RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 XIRP1Q702N8 1843 aaKnown RBP31.94■■■□□ 2.7
LINC01116-201ENST00000295549 MSH6P52701 1360 aa31.93■■■□□ 2.7
LINC01116-201ENST00000295549 USP47Q96K76 1375 aa31.92■■■□□ 2.7
LINC01116-201ENST00000295549 DCCP43146 1447 aa31.89■■■□□ 2.69
LINC01116-201ENST00000295549 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.88■■■□□ 2.69
LINC01116-201ENST00000295549 CADPS2Q86UW7 1296 aa31.86■■■□□ 2.69
LINC01116-201ENST00000295549 MINK1Q8N4C8 1332 aaPredicted RBP31.86■■■□□ 2.69
LINC01116-201ENST00000295549 ST20-MTHFSA0A0A6YYL1 179 aa31.85■■■□□ 2.69
LINC01116-201ENST00000295549 ATF3P18847 181 aa31.85■■■□□ 2.69
LINC01116-201ENST00000295549 NALCNQ8IZF0 1738 aa31.85■■■□□ 2.69
LINC01116-201ENST00000295549 EIF4G2P78344 907 aaKnown RBP eCLIP31.83■■■□□ 2.69
LINC01116-201ENST00000295549 SBNO2Q9Y2G9 1366 aa31.83■■■□□ 2.69
LINC01116-201ENST00000295549 HIRIP3Q9BW71 556 aaPredicted RBP31.83■■■□□ 2.69
LINC01116-201ENST00000295549 ADGRB2O60241 1585 aa31.81■■■□□ 2.68
LINC01116-201ENST00000295549 CDC42BPGQ6DT37 1551 aa31.8■■■□□ 2.68
LINC01116-201ENST00000295549 WASLO00401 505 aaPredicted RBP31.79■■■□□ 2.68
LINC01116-201ENST00000295549 SLC24A1O60721 1099 aa31.79■■■□□ 2.68
LINC01116-201ENST00000295549 TOM1O60784 492 aa31.79■■■□□ 2.68
LINC01116-201ENST00000295549 TESK2Q96S53 571 aa31.79■■■□□ 2.68
LINC01116-201ENST00000295549 QRICH2Q9H0J4 1663 aa31.77■■■□□ 2.68
LINC01116-201ENST00000295549 HSPA5P11021 654 aaKnown RBP31.76■■■□□ 2.68
LINC01116-201ENST00000295549 SLAIN2Q9P270 581 aa31.75■■■□□ 2.67
LINC01116-201ENST00000295549 UBAP1LF5GYI3 381 aa31.75■■■□□ 2.67
LINC01116-201ENST00000295549 EVC2Q86UK5 1308 aa31.74■■■□□ 2.67
LINC01116-201ENST00000295549 CDK19Q9BWU1 502 aa31.73■■■□□ 2.67
LINC01116-201ENST00000295549 MST1RQ04912 1400 aa31.73■■■□□ 2.67
LINC01116-201ENST00000295549 TULP4Q9NRJ4 1543 aa31.68■■■□□ 2.66
LINC01116-201ENST00000295549 C1orf167Q5SNV9 1468 aa31.68■■■□□ 2.66
LINC01116-201ENST00000295549 ANKARQ7Z5J8 1434 aa31.67■■■□□ 2.66
LINC01116-201ENST00000295549 FMN2Q9NZ56 1722 aa31.66■■■□□ 2.66
LINC01116-201ENST00000295549 NUTM2FA1L443 756 aa31.66■■■□□ 2.66
LINC01116-201ENST00000295549 SRPK2P78362 688 aaKnown RBP31.66■■■□□ 2.66
LINC01116-201ENST00000295549 TMF1P82094 1093 aa31.65■■■□□ 2.66
LINC01116-201ENST00000295549 PUS7Q96PZ0 661 aaKnown RBP31.64■■■□□ 2.66
LINC01116-201ENST00000295549 CABP2Q9NPB3 220 aa31.64■■■□□ 2.66
LINC01116-201ENST00000295549 NUDT16Q96DE0 195 aaKnown RBP31.63■■■□□ 2.65
LINC01116-201ENST00000295549 PRR36Q9H6K5 1346 aa31.62■■■□□ 2.65
LINC01116-201ENST00000295549 PIP4K2BP78356 416 aa31.6■■■□□ 2.65
LINC01116-201ENST00000295549 ATP7BP35670 1465 aa31.59■■■□□ 2.65
LINC01116-201ENST00000295549 DISP3Q9P2K9 1392 aa31.59■■■□□ 2.65
LINC01116-201ENST00000295549 ESCO1Q5FWF5 840 aa31.59■■■□□ 2.65
LINC01116-201ENST00000295549 BRINP3Q76B58 766 aa31.59■■■□□ 2.65
LINC01116-201ENST00000295549 ORAI2Q96SN7 254 aa31.59■■■□□ 2.65
LINC01116-201ENST00000295549 CCDC61Q9Y6R9 512 aa31.59■■■□□ 2.65
LINC01116-201ENST00000295549 CDCA8Q53HL2 280 aa31.58■■■□□ 2.65
LINC01116-201ENST00000295549 USP32Q8NFA0 1604 aa31.57■■■□□ 2.64
LINC01116-201ENST00000295549 FBXO41Q8TF61 875 aa31.57■■■□□ 2.64
LINC01116-201ENST00000295549 ATAD2Q6PL18 1390 aa31.56■■■□□ 2.64
LINC01116-201ENST00000295549 SCAF1Q9H7N4 1312 aaKnown RBP31.55■■■□□ 2.64
LINC01116-201ENST00000295549 PHF8Q9UPP1 1060 aa31.53■■■□□ 2.64
LINC01116-201ENST00000295549 PLEKHG3A1L390 1219 aa31.5■■■□□ 2.63
LINC01116-201ENST00000295549 ROBO1Q9Y6N7 1651 aa31.5■■■□□ 2.63
LINC01116-201ENST00000295549 PPIP5K1Q6PFW1 1433 aa31.48■■■□□ 2.63
LINC01116-201ENST00000295549 C11orf95C9JLR9 678 aaPredicted RBP31.48■■■□□ 2.63
LINC01116-201ENST00000295549 CABP1Q9NZU7 370 aa31.48■■■□□ 2.63
LINC01116-201ENST00000295549 PMFBP1Q8TBY8 1022 aa31.47■■■□□ 2.63
LINC01116-201ENST00000295549 RGPD8O14715 1765 aaPredicted RBP31.47■■■□□ 2.63
LINC01116-201ENST00000295549 TOPAZ1Q8N9V7 1692 aa31.46■■■□□ 2.63
LINC01116-201ENST00000295549 ITSN1Q15811 1721 aa31.45■■■□□ 2.62
LINC01116-201ENST00000295549 FOXO3O43524 673 aa31.44■■■□□ 2.62
LINC01116-201ENST00000295549 NINLQ9Y2I6 1382 aa31.44■■■□□ 2.62
LINC01116-201ENST00000295549 NPHP3Q7Z494 1330 aa31.43■■■□□ 2.62
LINC01116-201ENST00000295549 KIF1AQ12756 1690 aa31.43■■■□□ 2.62
LINC01116-201ENST00000295549 POLR3AO14802 1390 aaPredicted RBP31.43■■■□□ 2.62
LINC01116-201ENST00000295549 NGDNQ8NEJ9 315 aaKnown RBP31.42■■■□□ 2.62
LINC01116-201ENST00000295549 ACEP12821 1306 aa31.41■■■□□ 2.62
LINC01116-201ENST00000295549 TMC1Q8TDI8 760 aa31.41■■■□□ 2.62
LINC01116-201ENST00000295549 SLC12A5Q9H2X9 1139 aa31.41■■■□□ 2.62
LINC01116-201ENST00000295549 KIF7Q2M1P5 1343 aa31.4■■■□□ 2.62
LINC01116-201ENST00000295549 DDX17Q92841 729 aaKnown RBP31.4■■■□□ 2.62
LINC01116-201ENST00000295549 AHDC1Q5TGY3 1603 aaPredicted RBP31.39■■■□□ 2.62
LINC01116-201ENST00000295549 SOS2Q07890 1332 aaPredicted RBP31.37■■■□□ 2.61
LINC01116-201ENST00000295549 PSME1Q06323 249 aa31.37■■■□□ 2.61
LINC01116-201ENST00000295549 POLR3GLQ9BT43 218 aa31.36■■■□□ 2.61
LINC01116-201ENST00000295549 ZNF692Q9BU19 519 aaPredicted RBP31.36■■■□□ 2.61
LINC01116-201ENST00000295549 NHSL1Q5SYE7 1610 aa31.36■■■□□ 2.61
LINC01116-201ENST00000295549 CPSF1Q10570 1443 aaKnown RBP31.35■■■□□ 2.61
LINC01116-201ENST00000295549 WASHC2AQ641Q2 1341 aa31.35■■■□□ 2.61
LINC01116-201ENST00000295549 KRT28Q7Z3Y7 464 aa31.34■■■□□ 2.61
LINC01116-201ENST00000295549 CCDC7Q96M83 1385 aa31.34■■■□□ 2.61
LINC01116-201ENST00000295549 HSPA1LP34931 641 aa31.33■■■□□ 2.61
LINC01116-201ENST00000295549 TERF2IPQ9NYB0 399 aa31.33■■■□□ 2.61
LINC01116-201ENST00000295549 PXDNQ92626 1479 aa31.32■■■□□ 2.6
LINC01116-201ENST00000295549 XPCQ01831 940 aaPredicted RBP31.32■■■□□ 2.6
LINC01116-201ENST00000295549 ILDR1Q86SU0 546 aaPredicted RBP31.32■■■□□ 2.6
LINC01116-201ENST00000295549 CD163L1Q9NR16 1453 aa31.32■■■□□ 2.6
LINC01116-201ENST00000295549 HDGFL2Q7Z4V5 671 aaPredicted RBP31.31■■■□□ 2.6
LINC01116-201ENST00000295549 BRD4O60885 1362 aaPredicted RBP31.3■■■□□ 2.6
LINC01116-201ENST00000295549 LRRC59Q96AG4 307 aaKnown RBP31.29■■■□□ 2.6
LINC01116-201ENST00000295549 ANKRD36BQ8N2N9 1353 aa31.29■■■□□ 2.6
LINC01116-201ENST00000295549 A0A1W2PP64 1363 aa31.28■■■□□ 2.6
LINC01116-201ENST00000295549 SBNO1A3KN83 1393 aa31.28■■■□□ 2.6
LINC01116-201ENST00000295549 USP6P35125 1406 aa31.28■■■□□ 2.6
LINC01116-201ENST00000295549 PHLPP1O60346 1717 aa31.27■■■□□ 2.6
LINC01116-201ENST00000295549 KTN1Q86UP2 1357 aaKnown RBP31.26■■■□□ 2.6
LINC01116-201ENST00000295549 COL16A1Q07092 1604 aaPredicted RBP31.25■■■□□ 2.59
LINC01116-201ENST00000295549 MYOM1P52179 1685 aa31.25■■■□□ 2.59
LINC01116-201ENST00000295549 SSH2Q76I76 1423 aa31.24■■■□□ 2.59
LINC01116-201ENST00000295549 SPATA31A3Q5VYP0 1347 aa31.23■■■□□ 2.59
LINC01116-201ENST00000295549 AKAP12Q02952 1782 aa31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms