RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 NUP155O75694 1391 aa10.08□□□□□ -0.8
ITGB1-201ENST00000302278 ROBO2Q9HCK4 1378 aa10.08□□□□□ -0.8
ITGB1-201ENST00000302278 FOXD1Q16676 465 aa10.08□□□□□ -0.8
ITGB1-201ENST00000302278 C14orf37Q86TY3 774 aa10.08□□□□□ -0.8
ITGB1-201ENST00000302278 RGPD1P0DJD0 1748 aa10.08□□□□□ -0.8
ITGB1-201ENST00000302278 LOC105371045A0A1W2PR82 267 aa10.07□□□□□ -0.8
ITGB1-201ENST00000302278 TRPC5Q9UL62 973 aaPredicted RBP10.07□□□□□ -0.8
ITGB1-201ENST00000302278 APLP2Q06481 763 aa10.07□□□□□ -0.8
ITGB1-201ENST00000302278 RPGRIP1LQ68CZ1 1315 aa10.07□□□□□ -0.8
ITGB1-201ENST00000302278 TRPM3Q9HCF6 1732 aaPredicted RBP10.06□□□□□ -0.8
ITGB1-201ENST00000302278 ADGRB2O60241 1585 aa10.06□□□□□ -0.8
ITGB1-201ENST00000302278 TNS1Q9HBL0 1735 aaKnown RBP10.06□□□□□ -0.8
ITGB1-201ENST00000302278 BLMP54132 1417 aaPredicted RBP10.05□□□□□ -0.8
ITGB1-201ENST00000302278 C8orf37Q96NL8 207 aa10.05□□□□□ -0.8
ITGB1-201ENST00000302278 NUTM2BA6NNL0 878 aaPredicted RBP10.05□□□□□ -0.8
ITGB1-201ENST00000302278 NUTM2EB1AL46 878 aaPredicted RBP10.05□□□□□ -0.8
ITGB1-201ENST00000302278 NUTM2AQ8IVF1 878 aaPredicted RBP10.05□□□□□ -0.8
ITGB1-201ENST00000302278 ALS2Q96Q42 1657 aa10.04□□□□□ -0.8
ITGB1-201ENST00000302278 THSD7AQ9UPZ6 1657 aa10.04□□□□□ -0.8
ITGB1-201ENST00000302278 RALGAPBQ86X10 1494 aa10.04□□□□□ -0.8
ITGB1-201ENST00000302278 RRBP1Q9P2E9 1410 aaKnown RBP10.04□□□□□ -0.8
ITGB1-201ENST00000302278 RGPD8O14715 1765 aaPredicted RBP10.04□□□□□ -0.8
ITGB1-201ENST00000302278 NUTM2DQ5VT03 806 aaPredicted RBP10.03□□□□□ -0.8
ITGB1-201ENST00000302278 USP21Q9UK80 565 aa10.03□□□□□ -0.8
ITGB1-201ENST00000302278 NAIPQ13075 1403 aa10.03□□□□□ -0.8
ITGB1-201ENST00000302278 NRXN1Q9ULB1 1477 aa10.03□□□□□ -0.8
ITGB1-201ENST00000302278 FAM50AQ14320 339 aaKnown RBP10.02□□□□□ -0.81
ITGB1-201ENST00000302278 LRPPRCP42704 1394 aaKnown RBP10.02□□□□□ -0.81
ITGB1-201ENST00000302278 RREB1Q92766 1687 aa10.02□□□□□ -0.81
ITGB1-201ENST00000302278 COL14A1Q05707 1796 aaKnown RBP10.01□□□□□ -0.81
ITGB1-201ENST00000302278 CHGAP10645 457 aaKnown RBP10.01□□□□□ -0.81
ITGB1-201ENST00000302278 NPHP3Q7Z494 1330 aa10.01□□□□□ -0.81
ITGB1-201ENST00000302278 EP400Q96L91 3159 aa10.01□□□□□ -0.81
ITGB1-201ENST00000302278 DISP2A7MBM2 1401 aa10.01□□□□□ -0.81
ITGB1-201ENST00000302278 DDX17Q92841 729 aaKnown RBP10.01□□□□□ -0.81
ITGB1-201ENST00000302278 ZRANB1Q9UGI0 708 aa10.01□□□□□ -0.81
ITGB1-201ENST00000302278 ONECUT3O60422 494 aaPredicted RBP10.01□□□□□ -0.81
ITGB1-201ENST00000302278 CCDC144AA2RUR9 1427 aa10□□□□□ -0.81
ITGB1-201ENST00000302278 SPATA31E1Q6ZUB1 1445 aa10□□□□□ -0.81
ITGB1-201ENST00000302278 DLC1Q96QB1 1528 aa10□□□□□ -0.81
ITGB1-201ENST00000302278 PIK3C2GO75747 1445 aa10□□□□□ -0.81
ITGB1-201ENST00000302278 VGFO15240 615 aaPredicted RBP10□□□□□ -0.81
ITGB1-201ENST00000302278 ABCC11Q96J66 1382 aa9.99□□□□□ -0.81
ITGB1-201ENST00000302278 GJD4Q96KN9 370 aaPredicted RBP9.99□□□□□ -0.81
ITGB1-201ENST00000302278 ORAI2Q96SN7 254 aa9.99□□□□□ -0.81
ITGB1-201ENST00000302278 RGPD3A6NKT7 1758 aaPredicted RBP9.99□□□□□ -0.81
ITGB1-201ENST00000302278 RGPD4Q7Z3J3 1758 aa9.99□□□□□ -0.81
ITGB1-201ENST00000302278 SIRT1Q96EB6 747 aa9.99□□□□□ -0.81
ITGB1-201ENST00000302278 SBNO1A3KN83 1393 aa9.98□□□□□ -0.81
ITGB1-201ENST00000302278 TNS3Q68CZ2 1445 aa9.98□□□□□ -0.81
ITGB1-201ENST00000302278 SPATA31A3Q5VYP0 1347 aa9.97□□□□□ -0.81
ITGB1-201ENST00000302278 ADAMTS2O95450 1211 aa9.96□□□□□ -0.81
ITGB1-201ENST00000302278 UNC5CLQ8IV45 518 aa9.96□□□□□ -0.81
ITGB1-201ENST00000302278 ANKARQ7Z5J8 1434 aa9.96□□□□□ -0.82
ITGB1-201ENST00000302278 ITSN1Q15811 1721 aa9.95□□□□□ -0.82
ITGB1-201ENST00000302278 NUP188Q5SRE5 1749 aa9.95□□□□□ -0.82
ITGB1-201ENST00000302278 PHRF1Q9P1Y6 1649 aaKnown RBP9.95□□□□□ -0.82
ITGB1-201ENST00000302278 ZNF326Q5BKZ1 582 aaKnown RBP9.95□□□□□ -0.82
ITGB1-201ENST00000302278 ANKRD30BQ9BXX2 1392 aa9.95□□□□□ -0.82
ITGB1-201ENST00000302278 VPS72Q15906 364 aa9.95□□□□□ -0.82
ITGB1-201ENST00000302278 TOPAZ1Q8N9V7 1692 aa9.94□□□□□ -0.82
ITGB1-201ENST00000302278 YTHDC2Q9H6S0 1430 aaKnown RBP9.93□□□□□ -0.82
ITGB1-201ENST00000302278 ADGRB1O14514 1584 aa9.93□□□□□ -0.82
ITGB1-201ENST00000302278 ARHGEF10O15013 1369 aa9.92□□□□□ -0.82
ITGB1-201ENST00000302278 WNK3Q9BYP7 1800 aa9.91□□□□□ -0.82
ITGB1-201ENST00000302278 PARP4Q9UKK3 1724 aaKnown RBP9.9□□□□□ -0.82
ITGB1-201ENST00000302278 PLEKHH1Q9ULM0 1364 aa9.9□□□□□ -0.82
ITGB1-201ENST00000302278 LMO7Q8WWI1 1683 aa9.9□□□□□ -0.82
ITGB1-201ENST00000302278 TULP4Q9NRJ4 1543 aa9.9□□□□□ -0.83
ITGB1-201ENST00000302278 PEAK1Q9H792 1746 aa9.89□□□□□ -0.83
ITGB1-201ENST00000302278 ESCO1Q5FWF5 840 aa9.89□□□□□ -0.83
ITGB1-201ENST00000302278 ARHGEF28Q8N1W1 1705 aaKnown RBP9.89□□□□□ -0.83
ITGB1-201ENST00000302278 ADGRF5Q8IZF2 1346 aa9.88□□□□□ -0.83
ITGB1-201ENST00000302278 PARD3Q8TEW0 1356 aa9.88□□□□□ -0.83
ITGB1-201ENST00000302278 CASZ1Q86V15 1759 aa9.88□□□□□ -0.83
ITGB1-201ENST00000302278 SEPT12Q8IYM1 358 aa9.87□□□□□ -0.83
ITGB1-201ENST00000302278 NRKQ7Z2Y5 1582 aa9.86□□□□□ -0.83
ITGB1-201ENST00000302278 FOXO3O43524 673 aa9.86□□□□□ -0.83
ITGB1-201ENST00000302278 SBF2Q86WG5 1849 aa9.86□□□□□ -0.83
ITGB1-201ENST00000302278 KIAA1210Q9ULL0 1709 aa9.86□□□□□ -0.83
ITGB1-201ENST00000302278 ATP7BP35670 1465 aa9.86□□□□□ -0.83
ITGB1-201ENST00000302278 ACIN1Q9UKV3 1341 aaKnown RBP9.86□□□□□ -0.83
ITGB1-201ENST00000302278 HRCP23327 699 aa9.85□□□□□ -0.83
ITGB1-201ENST00000302278 PSME1Q06323 249 aa9.85□□□□□ -0.83
ITGB1-201ENST00000302278 KRT28Q7Z3Y7 464 aa9.85□□□□□ -0.83
ITGB1-201ENST00000302278 KRT27Q7Z3Y8 459 aa9.85□□□□□ -0.83
ITGB1-201ENST00000302278 EIF3AQ14152 1382 aaKnown RBP9.85□□□□□ -0.83
ITGB1-201ENST00000302278 C14orf93Q9H972 538 aaKnown RBP9.85□□□□□ -0.83
ITGB1-201ENST00000302278 DEFB132Q7Z7B7 95 aa9.83□□□□□ -0.84
ITGB1-201ENST00000302278 SPATA31A5Q5VU36 1347 aa9.83□□□□□ -0.84
ITGB1-201ENST00000302278 SPATA31A7Q8IWB4 1347 aa9.83□□□□□ -0.84
ITGB1-201ENST00000302278 WAPLQ7Z5K2 1190 aa9.83□□□□□ -0.84
ITGB1-201ENST00000302278 PHF8Q9UPP1 1060 aa9.83□□□□□ -0.84
ITGB1-201ENST00000302278 COL24A1Q17RW2 1714 aa9.82□□□□□ -0.84
ITGB1-201ENST00000302278 BAG6P46379 1132 aa9.82□□□□□ -0.84
ITGB1-201ENST00000302278 SF3B2Q13435 895 aaKnown RBP9.82□□□□□ -0.84
ITGB1-201ENST00000302278 DHX57Q6P158 1386 aaKnown RBP9.81□□□□□ -0.84
ITGB1-201ENST00000302278 FAM83GA6ND36 823 aa9.81□□□□□ -0.84
ITGB1-201ENST00000302278 LRRC37A3O60309 1634 aa9.81□□□□□ -0.84
ITGB1-201ENST00000302278 XPCQ01831 940 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms