RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 CENPJQ9HC77 1338 aaPredicted RBP34.62■■■■□ 3.13
HOXC9-201ENST00000303450 NALCNQ8IZF0 1738 aa34.61■■■■□ 3.13
HOXC9-201ENST00000303450 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.61■■■■□ 3.13
HOXC9-201ENST00000303450 ZEB1P37275 1124 aaPredicted RBP34.59■■■■□ 3.13
HOXC9-201ENST00000303450 ATF3P18847 181 aa34.57■■■■□ 3.12
HOXC9-201ENST00000303450 MINK1Q8N4C8 1332 aaPredicted RBP34.57■■■■□ 3.12
HOXC9-201ENST00000303450 USP47Q96K76 1375 aa34.55■■■■□ 3.12
HOXC9-201ENST00000303450 CADPS2Q86UW7 1296 aa34.55■■■■□ 3.12
HOXC9-201ENST00000303450 DCCP43146 1447 aa34.55■■■■□ 3.12
HOXC9-201ENST00000303450 HIRIP3Q9BW71 556 aaPredicted RBP34.54■■■■□ 3.12
HOXC9-201ENST00000303450 QRICH2Q9H0J4 1663 aa34.53■■■■□ 3.12
HOXC9-201ENST00000303450 UBAP1LF5GYI3 381 aa34.52■■■■□ 3.12
HOXC9-201ENST00000303450 TOM1O60784 492 aa34.52■■■■□ 3.12
HOXC9-201ENST00000303450 CDC42BPGQ6DT37 1551 aa34.5■■■■□ 3.11
HOXC9-201ENST00000303450 ST20-MTHFSA0A0A6YYL1 179 aa34.49■■■■□ 3.11
HOXC9-201ENST00000303450 ADGRB2O60241 1585 aa34.48■■■■□ 3.11
HOXC9-201ENST00000303450 EIF4G2P78344 907 aaKnown RBP eCLIP34.45■■■■□ 3.11
HOXC9-201ENST00000303450 WASLO00401 505 aaPredicted RBP34.44■■■■□ 3.1
HOXC9-201ENST00000303450 SLAIN2Q9P270 581 aa34.44■■■■□ 3.1
HOXC9-201ENST00000303450 SBNO2Q9Y2G9 1366 aa34.41■■■■□ 3.1
HOXC9-201ENST00000303450 NUTM2FA1L443 756 aa34.4■■■■□ 3.1
HOXC9-201ENST00000303450 MST1RQ04912 1400 aa34.4■■■■□ 3.1
HOXC9-201ENST00000303450 FMN2Q9NZ56 1722 aa34.39■■■■□ 3.1
HOXC9-201ENST00000303450 PIP4K2BP78356 416 aa34.39■■■■□ 3.1
HOXC9-201ENST00000303450 CDK19Q9BWU1 502 aa34.39■■■■□ 3.1
HOXC9-201ENST00000303450 EVC2Q86UK5 1308 aa34.39■■■■□ 3.1
HOXC9-201ENST00000303450 HSPA5P11021 654 aaKnown RBP34.38■■■■□ 3.09
HOXC9-201ENST00000303450 SCAF1Q9H7N4 1312 aaKnown RBP34.38■■■■□ 3.09
HOXC9-201ENST00000303450 TESK2Q96S53 571 aa34.37■■■■□ 3.09
HOXC9-201ENST00000303450 SLC24A1O60721 1099 aa34.36■■■■□ 3.09
HOXC9-201ENST00000303450 C1orf167Q5SNV9 1468 aa34.35■■■■□ 3.09
HOXC9-201ENST00000303450 SRPK2P78362 688 aaKnown RBP34.34■■■■□ 3.09
HOXC9-201ENST00000303450 TULP4Q9NRJ4 1543 aa34.34■■■■□ 3.09
HOXC9-201ENST00000303450 ANKARQ7Z5J8 1434 aa34.3■■■■□ 3.08
HOXC9-201ENST00000303450 FBXO41Q8TF61 875 aa34.3■■■■□ 3.08
HOXC9-201ENST00000303450 CABP2Q9NPB3 220 aa34.3■■■■□ 3.08
HOXC9-201ENST00000303450 ESCO1Q5FWF5 840 aa34.29■■■■□ 3.08
HOXC9-201ENST00000303450 TMF1P82094 1093 aa34.28■■■■□ 3.08
HOXC9-201ENST00000303450 NUDT16Q96DE0 195 aaKnown RBP34.27■■■■□ 3.08
HOXC9-201ENST00000303450 ORAI2Q96SN7 254 aa34.27■■■■□ 3.08
HOXC9-201ENST00000303450 RGPD8O14715 1765 aaPredicted RBP34.27■■■■□ 3.08
HOXC9-201ENST00000303450 PRR36Q9H6K5 1346 aa34.26■■■■□ 3.08
HOXC9-201ENST00000303450 ROBO1Q9Y6N7 1651 aa34.26■■■■□ 3.07
HOXC9-201ENST00000303450 USP32Q8NFA0 1604 aa34.26■■■■□ 3.07
HOXC9-201ENST00000303450 BRINP3Q76B58 766 aa34.25■■■■□ 3.07
HOXC9-201ENST00000303450 ATP7BP35670 1465 aa34.23■■■■□ 3.07
HOXC9-201ENST00000303450 CCDC61Q9Y6R9 512 aa34.21■■■■□ 3.07
HOXC9-201ENST00000303450 DISP3Q9P2K9 1392 aa34.2■■■■□ 3.07
HOXC9-201ENST00000303450 PHF8Q9UPP1 1060 aa34.19■■■■□ 3.06
HOXC9-201ENST00000303450 ITSN1Q15811 1721 aa34.19■■■■□ 3.06
HOXC9-201ENST00000303450 ATAD2Q6PL18 1390 aa34.18■■■■□ 3.06
HOXC9-201ENST00000303450 CDCA8Q53HL2 280 aa34.18■■■■□ 3.06
HOXC9-201ENST00000303450 PUS7Q96PZ0 661 aaKnown RBP34.17■■■■□ 3.06
HOXC9-201ENST00000303450 PMFBP1Q8TBY8 1022 aa34.15■■■■□ 3.06
HOXC9-201ENST00000303450 KIF1AQ12756 1690 aa34.14■■■■□ 3.06
HOXC9-201ENST00000303450 TOPAZ1Q8N9V7 1692 aa34.14■■■■□ 3.06
HOXC9-201ENST00000303450 PPIP5K1Q6PFW1 1433 aa34.13■■■■□ 3.05
HOXC9-201ENST00000303450 FOXO3O43524 673 aa34.11■■■■□ 3.05
HOXC9-201ENST00000303450 CABP1Q9NZU7 370 aa34.11■■■■□ 3.05
HOXC9-201ENST00000303450 PLEKHG3A1L390 1219 aa34.09■■■■□ 3.05
HOXC9-201ENST00000303450 NGDNQ8NEJ9 315 aaKnown RBP34.09■■■■□ 3.05
HOXC9-201ENST00000303450 DDX17Q92841 729 aaKnown RBP34.09■■■■□ 3.05
HOXC9-201ENST00000303450 NPHP3Q7Z494 1330 aa34.09■■■■□ 3.05
HOXC9-201ENST00000303450 TMC1Q8TDI8 760 aa34.09■■■■□ 3.05
HOXC9-201ENST00000303450 POLR3GLQ9BT43 218 aa34.07■■■■□ 3.04
HOXC9-201ENST00000303450 NHSL1Q5SYE7 1610 aa34.07■■■■□ 3.04
HOXC9-201ENST00000303450 AHDC1Q5TGY3 1603 aaPredicted RBP34.06■■■■□ 3.04
HOXC9-201ENST00000303450 C11orf95C9JLR9 678 aaPredicted RBP34.04■■■■□ 3.04
HOXC9-201ENST00000303450 PSME1Q06323 249 aa34.04■■■■□ 3.04
HOXC9-201ENST00000303450 ACEP12821 1306 aa34.04■■■■□ 3.04
HOXC9-201ENST00000303450 PHLPP1O60346 1717 aa34.04■■■■□ 3.04
HOXC9-201ENST00000303450 HSPA1LP34931 641 aa34.04■■■■□ 3.04
HOXC9-201ENST00000303450 XPCQ01831 940 aaPredicted RBP34.02■■■■□ 3.04
HOXC9-201ENST00000303450 SLC12A5Q9H2X9 1139 aa34.02■■■■□ 3.04
HOXC9-201ENST00000303450 POLR3AO14802 1390 aaPredicted RBP34.02■■■■□ 3.04
HOXC9-201ENST00000303450 NINLQ9Y2I6 1382 aa34.01■■■■□ 3.04
HOXC9-201ENST00000303450 KRT28Q7Z3Y7 464 aa34■■■■□ 3.03
HOXC9-201ENST00000303450 SOS2Q07890 1332 aaPredicted RBP33.99■■■■□ 3.03
HOXC9-201ENST00000303450 PXDNQ92626 1479 aa33.97■■■■□ 3.03
HOXC9-201ENST00000303450 KIF7Q2M1P5 1343 aa33.97■■■■□ 3.03
HOXC9-201ENST00000303450 ILDR1Q86SU0 546 aaPredicted RBP33.96■■■■□ 3.03
HOXC9-201ENST00000303450 TERF2IPQ9NYB0 399 aa33.95■■■■□ 3.03
HOXC9-201ENST00000303450 COL16A1Q07092 1604 aaPredicted RBP33.95■■■■□ 3.02
HOXC9-201ENST00000303450 ZNF692Q9BU19 519 aaPredicted RBP33.94■■■■□ 3.02
HOXC9-201ENST00000303450 HDGFL2Q7Z4V5 671 aaPredicted RBP33.94■■■■□ 3.02
HOXC9-201ENST00000303450 LRRC59Q96AG4 307 aaKnown RBP33.93■■■■□ 3.02
HOXC9-201ENST00000303450 CPSF1Q10570 1443 aaKnown RBP33.91■■■■□ 3.02
HOXC9-201ENST00000303450 MYOM1P52179 1685 aa33.91■■■■□ 3.02
HOXC9-201ENST00000303450 CCDC7Q96M83 1385 aa33.9■■■■□ 3.02
HOXC9-201ENST00000303450 CD163L1Q9NR16 1453 aa33.9■■■■□ 3.02
HOXC9-201ENST00000303450 AKAP12Q02952 1782 aa33.9■■■■□ 3.02
HOXC9-201ENST00000303450 KTN1Q86UP2 1357 aaKnown RBP33.89■■■■□ 3.02
HOXC9-201ENST00000303450 WASHC2AQ641Q2 1341 aa33.89■■■■□ 3.02
HOXC9-201ENST00000303450 USP6P35125 1406 aa33.89■■■■□ 3.02
HOXC9-201ENST00000303450 PAK3O75914 559 aaPredicted RBP33.89■■■■□ 3.02
HOXC9-201ENST00000303450 A0A1W2PP64 1363 aa33.88■■■■□ 3.01
HOXC9-201ENST00000303450 SBNO1A3KN83 1393 aa33.88■■■■□ 3.01
HOXC9-201ENST00000303450 ANKRD36BQ8N2N9 1353 aa33.87■■■■□ 3.01
HOXC9-201ENST00000303450 TRPM3Q9HCF6 1732 aaPredicted RBP33.85■■■■□ 3.01
HOXC9-201ENST00000303450 BRD4O60885 1362 aaPredicted RBP33.85■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms