RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 PRPF40AO75400 957 aaKnown RBP18.77■□□□□ 0.6
FNDC1-201ENST00000297267 RSPH6AQ9H0K4 717 aa18.77■□□□□ 0.6
FNDC1-201ENST00000297267 TSR1Q2NL82 804 aaKnown RBP18.77■□□□□ 0.59
FNDC1-201ENST00000297267 NEXNQ0ZGT2 675 aa18.77■□□□□ 0.59
FNDC1-201ENST00000297267 BRPF1P55201 1214 aaPredicted RBP18.76■□□□□ 0.59
FNDC1-201ENST00000297267 RRP12Q5JTH9 1297 aaKnown RBP18.76■□□□□ 0.59
FNDC1-201ENST00000297267 PDZRN3Q9UPQ7 1066 aa18.76■□□□□ 0.59
FNDC1-201ENST00000297267 MAPK8IP2Q13387 824 aaPredicted RBP18.76■□□□□ 0.59
FNDC1-201ENST00000297267 EXOSC9Q06265 439 aaKnown RBP18.75■□□□□ 0.59
FNDC1-201ENST00000297267 MIS18AQ9NYP9 233 aa18.75■□□□□ 0.59
FNDC1-201ENST00000297267 TCEAL9Q9UHQ7 104 aa18.75■□□□□ 0.59
FNDC1-201ENST00000297267 SASS6Q6UVJ0 657 aa18.75■□□□□ 0.59
FNDC1-201ENST00000297267 XPCQ01831 940 aaPredicted RBP18.74■□□□□ 0.59
FNDC1-201ENST00000297267 CHMP5Q9NZZ3 219 aa18.74■□□□□ 0.59
FNDC1-201ENST00000297267 INTS3Q68E01 1043 aaKnown RBP18.73■□□□□ 0.59
FNDC1-201ENST00000297267 PIBF1Q8WXW3 757 aa18.73■□□□□ 0.59
FNDC1-201ENST00000297267 CFAP70Q5T0N1 1121 aa18.73■□□□□ 0.59
FNDC1-201ENST00000297267 FANCIQ9NVI1 1328 aa18.73■□□□□ 0.59
FNDC1-201ENST00000297267 MYL6BP14649 208 aa18.73■□□□□ 0.59
FNDC1-201ENST00000297267 ZKSCAN1P17029 563 aaPredicted RBP18.73■□□□□ 0.59
FNDC1-201ENST00000297267 NLRP2Q9NX02 1062 aa18.72■□□□□ 0.59
FNDC1-201ENST00000297267 CCDC85AQ96PX6 553 aaPredicted RBP18.71■□□□□ 0.59
FNDC1-201ENST00000297267 STRN4Q9NRL3 753 aa18.71■□□□□ 0.59
FNDC1-201ENST00000297267 CNTLNQ9NXG0 1405 aa18.71■□□□□ 0.59
FNDC1-201ENST00000297267 SKOR2Q2VWA4 1001 aaPredicted RBP18.71■□□□□ 0.58
FNDC1-201ENST00000297267 VGFO15240 615 aaPredicted RBP18.7■□□□□ 0.58
FNDC1-201ENST00000297267 REC8O95072 547 aa18.7■□□□□ 0.58
FNDC1-201ENST00000297267 NASPP49321 788 aaPredicted RBP18.7■□□□□ 0.58
FNDC1-201ENST00000297267 DDX54Q8TDD1 881 aaKnown RBP18.7■□□□□ 0.58
FNDC1-201ENST00000297267 TRAK2O60296 914 aa18.7■□□□□ 0.58
FNDC1-201ENST00000297267 FAM43AQ8N2R8 423 aa18.69■□□□□ 0.58
FNDC1-201ENST00000297267 RBM42Q9BTD8 480 aaKnown RBP18.69■□□□□ 0.58
FNDC1-201ENST00000297267 CCDC34Q96HJ3 373 aa18.69■□□□□ 0.58
FNDC1-201ENST00000297267 TPM2P07951 284 aa18.69■□□□□ 0.58
FNDC1-201ENST00000297267 FSD1Q9BTV5 496 aa18.69■□□□□ 0.58
FNDC1-201ENST00000297267 CTDP1Q9Y5B0 961 aaPredicted RBP18.69■□□□□ 0.58
FNDC1-201ENST00000297267 FIBPO43427 364 aa18.69■□□□□ 0.58
FNDC1-201ENST00000297267 FAM177A1Q8N128 213 aaPredicted RBP18.69■□□□□ 0.58
FNDC1-201ENST00000297267 LARP6Q9BRS8 491 aaKnown RBP18.69■□□□□ 0.58
FNDC1-201ENST00000297267 RRS1Q15050 365 aaKnown RBP18.68■□□□□ 0.58
FNDC1-201ENST00000297267 TXNDC2Q86VQ3 553 aa18.68■□□□□ 0.58
FNDC1-201ENST00000297267 TCP11L2Q8N4U5 519 aa18.68■□□□□ 0.58
FNDC1-201ENST00000297267 SMC2O95347 1197 aa18.68■□□□□ 0.58
FNDC1-201ENST00000297267 UBTFL1P0CB47 393 aaPredicted RBP18.68■□□□□ 0.58
FNDC1-201ENST00000297267 PRKAR2BP31323 418 aa18.68■□□□□ 0.58
FNDC1-201ENST00000297267 FANCD2Q9BXW9 1451 aa18.68■□□□□ 0.58
FNDC1-201ENST00000297267 RUFY2Q8WXA3 655 aa18.68■□□□□ 0.58
FNDC1-201ENST00000297267 NOL10Q9BSC4 688 aaKnown RBP18.67■□□□□ 0.58
FNDC1-201ENST00000297267 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
FNDC1-201ENST00000297267 SURF6O75683 361 aaKnown RBP18.67■□□□□ 0.58
FNDC1-201ENST00000297267 PPP2R1AP30153 589 aa18.67■□□□□ 0.58
FNDC1-201ENST00000297267 NEK4P51957 841 aa18.66■□□□□ 0.58
FNDC1-201ENST00000297267 TRDNQ13061 729 aa18.66■□□□□ 0.58
FNDC1-201ENST00000297267 AQRO60306 1485 aaKnown RBP eCLIP18.66■□□□□ 0.58
FNDC1-201ENST00000297267 ERICH2A1L162 156 aa18.66■□□□□ 0.58
FNDC1-201ENST00000297267 SLC12A5Q9H2X9 1139 aa18.66■□□□□ 0.58
FNDC1-201ENST00000297267 FAM69CQ0P6D2 419 aa18.66■□□□□ 0.58
FNDC1-201ENST00000297267 PPP1R1BQ9UD71 204 aaPredicted RBP18.66■□□□□ 0.58
FNDC1-201ENST00000297267 KIF21BO75037 1637 aa18.66■□□□□ 0.58
FNDC1-201ENST00000297267 ESCO1Q5FWF5 840 aa18.65■□□□□ 0.58
FNDC1-201ENST00000297267 KIF3AQ9Y496 699 aa18.65■□□□□ 0.58
FNDC1-201ENST00000297267 TPM1P09493 284 aa18.65■□□□□ 0.58
FNDC1-201ENST00000297267 ABTB2Q8N961 1025 aa18.65■□□□□ 0.58
FNDC1-201ENST00000297267 AFAP1Q8N556 730 aa18.65■□□□□ 0.58
FNDC1-201ENST00000297267 RBM33Q96EV2 1170 aaKnown RBP18.65■□□□□ 0.58
FNDC1-201ENST00000297267 PTPRGP23470 1445 aa18.65■□□□□ 0.58
FNDC1-201ENST00000297267 NBPF8Q3BBV2 869 aa18.65■□□□□ 0.58
FNDC1-201ENST00000297267 NLRP6P59044 892 aa18.64■□□□□ 0.58
FNDC1-201ENST00000297267 PRAM1Q96QH2 718 aa18.64■□□□□ 0.57
FNDC1-201ENST00000297267 ATP6V1DQ9Y5K8 247 aa18.64■□□□□ 0.57
FNDC1-201ENST00000297267 SMARCA5O60264 1052 aaPredicted RBP18.64■□□□□ 0.57
FNDC1-201ENST00000297267 CDC45O75419 566 aa18.63■□□□□ 0.57
FNDC1-201ENST00000297267 IKQ13123 557 aaPredicted RBP18.63■□□□□ 0.57
FNDC1-201ENST00000297267 ATP2B2Q01814 1243 aa18.63■□□□□ 0.57
FNDC1-201ENST00000297267 THUMPD2Q9BTF0 503 aaKnown RBP18.63■□□□□ 0.57
FNDC1-201ENST00000297267 TMX1Q9H3N1 280 aa18.63■□□□□ 0.57
FNDC1-201ENST00000297267 CADPSQ9ULU8 1353 aa18.62■□□□□ 0.57
FNDC1-201ENST00000297267 FGD5Q6ZNL6 1462 aa18.62■□□□□ 0.57
FNDC1-201ENST00000297267 API5Q9BZZ5 524 aaKnown RBP18.62■□□□□ 0.57
FNDC1-201ENST00000297267 NUTM2BA6NNL0 878 aaPredicted RBP18.61■□□□□ 0.57
FNDC1-201ENST00000297267 NUTM2EB1AL46 878 aaPredicted RBP18.61■□□□□ 0.57
FNDC1-201ENST00000297267 ZFYVE27Q5T4F4 411 aa18.61■□□□□ 0.57
FNDC1-201ENST00000297267 NUTM2AQ8IVF1 878 aaPredicted RBP18.61■□□□□ 0.57
FNDC1-201ENST00000297267 AMOTL1Q8IY63 956 aa18.61■□□□□ 0.57
FNDC1-201ENST00000297267 SLC4A2P04920 1241 aa18.61■□□□□ 0.57
FNDC1-201ENST00000297267 ZBTB9Q96C00 473 aa18.61■□□□□ 0.57
FNDC1-201ENST00000297267 ARHGAP5Q13017 1502 aa18.61■□□□□ 0.57
FNDC1-201ENST00000297267 DCTN1Q14203 1278 aa18.6■□□□□ 0.57
FNDC1-201ENST00000297267 TRIM5Q9C035 493 aa18.6■□□□□ 0.57
FNDC1-201ENST00000297267 DDX58O95786 925 aaKnown RBP18.6■□□□□ 0.57
FNDC1-201ENST00000297267 FGD6Q6ZV73 1430 aa18.6■□□□□ 0.57
FNDC1-201ENST00000297267 PHF23Q9BUL5 403 aaPredicted RBP18.6■□□□□ 0.57
FNDC1-201ENST00000297267 C20orf194Q5TEA3 1177 aa18.6■□□□□ 0.57
FNDC1-201ENST00000297267 SETQ01105 290 aaPredicted RBP18.59■□□□□ 0.57
FNDC1-201ENST00000297267 WDR97A6NE52 1622 aa18.59■□□□□ 0.57
FNDC1-201ENST00000297267 HDAC5Q9UQL6 1122 aa18.59■□□□□ 0.57
FNDC1-201ENST00000297267 PPFIA3O75145 1194 aa18.59■□□□□ 0.57
FNDC1-201ENST00000297267 GNAI1P63096 354 aa18.59■□□□□ 0.57
FNDC1-201ENST00000297267 UACAQ9BZF9 1416 aa18.59■□□□□ 0.57
FNDC1-201ENST00000297267 CNTROBQ8N137 903 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms