RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 FOXD1Q16676 465 aa24■■□□□ 1.43
TMEM41A-201ENST00000296254 IFT172Q9UG01 1749 aa23.99■■□□□ 1.43
TMEM41A-201ENST00000296254 QTRT2Q9H974 415 aaKnown RBP23.99■■□□□ 1.43
TMEM41A-201ENST00000296254 ADGRF5Q8IZF2 1346 aa23.98■■□□□ 1.43
TMEM41A-201ENST00000296254 MYOM2P54296 1465 aa23.97■■□□□ 1.43
TMEM41A-201ENST00000296254 NGLY1Q96IV0 654 aa23.97■■□□□ 1.43
TMEM41A-201ENST00000296254 PXDNQ92626 1479 aa23.96■■□□□ 1.43
TMEM41A-201ENST00000296254 ANKRD30BQ9BXX2 1392 aa23.96■■□□□ 1.43
TMEM41A-201ENST00000296254 KNDC1Q76NI1 1749 aa23.96■■□□□ 1.43
TMEM41A-201ENST00000296254 NPHP3Q7Z494 1330 aa23.95■■□□□ 1.42
TMEM41A-201ENST00000296254 PIK3C2GO75747 1445 aa23.94■■□□□ 1.42
TMEM41A-201ENST00000296254 LRPPRCP42704 1394 aaKnown RBP23.94■■□□□ 1.42
TMEM41A-201ENST00000296254 ESCO1Q5FWF5 840 aa23.92■■□□□ 1.42
TMEM41A-201ENST00000296254 FNBP4Q8N3X1 1017 aaPredicted RBP23.91■■□□□ 1.42
TMEM41A-201ENST00000296254 USP21Q9UK80 565 aa23.91■■□□□ 1.42
TMEM41A-201ENST00000296254 EP400Q96L91 3159 aa23.91■■□□□ 1.42
TMEM41A-201ENST00000296254 SRCAPQ6ZRS2 3230 aa23.91■■□□□ 1.42
TMEM41A-201ENST00000296254 ABCC11Q96J66 1382 aa23.91■■□□□ 1.42
TMEM41A-201ENST00000296254 RGL3Q3MIN7 710 aa23.9■■□□□ 1.42
TMEM41A-201ENST00000296254 MPHOSPH9Q99550 1183 aa23.9■■□□□ 1.42
TMEM41A-201ENST00000296254 ATRNO75882 1429 aa23.9■■□□□ 1.42
TMEM41A-201ENST00000296254 STK26Q9P289 416 aa23.89■■□□□ 1.41
TMEM41A-201ENST00000296254 TRPC5Q9UL62 973 aaPredicted RBP23.89■■□□□ 1.41
TMEM41A-201ENST00000296254 PLEKHH1Q9ULM0 1364 aa23.89■■□□□ 1.41
TMEM41A-201ENST00000296254 WAPLQ7Z5K2 1190 aa23.88■■□□□ 1.41
TMEM41A-201ENST00000296254 FMN2Q9NZ56 1722 aa23.87■■□□□ 1.41
TMEM41A-201ENST00000296254 YTHDC2Q9H6S0 1430 aaKnown RBP23.86■■□□□ 1.41
TMEM41A-201ENST00000296254 FOXO3O43524 673 aa23.86■■□□□ 1.41
TMEM41A-201ENST00000296254 ATAD2Q6PL18 1390 aa23.86■■□□□ 1.41
TMEM41A-201ENST00000296254 MARF1Q9Y4F3 1742 aaKnown RBP23.85■■□□□ 1.41
TMEM41A-201ENST00000296254 XPCQ01831 940 aaPredicted RBP23.85■■□□□ 1.41
TMEM41A-201ENST00000296254 TMEM132EQ6IEE7 984 aa23.85■■□□□ 1.41
TMEM41A-201ENST00000296254 KIF1AQ12756 1690 aa23.85■■□□□ 1.41
TMEM41A-201ENST00000296254 BCL9LQ86UU0 1499 aa23.83■■□□□ 1.41
TMEM41A-201ENST00000296254 NRXN1Q9ULB1 1477 aa23.83■■□□□ 1.41
TMEM41A-201ENST00000296254 NUTM2FA1L443 756 aa23.83■■□□□ 1.41
TMEM41A-201ENST00000296254 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.79■■□□□ 1.4
TMEM41A-201ENST00000296254 SIRT1Q96EB6 747 aa23.77■■□□□ 1.4
TMEM41A-201ENST00000296254 SPATA31A3Q5VYP0 1347 aa23.77■■□□□ 1.4
TMEM41A-201ENST00000296254 ACIN1Q9UKV3 1341 aaKnown RBP23.77■■□□□ 1.4
TMEM41A-201ENST00000296254 C14orf93Q9H972 538 aaKnown RBP23.76■■□□□ 1.39
TMEM41A-201ENST00000296254 USP32Q8NFA0 1604 aa23.76■■□□□ 1.39
TMEM41A-201ENST00000296254 SLIT2O94813 1529 aa23.74■■□□□ 1.39
TMEM41A-201ENST00000296254 TNS3Q68CZ2 1445 aa23.73■■□□□ 1.39
TMEM41A-201ENST00000296254 GJD4Q96KN9 370 aaPredicted RBP23.72■■□□□ 1.39
TMEM41A-201ENST00000296254 DHX57Q6P158 1386 aaKnown RBP23.72■■□□□ 1.39
TMEM41A-201ENST00000296254 GLI3P10071 1580 aa23.71■■□□□ 1.39
TMEM41A-201ENST00000296254 DLC1Q96QB1 1528 aa23.71■■□□□ 1.39
TMEM41A-201ENST00000296254 CFAP70Q5T0N1 1121 aa23.71■■□□□ 1.39
TMEM41A-201ENST00000296254 RALGAPBQ86X10 1494 aa23.7■■□□□ 1.38
TMEM41A-201ENST00000296254 KRT28Q7Z3Y7 464 aa23.7■■□□□ 1.38
TMEM41A-201ENST00000296254 RGPD8O14715 1765 aaPredicted RBP23.7■■□□□ 1.38
TMEM41A-201ENST00000296254 ADGRB2O60241 1585 aa23.69■■□□□ 1.38
TMEM41A-201ENST00000296254 UNC5CLQ8IV45 518 aa23.69■■□□□ 1.38
TMEM41A-201ENST00000296254 PHF8Q9UPP1 1060 aa23.69■■□□□ 1.38
TMEM41A-201ENST00000296254 PRAM1Q96QH2 718 aa23.68■■□□□ 1.38
TMEM41A-201ENST00000296254 ADGRB1O14514 1584 aa23.68■■□□□ 1.38
TMEM41A-201ENST00000296254 ABCA3Q99758 1704 aa23.67■■□□□ 1.38
TMEM41A-201ENST00000296254 ANKARQ7Z5J8 1434 aa23.67■■□□□ 1.38
TMEM41A-201ENST00000296254 SBNO1A3KN83 1393 aa23.66■■□□□ 1.38
TMEM41A-201ENST00000296254 RAB3GAP2Q9H2M9 1393 aa23.66■■□□□ 1.38
TMEM41A-201ENST00000296254 PLCH1Q4KWH8 1693 aa23.64■■□□□ 1.38
TMEM41A-201ENST00000296254 PSME1Q06323 249 aa23.64■■□□□ 1.37
TMEM41A-201ENST00000296254 SAFB2Q14151 953 aaKnown RBP eCLIP23.64■■□□□ 1.37
TMEM41A-201ENST00000296254 ARHGEF10O15013 1369 aa23.64■■□□□ 1.37
TMEM41A-201ENST00000296254 CCDC125Q86Z20 511 aa23.63■■□□□ 1.37
TMEM41A-201ENST00000296254 NWD2Q9ULI1 1742 aa23.63■■□□□ 1.37
TMEM41A-201ENST00000296254 HAP1P54257 671 aaPredicted RBP23.61■■□□□ 1.37
TMEM41A-201ENST00000296254 CABLES1Q8TDN4 633 aa23.6■■□□□ 1.37
TMEM41A-201ENST00000296254 POGKQ9P215 609 aa23.6■■□□□ 1.37
TMEM41A-201ENST00000296254 TRPM3Q9HCF6 1732 aaPredicted RBP23.59■■□□□ 1.37
TMEM41A-201ENST00000296254 BLMP54132 1417 aaPredicted RBP23.59■■□□□ 1.37
TMEM41A-201ENST00000296254 VPS72Q15906 364 aa23.58■■□□□ 1.37
TMEM41A-201ENST00000296254 ZRANB1Q9UGI0 708 aa23.58■■□□□ 1.37
TMEM41A-201ENST00000296254 BRWD3Q6RI45 1802 aa23.57■■□□□ 1.36
TMEM41A-201ENST00000296254 TULP4Q9NRJ4 1543 aa23.57■■□□□ 1.36
TMEM41A-201ENST00000296254 EIF3AQ14152 1382 aaKnown RBP23.56■■□□□ 1.36
TMEM41A-201ENST00000296254 PMFBP1Q8TBY8 1022 aa23.56■■□□□ 1.36
TMEM41A-201ENST00000296254 LMOD2Q6P5Q4 547 aa23.55■■□□□ 1.36
TMEM41A-201ENST00000296254 ALS2Q96Q42 1657 aa23.54■■□□□ 1.36
TMEM41A-201ENST00000296254 PLEKHG5O94827 1062 aa23.54■■□□□ 1.36
TMEM41A-201ENST00000296254 TRAK1Q9UPV9 953 aa23.54■■□□□ 1.36
TMEM41A-201ENST00000296254 NRAPQ86VF7 1730 aa23.53■■□□□ 1.36
TMEM41A-201ENST00000296254 SEPT12Q8IYM1 358 aa23.53■■□□□ 1.36
TMEM41A-201ENST00000296254 HIRIP3Q9BW71 556 aaPredicted RBP23.53■■□□□ 1.36
TMEM41A-201ENST00000296254 PRR36Q9H6K5 1346 aa23.53■■□□□ 1.36
TMEM41A-201ENST00000296254 MINK1Q8N4C8 1332 aaPredicted RBP23.51■■□□□ 1.35
TMEM41A-201ENST00000296254 GPRASP1Q5JY77 1395 aa23.51■■□□□ 1.35
TMEM41A-201ENST00000296254 ONECUT3O60422 494 aaPredicted RBP23.5■■□□□ 1.35
TMEM41A-201ENST00000296254 FAM83GA6ND36 823 aa23.49■■□□□ 1.35
TMEM41A-201ENST00000296254 DCAF11Q8TEB1 546 aa23.49■■□□□ 1.35
TMEM41A-201ENST00000296254 CCDC9Q9Y3X0 531 aaKnown RBP23.49■■□□□ 1.35
TMEM41A-201ENST00000296254 ARHGEF28Q8N1W1 1705 aaKnown RBP23.48■■□□□ 1.35
TMEM41A-201ENST00000296254 CRYBG1Q9Y4K1 1723 aa23.48■■□□□ 1.35
TMEM41A-201ENST00000296254 COL14A1Q05707 1796 aaKnown RBP23.48■■□□□ 1.35
TMEM41A-201ENST00000296254 KDM2AQ9Y2K7 1162 aa23.48■■□□□ 1.35
TMEM41A-201ENST00000296254 WASLO00401 505 aaPredicted RBP23.47■■□□□ 1.35
TMEM41A-201ENST00000296254 STAC3Q96MF2 364 aa23.47■■□□□ 1.35
TMEM41A-201ENST00000296254 ATP7BP35670 1465 aa23.47■■□□□ 1.35
TMEM41A-201ENST00000296254 KRT27Q7Z3Y8 459 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms