RNA–Protein interactions for RNA: ENST00000302424.11

TRIM8-201, Transcript of tripartite motif containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM8, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-201ENST00000302424 ARAP3Q8WWN8 1544 aa23.29■■□□□ 1.32
TRIM8-201ENST00000302424 U2AF1L5P0DN76 240 aaPredicted RBP23.28■■□□□ 1.32
TRIM8-201ENST00000302424 RLBP1P12271 317 aa23.28■■□□□ 1.32
TRIM8-201ENST00000302424 U2AF1Q01081 240 aaKnown RBP eCLIP23.28■■□□□ 1.32
TRIM8-201ENST00000302424 MYOM2P54296 1465 aa23.27■■□□□ 1.32
TRIM8-201ENST00000302424 DAXXQ9UER7 740 aaPredicted RBP23.27■■□□□ 1.32
TRIM8-201ENST00000302424 CD109Q6YHK3 1445 aa23.26■■□□□ 1.31
TRIM8-201ENST00000302424 SEC24BO95487 1268 aa23.26■■□□□ 1.31
TRIM8-201ENST00000302424 GGNBP2Q9H3C7 697 aa23.26■■□□□ 1.31
TRIM8-201ENST00000302424 U2SURPO15042 1029 aaKnown RBP23.24■■□□□ 1.31
TRIM8-201ENST00000302424 RUNDC1Q96C34 613 aa23.24■■□□□ 1.31
TRIM8-201ENST00000302424 PPP6R1Q9UPN7 881 aa23.24■■□□□ 1.31
TRIM8-201ENST00000302424 ZNF518AQ6AHZ1 1483 aa23.24■■□□□ 1.31
TRIM8-201ENST00000302424 SRPK2P78362 688 aaKnown RBP23.23■■□□□ 1.31
TRIM8-201ENST00000302424 TSR2Q969E8 191 aaKnown RBP23.23■■□□□ 1.31
TRIM8-201ENST00000302424 FBLN1P23142 703 aa23.23■■□□□ 1.31
TRIM8-201ENST00000302424 IDI1Q13907 227 aa23.23■■□□□ 1.31
TRIM8-201ENST00000302424 POLR3AO14802 1390 aaPredicted RBP23.22■■□□□ 1.31
TRIM8-201ENST00000302424 MINK1Q8N4C8 1332 aaPredicted RBP23.22■■□□□ 1.31
TRIM8-201ENST00000302424 RARSP54136 660 aaKnown RBP23.22■■□□□ 1.31
TRIM8-201ENST00000302424 KIAA1210Q9ULL0 1709 aa23.21■■□□□ 1.31
TRIM8-201ENST00000302424 DDRGK1Q96HY6 314 aa23.21■■□□□ 1.31
TRIM8-201ENST00000302424 RTN4Q9NQC3 1192 aaKnown RBP23.21■■□□□ 1.31
TRIM8-201ENST00000302424 CGNL1Q0VF96 1302 aa23.2■■□□□ 1.31
TRIM8-201ENST00000302424 PCDHB15Q9Y5E8 787 aa23.2■■□□□ 1.3
TRIM8-201ENST00000302424 SLC24A1O60721 1099 aa23.19■■□□□ 1.3
TRIM8-201ENST00000302424 IFT172Q9UG01 1749 aa23.18■■□□□ 1.3
TRIM8-201ENST00000302424 ADGRB3O60242 1522 aa23.18■■□□□ 1.3
TRIM8-201ENST00000302424 NFKBIBQ15653 356 aa23.17■■□□□ 1.3
TRIM8-201ENST00000302424 NRXN1Q9ULB1 1477 aa23.17■■□□□ 1.3
TRIM8-201ENST00000302424 IL27Q8NEV9 243 aa23.17■■□□□ 1.3
TRIM8-201ENST00000302424 QRICH2Q9H0J4 1663 aa23.17■■□□□ 1.3
TRIM8-201ENST00000302424 EVC2Q86UK5 1308 aa23.16■■□□□ 1.3
TRIM8-201ENST00000302424 FRMPD1Q5SYB0 1578 aa23.16■■□□□ 1.3
TRIM8-201ENST00000302424 OSCARQ8IYS5 282 aa23.16■■□□□ 1.3
TRIM8-201ENST00000302424 CFAP53Q96M91 514 aa23.16■■□□□ 1.3
TRIM8-201ENST00000302424 FBXO31Q5XUX0 539 aaPredicted RBP23.15■■□□□ 1.3
TRIM8-201ENST00000302424 PPM1GO15355 546 aaPredicted RBP23.15■■□□□ 1.3
TRIM8-201ENST00000302424 PDE3AQ14432 1141 aa23.14■■□□□ 1.3
TRIM8-201ENST00000302424 POGZQ7Z3K3 1410 aa23.14■■□□□ 1.3
TRIM8-201ENST00000302424 ADGRB1O14514 1584 aa23.14■■□□□ 1.29
TRIM8-201ENST00000302424 VGFO15240 615 aaPredicted RBP23.14■■□□□ 1.29
TRIM8-201ENST00000302424 SBNO2Q9Y2G9 1366 aa23.13■■□□□ 1.29
TRIM8-201ENST00000302424 SHPRHQ149N8 1683 aa23.12■■□□□ 1.29
TRIM8-201ENST00000302424 PRAM1Q96QH2 718 aa23.12■■□□□ 1.29
TRIM8-201ENST00000302424 FRAT2O75474 233 aaPredicted RBP23.1■■□□□ 1.29
TRIM8-201ENST00000302424 POGKQ9P215 609 aa23.1■■□□□ 1.29
TRIM8-201ENST00000302424 PPLO60437 1756 aa23.1■■□□□ 1.29
TRIM8-201ENST00000302424 SIGLEC1Q9BZZ2 1709 aa23.09■■□□□ 1.29
TRIM8-201ENST00000302424 EXOSC9Q06265 439 aaKnown RBP23.09■■□□□ 1.29
TRIM8-201ENST00000302424 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.09■■□□□ 1.29
TRIM8-201ENST00000302424 A0A1W2PP64 1363 aa23.08■■□□□ 1.29
TRIM8-201ENST00000302424 ABCC3O15438 1527 aa23.08■■□□□ 1.28
TRIM8-201ENST00000302424 USP19O94966 1318 aa23.07■■□□□ 1.28
TRIM8-201ENST00000302424 PDZRN3Q9UPQ7 1066 aa23.07■■□□□ 1.28
TRIM8-201ENST00000302424 TULP4Q9NRJ4 1543 aa23.07■■□□□ 1.28
TRIM8-201ENST00000302424 SLKQ9H2G2 1235 aaPredicted RBP23.07■■□□□ 1.28
TRIM8-201ENST00000302424 LMTK2Q8IWU2 1503 aa23.07■■□□□ 1.28
TRIM8-201ENST00000302424 MYO3AQ8NEV4 1616 aa23.06■■□□□ 1.28
TRIM8-201ENST00000302424 SPRYD3Q8NCJ5 442 aa23.06■■□□□ 1.28
TRIM8-201ENST00000302424 GLI2P10070 1586 aa23.05■■□□□ 1.28
TRIM8-201ENST00000302424 WDR63Q8IWG1 891 aa23.05■■□□□ 1.28
TRIM8-201ENST00000302424 FTSJ3Q8IY81 847 aaKnown RBP23.05■■□□□ 1.28
TRIM8-201ENST00000302424 SMC4Q9NTJ3 1288 aa23.05■■□□□ 1.28
TRIM8-201ENST00000302424 YEATS2Q9ULM3 1422 aa23.05■■□□□ 1.28
TRIM8-201ENST00000302424 STAG3Q9UJ98 1225 aa23.04■■□□□ 1.28
TRIM8-201ENST00000302424 RPGRIP1LQ68CZ1 1315 aa23.04■■□□□ 1.28
TRIM8-201ENST00000302424 ANKRD36BQ8N2N9 1353 aa23.04■■□□□ 1.28
TRIM8-201ENST00000302424 FYB1O15117 783 aa23.04■■□□□ 1.28
TRIM8-201ENST00000302424 NEURL4Q96JN8 1562 aa23.04■■□□□ 1.28
TRIM8-201ENST00000302424 SETBP1Q9Y6X0 1596 aa23.04■■□□□ 1.28
TRIM8-201ENST00000302424 MLECQ14165 292 aa23.04■■□□□ 1.28
TRIM8-201ENST00000302424 CABP1Q9NZU7 370 aa23.03■■□□□ 1.28
TRIM8-201ENST00000302424 WAPLQ7Z5K2 1190 aa23.03■■□□□ 1.28
TRIM8-201ENST00000302424 MLH3Q9UHC1 1453 aa23.03■■□□□ 1.28
TRIM8-201ENST00000302424 HECW2Q9P2P5 1572 aa23.02■■□□□ 1.28
TRIM8-201ENST00000302424 NGEFQ8N5V2 710 aa23.02■■□□□ 1.28
TRIM8-201ENST00000302424 MYH16Q9H6N6 1097 aa23.02■■□□□ 1.28
TRIM8-201ENST00000302424 USP35Q9P2H5 1018 aa23.02■■□□□ 1.28
TRIM8-201ENST00000302424 IQSEC2Q5JU85 1478 aa23.01■■□□□ 1.27
TRIM8-201ENST00000302424 TMPOP42166 694 aaKnown RBP23.01■■□□□ 1.27
TRIM8-201ENST00000302424 CYB5RLQ6IPT4 315 aa23.01■■□□□ 1.27
TRIM8-201ENST00000302424 SSH1Q8WYL5 1049 aa23.01■■□□□ 1.27
TRIM8-201ENST00000302424 TRIM35Q9UPQ4 493 aa23.01■■□□□ 1.27
TRIM8-201ENST00000302424 ZC3H13Q5T200 1668 aaKnown RBP23.01■■□□□ 1.27
TRIM8-201ENST00000302424 ITPRIPQ8IWB1 547 aa23■■□□□ 1.27
TRIM8-201ENST00000302424 RIPK4P57078 832 aa23■■□□□ 1.27
TRIM8-201ENST00000302424 CAMSAP1Q5T5Y3 1602 aa23■■□□□ 1.27
TRIM8-201ENST00000302424 MAPK8IP3Q9UPT6 1336 aa22.99■■□□□ 1.27
TRIM8-201ENST00000302424 THUMPD2Q9BTF0 503 aaKnown RBP22.99■■□□□ 1.27
TRIM8-201ENST00000302424 BRPF3Q9ULD4 1205 aa22.99■■□□□ 1.27
TRIM8-201ENST00000302424 DZIP1LQ8IYY4 767 aaKnown RBP22.98■■□□□ 1.27
TRIM8-201ENST00000302424 CDK19Q9BWU1 502 aa22.98■■□□□ 1.27
TRIM8-201ENST00000302424 HMOX1P09601 288 aa22.98■■□□□ 1.27
TRIM8-201ENST00000302424 TRIM27P14373 513 aa22.98■■□□□ 1.27
TRIM8-201ENST00000302424 PLEKHF1Q96S99 279 aa22.98■■□□□ 1.27
TRIM8-201ENST00000302424 ZKSCAN2Q63HK3 967 aa22.97■■□□□ 1.27
TRIM8-201ENST00000302424 PMFBP1Q8TBY8 1022 aa22.97■■□□□ 1.27
TRIM8-201ENST00000302424 NEXMIFQ5QGS0 1516 aa22.97■■□□□ 1.27
TRIM8-201ENST00000302424 GSE1Q14687 1217 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms