RNA–Protein interactions for RNA: ENST00000299299.3

PCBD1-201, Transcript of pterin-4 alpha-carbinolamine dehydratase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBD1, Length 1,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBD1-201ENST00000299299 YTHDC2Q9H6S0 1430 aaKnown RBP19.59■□□□□ 0.73
PCBD1-201ENST00000299299 TMEM132EQ6IEE7 984 aa19.58■□□□□ 0.72
PCBD1-201ENST00000299299 STK26Q9P289 416 aa19.58■□□□□ 0.72
PCBD1-201ENST00000299299 UPF1Q92900 1129 aaKnown RBP eCLIP19.57■□□□□ 0.72
PCBD1-201ENST00000299299 CDC42BPGQ6DT37 1551 aa19.57■□□□□ 0.72
PCBD1-201ENST00000299299 ABCC11Q96J66 1382 aa19.57■□□□□ 0.72
PCBD1-201ENST00000299299 NUTM2BA6NNL0 878 aaPredicted RBP19.56■□□□□ 0.72
PCBD1-201ENST00000299299 NUTM2EB1AL46 878 aaPredicted RBP19.56■□□□□ 0.72
PCBD1-201ENST00000299299 RXRBP28702 533 aa19.56■□□□□ 0.72
PCBD1-201ENST00000299299 NUTM2AQ8IVF1 878 aaPredicted RBP19.56■□□□□ 0.72
PCBD1-201ENST00000299299 PLEKHH1Q9ULM0 1364 aa19.56■□□□□ 0.72
PCBD1-201ENST00000299299 C1orf167Q5SNV9 1468 aa19.55■□□□□ 0.72
PCBD1-201ENST00000299299 CFAP70Q5T0N1 1121 aa19.55■□□□□ 0.72
PCBD1-201ENST00000299299 C14orf93Q9H972 538 aaKnown RBP19.55■□□□□ 0.72
PCBD1-201ENST00000299299 CDK12Q9NYV4 1490 aaPredicted RBP19.54■□□□□ 0.72
PCBD1-201ENST00000299299 ADGRB1O14514 1584 aa19.53■□□□□ 0.72
PCBD1-201ENST00000299299 NEUROD1Q13562 356 aa19.53■□□□□ 0.72
PCBD1-201ENST00000299299 NHSL1Q5SYE7 1610 aa19.53■□□□□ 0.72
PCBD1-201ENST00000299299 WAPLQ7Z5K2 1190 aa19.52■□□□□ 0.72
PCBD1-201ENST00000299299 DCAF11Q8TEB1 546 aa19.52■□□□□ 0.72
PCBD1-201ENST00000299299 AFF2P51816 1311 aa19.51■□□□□ 0.71
PCBD1-201ENST00000299299 KDM2AQ9Y2K7 1162 aa19.5■□□□□ 0.71
PCBD1-201ENST00000299299 DLC1Q96QB1 1528 aa19.48■□□□□ 0.71
PCBD1-201ENST00000299299 DDX17Q92841 729 aaKnown RBP19.48■□□□□ 0.71
PCBD1-201ENST00000299299 LRRC59Q96AG4 307 aaKnown RBP19.47■□□□□ 0.71
PCBD1-201ENST00000299299 ORAI2Q96SN7 254 aa19.46■□□□□ 0.71
PCBD1-201ENST00000299299 STAC3Q96MF2 364 aa19.44■□□□□ 0.7
PCBD1-201ENST00000299299 C8orf37Q96NL8 207 aa19.44■□□□□ 0.7
PCBD1-201ENST00000299299 PRAM1Q96QH2 718 aa19.44■□□□□ 0.7
PCBD1-201ENST00000299299 TONSLQ96HA7 1378 aa19.44■□□□□ 0.7
PCBD1-201ENST00000299299 SIRT1Q96EB6 747 aa19.43■□□□□ 0.7
PCBD1-201ENST00000299299 NUTM2FA1L443 756 aa19.42■□□□□ 0.7
PCBD1-201ENST00000299299 SAFB2Q14151 953 aaKnown RBP eCLIP19.42■□□□□ 0.7
PCBD1-201ENST00000299299 L3MBTL2Q969R5 705 aa19.42■□□□□ 0.7
PCBD1-201ENST00000299299 PNPLA6Q8IY17 1366 aa19.42■□□□□ 0.7
PCBD1-201ENST00000299299 FMN2Q9NZ56 1722 aa19.42■□□□□ 0.7
PCBD1-201ENST00000299299 RGS12O14924 1447 aa19.42■□□□□ 0.7
PCBD1-201ENST00000299299 RBM6P78332 1123 aaKnown RBP19.41■□□□□ 0.7
PCBD1-201ENST00000299299 TIMELESSQ9UNS1 1208 aa19.41■□□□□ 0.7
PCBD1-201ENST00000299299 ADGRB2O60241 1585 aa19.4■□□□□ 0.7
PCBD1-201ENST00000299299 ESCO1Q5FWF5 840 aa19.4■□□□□ 0.7
PCBD1-201ENST00000299299 QTRT2Q9H974 415 aaKnown RBP19.4■□□□□ 0.7
PCBD1-201ENST00000299299 TRAK1Q9UPV9 953 aa19.4■□□□□ 0.7
PCBD1-201ENST00000299299 POGKQ9P215 609 aa19.39■□□□□ 0.69
PCBD1-201ENST00000299299 SOS2Q07890 1332 aaPredicted RBP19.39■□□□□ 0.69
PCBD1-201ENST00000299299 PXDNQ92626 1479 aa19.38■□□□□ 0.69
PCBD1-201ENST00000299299 NPHP3Q7Z494 1330 aa19.37■□□□□ 0.69
PCBD1-201ENST00000299299 ADAMTS2O95450 1211 aa19.36■□□□□ 0.69
PCBD1-201ENST00000299299 NGLY1Q96IV0 654 aa19.36■□□□□ 0.69
PCBD1-201ENST00000299299 ARHGEF28Q8N1W1 1705 aaKnown RBP19.35■□□□□ 0.69
PCBD1-201ENST00000299299 KIAA1210Q9ULL0 1709 aa19.35■□□□□ 0.69
PCBD1-201ENST00000299299 KIF1AQ12756 1690 aa19.35■□□□□ 0.69
PCBD1-201ENST00000299299 HIRIP3Q9BW71 556 aaPredicted RBP19.34■□□□□ 0.69
PCBD1-201ENST00000299299 TRPM1Q7Z4N2 1603 aa19.33■□□□□ 0.69
PCBD1-201ENST00000299299 FOXO3O43524 673 aa19.33■□□□□ 0.68
PCBD1-201ENST00000299299 XPCQ01831 940 aaPredicted RBP19.33■□□□□ 0.68
PCBD1-201ENST00000299299 ANKARQ7Z5J8 1434 aa19.33■□□□□ 0.68
PCBD1-201ENST00000299299 ATAD2Q6PL18 1390 aa19.32■□□□□ 0.68
PCBD1-201ENST00000299299 MINK1Q8N4C8 1332 aaPredicted RBP19.32■□□□□ 0.68
PCBD1-201ENST00000299299 USP32Q8NFA0 1604 aa19.32■□□□□ 0.68
PCBD1-201ENST00000299299 TULP4Q9NRJ4 1543 aa19.31■□□□□ 0.68
PCBD1-201ENST00000299299 USP21Q9UK80 565 aa19.3■□□□□ 0.68
PCBD1-201ENST00000299299 EIF3AQ14152 1382 aaKnown RBP19.3■□□□□ 0.68
PCBD1-201ENST00000299299 COL22A1Q8NFW1 1626 aaPredicted RBP19.29■□□□□ 0.68
PCBD1-201ENST00000299299 NBPF1Q3BBV0 1214 aa19.29■□□□□ 0.68
PCBD1-201ENST00000299299 NBPF8Q3BBV2 869 aa19.28■□□□□ 0.68
PCBD1-201ENST00000299299 TRPC5Q9UL62 973 aaPredicted RBP19.28■□□□□ 0.68
PCBD1-201ENST00000299299 PHF8Q9UPP1 1060 aa19.28■□□□□ 0.68
PCBD1-201ENST00000299299 PRR36Q9H6K5 1346 aa19.26■□□□□ 0.67
PCBD1-201ENST00000299299 ZEB1P37275 1124 aaPredicted RBP19.26■□□□□ 0.67
PCBD1-201ENST00000299299 ATP7BP35670 1465 aa19.26■□□□□ 0.67
PCBD1-201ENST00000299299 WASLO00401 505 aaPredicted RBP19.25■□□□□ 0.67
PCBD1-201ENST00000299299 TNS3Q68CZ2 1445 aa19.25■□□□□ 0.67
PCBD1-201ENST00000299299 RALGAPBQ86X10 1494 aa19.23■□□□□ 0.67
PCBD1-201ENST00000299299 MARF1Q9Y4F3 1742 aaKnown RBP19.23■□□□□ 0.67
PCBD1-201ENST00000299299 ATRNO75882 1429 aa19.23■□□□□ 0.67
PCBD1-201ENST00000299299 SPATA31A3Q5VYP0 1347 aa19.23■□□□□ 0.67
PCBD1-201ENST00000299299 RGPD8O14715 1765 aaPredicted RBP19.22■□□□□ 0.67
PCBD1-201ENST00000299299 FNBP4Q8N3X1 1017 aaPredicted RBP19.22■□□□□ 0.67
PCBD1-201ENST00000299299 PMFBP1Q8TBY8 1022 aa19.22■□□□□ 0.67
PCBD1-201ENST00000299299 ROCK2O75116 1388 aaKnown RBP19.21■□□□□ 0.67
PCBD1-201ENST00000299299 KRT28Q7Z3Y7 464 aa19.21■□□□□ 0.67
PCBD1-201ENST00000299299 ZRANB1Q9UGI0 708 aa19.2■□□□□ 0.66
PCBD1-201ENST00000299299 CENPJQ9HC77 1338 aaPredicted RBP19.2■□□□□ 0.66
PCBD1-201ENST00000299299 SBNO1A3KN83 1393 aa19.19■□□□□ 0.66
PCBD1-201ENST00000299299 PSME1Q06323 249 aa19.17■□□□□ 0.66
PCBD1-201ENST00000299299 TOPAZ1Q8N9V7 1692 aa19.17■□□□□ 0.66
PCBD1-201ENST00000299299 QRICH2Q9H0J4 1663 aa19.17■□□□□ 0.66
PCBD1-201ENST00000299299 ARHGEF10O15013 1369 aa19.17■□□□□ 0.66
PCBD1-201ENST00000299299 CCDC125Q86Z20 511 aa19.16■□□□□ 0.66
PCBD1-201ENST00000299299 CDK19Q9BWU1 502 aa19.16■□□□□ 0.66
PCBD1-201ENST00000299299 ITSN1Q15811 1721 aa19.16■□□□□ 0.66
PCBD1-201ENST00000299299 TRPM3Q9HCF6 1732 aaPredicted RBP19.16■□□□□ 0.66
PCBD1-201ENST00000299299 GPRASP1Q5JY77 1395 aa19.16■□□□□ 0.66
PCBD1-201ENST00000299299 NUDT16Q96DE0 195 aaKnown RBP19.15■□□□□ 0.66
PCBD1-201ENST00000299299 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.14■□□□□ 0.66
PCBD1-201ENST00000299299 BCL9LQ86UU0 1499 aa19.14■□□□□ 0.65
PCBD1-201ENST00000299299 LMOD2Q6P5Q4 547 aa19.13■□□□□ 0.65
PCBD1-201ENST00000299299 NGDNQ8NEJ9 315 aaKnown RBP19.13■□□□□ 0.65
PCBD1-201ENST00000299299 ABCA3Q99758 1704 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms