15
PCBP1-201ENST00000303577 WASLO00401 505 aaPredicted RBP22.22■■□□□ 1.15
PCBP1-201ENST00000303577 CDK19Q9BWU1 502 aa22.22■■□□□ 1.15
PCBP1-201ENST00000303577 PRR36Q9H6K5 1346 aa22.2■■□□□ 1.14
PCBP1-201ENST00000303577 C1orf167Q5SNV9 1468 aa22.2■■□□□ 1.14
PCBP1-201ENST00000303577 PIP4K2BP78356 416 aa22.2■■□□□ 1.14
PCBP1-201ENST00000303577 CNGB1Q14028 1251 aaPredicted RBP22.2■■□□□ 1.14
PCBP1-201ENST00000303577 CABP2Q9NPB3 220 aa22.2■■□□□ 1.14
PCBP1-201ENST00000303577 ROBO1Q9Y6N7 1651 aa22.19■■□□□ 1.14
PCBP1-201ENST00000303577 SLAIN2Q9P270 581 aa22.19■■□□□ 1.14
PCBP1-201ENST00000303577 SCAF1Q9H7N4 1312 aaKnown RBP22.19■■□□□ 1.14
PCBP1-201ENST00000303577 ATP7BP35670 1465 aa22.19■■□□□ 1.14
PCBP1-201ENST00000303577 SRPK2P78362 688 aaKnown RBP22.18■■□□□ 1.14
PCBP1-201ENST00000303577 PANK3Q9H999 370 aa22.18■■□□□ 1.14
PCBP1-201ENST00000303577 TOM1O60784 492 aa22.17■■□□□ 1.14
PCBP1-201ENST00000303577 EVC2Q86UK5 1308 aa22.17■■□□□ 1.14
PCBP1-201ENST00000303577 TOPAZ1Q8N9V7 1692 aa22.17■■□□□ 1.14
PCBP1-201ENST00000303577 KTN1Q86UP2 1357 aaKnown RBP22.16■■□□□ 1.14
PCBP1-201ENST00000303577 ITSN1Q15811 1721 aa22.16■■□□□ 1.14
PCBP1-201ENST00000303577 MYOM1P52179 1685 aa22.16■■□□□ 1.14
PCBP1-201ENST00000303577 ORAI2Q96SN7 254 aa22.15■■□□□ 1.14
PCBP1-201ENST00000303577 PER1O15534 1290 aaPredicted RBP22.15■■□□□ 1.14
PCBP1-201ENST00000303577 MRS2Q9HD23 443 aa22.15■■□□□ 1.14
PCBP1-201ENST00000303577 ANKARQ7Z5J8 1434 aa22.14■■□□□ 1.13
PCBP1-201ENST00000303577 NUDT16Q96DE0 195 aaKnown RBP22.14■■□□□ 1.13
PCBP1-201ENST00000303577 CCDC184Q52MB2 194 aa22.13■■□□□ 1.13
PCBP1-201ENST00000303577 RALBP1Q15311 655 aa22.12■■□□□ 1.13
PCBP1-201ENST00000303577 ESCO1Q5FWF5 840 aa22.12■■□□□ 1.13
PCBP1-201ENST00000303577 BRINP3Q76B58 766 aa22.12■■□□□ 1.13
PCBP1-201ENST00000303577 DDX17Q92841 729 aaKnown RBP22.1■■□□□ 1.13
PCBP1-201ENST00000303577 KIF1AQ12756 1690 aa22.1■■□□□ 1.13
PCBP1-201ENST00000303577 PPIP5K1Q6PFW1 1433 aa22.09■■□□□ 1.13
PCBP1-201ENST00000303577 PMFBP1Q8TBY8 1022 aa22.09■■□□□ 1.13
PCBP1-201ENST00000303577 MYBBP1AQ9BQG0 1328 aaKnown RBP22.08■■□□□ 1.12
PCBP1-201ENST00000303577 NHSL1Q5SYE7 1610 aa22.08■■□□□ 1.12
PCBP1-201ENST00000303577 PARD3Q8TEW0 1356 aa22.07■■□□□ 1.12
PCBP1-201ENST00000303577 PHF8Q9UPP1 1060 aa22.07■■□□□ 1.12
PCBP1-201ENST00000303577 KNSTRNQ9Y448 316 aa22.07■■□□□ 1.12
PCBP1-201ENST00000303577 CCDC61Q9Y6R9 512 aa22.06■■□□□ 1.12
PCBP1-201ENST00000303577 ATAD2Q6PL18 1390 aa22.05■■□□□ 1.12
PCBP1-201ENST00000303577 CC2D1BQ5T0F9 858 aaKnown RBP22.05■■□□□ 1.12
PCBP1-201ENST00000303577 XPCQ01831 940 aaPredicted RBP22.04■■□□□ 1.12
PCBP1-201ENST00000303577 CABP1Q9NZU7 370 aa22.04■■□□□ 1.12
PCBP1-201ENST00000303577 PHLPP1O60346 1717 aa22.04■■□□□ 1.12
PCBP1-201ENST00000303577 FOXO3O43524 673 aa22.04■■□□□ 1.12
PCBP1-201ENST00000303577 FBXO41Q8TF61 875 aa22.04■■□□□ 1.12
PCBP1-201ENST00000303577 TMC1Q8TDI8 760 aa22.03■■□□□ 1.12
PCBP1-201ENST00000303577 PUS7Q96PZ0 661 aaKnown RBP22.03■■□□□ 1.12
PCBP1-201ENST00000303577 AHDC1Q5TGY3 1603 aaPredicted RBP22.03■■□□□ 1.12
PCBP1-201ENST00000303577 FAM9BQ8IZU0 186 aa22.02■■□□□ 1.12
PCBP1-201ENST00000303577 SLC12A5Q9H2X9 1139 aa22.01■■□□□ 1.11
PCBP1-201ENST00000303577 BRD4O60885 1362 aaPredicted RBP22.01■■□□□ 1.11
PCBP1-201ENST00000303577 AKAP12Q02952 1782 aa22.01■■□□□ 1.11
PCBP1-201ENST00000303577 ACEP12821 1306 aa22■■□□□ 1.11
PCBP1-201ENST00000303577 NGDNQ8NEJ9 315 aaKnown RBP21.99■■□□□ 1.11
PCBP1-201ENST00000303577 COL16A1Q07092 1604 aaPredicted RBP21.99■■□□□ 1.11
PCBP1-201ENST00000303577 AMER1Q5JTC6 1135 aaPredicted RBP21.99■■□□□ 1.11
PCBP1-201ENST00000303577 NLRP13Q86W25 1043 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms