RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 MCCP23508 829 aa5.95□□□□□ -1.46
UBR1-201ENST00000290650 NFKBIBQ15653 356 aa5.95□□□□□ -1.46
UBR1-201ENST00000290650 NLRP6P59044 892 aa5.95□□□□□ -1.46
UBR1-201ENST00000290650 SULT6B1Q6IMI4 303 aa5.95□□□□□ -1.46
UBR1-201ENST00000290650 SMG6Q86US8 1419 aaKnown RBP5.95□□□□□ -1.46
UBR1-201ENST00000290650 CEBPAP49715 358 aaPredicted RBP5.94□□□□□ -1.46
UBR1-201ENST00000290650 SYCP2Q9BX26 1530 aa5.94□□□□□ -1.46
UBR1-201ENST00000290650 ROCK1Q13464 1354 aa5.94□□□□□ -1.46
UBR1-201ENST00000290650 GOLGA6L4A6NEF3 574 aa5.94□□□□□ -1.46
UBR1-201ENST00000290650 KDM4AO75164 1064 aa5.94□□□□□ -1.46
UBR1-201ENST00000290650 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.94□□□□□ -1.46
UBR1-201ENST00000290650 WWC1Q8IX03 1113 aa5.94□□□□□ -1.46
UBR1-201ENST00000290650 SYTL4Q96C24 671 aaPredicted RBP5.94□□□□□ -1.46
UBR1-201ENST00000290650 BRPF3Q9ULD4 1205 aa5.94□□□□□ -1.46
UBR1-201ENST00000290650 MAP3K1Q13233 1512 aa5.94□□□□□ -1.46
UBR1-201ENST00000290650 GSE1Q14687 1217 aa5.94□□□□□ -1.46
UBR1-201ENST00000290650 ZRSR1Q15695 479 aaKnown RBP5.94□□□□□ -1.46
UBR1-201ENST00000290650 DRC7Q8IY82 874 aa5.94□□□□□ -1.46
UBR1-201ENST00000290650 DDX19BQ9UMR2 479 aa5.94□□□□□ -1.46
UBR1-201ENST00000290650 TNNQ9UQP3 1299 aa5.94□□□□□ -1.46
UBR1-201ENST00000290650 ATP10BO94823 1461 aa5.94□□□□□ -1.46
UBR1-201ENST00000290650 GOLGA6L3A6NEY3 463 aa5.94□□□□□ -1.46
UBR1-201ENST00000290650 HSP90B1P14625 803 aaKnown RBP5.94□□□□□ -1.46
UBR1-201ENST00000290650 ABTB2Q8N961 1025 aa5.94□□□□□ -1.46
UBR1-201ENST00000290650 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.94□□□□□ -1.46
UBR1-201ENST00000290650 TEFQ10587 303 aa5.93□□□□□ -1.46
UBR1-201ENST00000290650 GBP4Q96PP9 640 aa5.93□□□□□ -1.46
UBR1-201ENST00000290650 MAGI3Q5TCQ9 1506 aa5.93□□□□□ -1.46
UBR1-201ENST00000290650 USHBP1Q8N6Y0 703 aa5.93□□□□□ -1.46
UBR1-201ENST00000290650 C22orf23Q9BZE7 217 aa5.93□□□□□ -1.46
UBR1-201ENST00000290650 MCM10Q7L590 875 aa5.93□□□□□ -1.46
UBR1-201ENST00000290650 BACH2Q9BYV9 841 aa5.93□□□□□ -1.46
UBR1-201ENST00000290650 LMOD3Q0VAK6 560 aa5.93□□□□□ -1.46
UBR1-201ENST00000290650 GORABQ5T7V8 394 aa5.93□□□□□ -1.46
UBR1-201ENST00000290650 ESCO1Q5FWF5 840 aa5.92□□□□□ -1.46
UBR1-201ENST00000290650 ISY1Q9ULR0 285 aaKnown RBP5.92□□□□□ -1.46
UBR1-201ENST00000290650 C1orf141Q5JVX7 400 aa5.92□□□□□ -1.46
UBR1-201ENST00000290650 HMMRO75330 724 aa5.92□□□□□ -1.46
UBR1-201ENST00000290650 MSNP26038 577 aaKnown RBP5.92□□□□□ -1.46
UBR1-201ENST00000290650 C9orf78Q9NZ63 289 aaPredicted RBP5.92□□□□□ -1.46
UBR1-201ENST00000290650 TAF7LQ5H9L4 462 aa5.92□□□□□ -1.46
UBR1-201ENST00000290650 NME9Q86XW9 330 aa5.92□□□□□ -1.46
UBR1-201ENST00000290650 FBXW7Q969H0 707 aa5.92□□□□□ -1.46
UBR1-201ENST00000290650 SLFN5Q08AF3 891 aa5.92□□□□□ -1.46
UBR1-201ENST00000290650 NOS1P29475 1434 aa5.92□□□□□ -1.46
UBR1-201ENST00000290650 FAM83GA6ND36 823 aa5.92□□□□□ -1.46
UBR1-201ENST00000290650 IDI1Q13907 227 aa5.92□□□□□ -1.46
UBR1-201ENST00000290650 EMILIN1Q9Y6C2 1016 aa5.92□□□□□ -1.46
UBR1-201ENST00000290650 EIF4G3O43432 1585 aaKnown RBP5.92□□□□□ -1.46
UBR1-201ENST00000290650 ADGRL1O94910 1474 aa5.92□□□□□ -1.46
UBR1-201ENST00000290650 TWISTNBQ3B726 338 aaPredicted RBP5.92□□□□□ -1.46
UBR1-201ENST00000290650 ANO2Q9NQ90 1003 aa5.92□□□□□ -1.46
UBR1-201ENST00000290650 KIAA0556O60303 1618 aa5.91□□□□□ -1.46
UBR1-201ENST00000290650 TMEM57Q8N5G2 664 aa5.91□□□□□ -1.46
UBR1-201ENST00000290650 DDX49Q9Y6V7 483 aaKnown RBP5.91□□□□□ -1.46
UBR1-201ENST00000290650 WDR62O43379 1518 aa5.91□□□□□ -1.46
UBR1-201ENST00000290650 L1TD1Q5T7N2 865 aaKnown RBP5.91□□□□□ -1.46
UBR1-201ENST00000290650 MPNDQ8N594 471 aa5.91□□□□□ -1.46
UBR1-201ENST00000290650 SMARCA5O60264 1052 aaPredicted RBP5.91□□□□□ -1.46
UBR1-201ENST00000290650 ZRANB1Q9UGI0 708 aa5.91□□□□□ -1.46
UBR1-201ENST00000290650 SLC4A2P04920 1241 aa5.91□□□□□ -1.46
UBR1-201ENST00000290650 MCTP1Q6DN14 999 aa5.91□□□□□ -1.46
UBR1-201ENST00000290650 SETD1BQ9UPS6 1966 aaKnown RBP5.91□□□□□ -1.46
UBR1-201ENST00000290650 FAM177BA6PVY3 158 aa5.91□□□□□ -1.46
UBR1-201ENST00000290650 ITSN2Q9NZM3 1697 aa5.91□□□□□ -1.46
UBR1-201ENST00000290650 ADAMTS12P58397 1594 aa5.91□□□□□ -1.46
UBR1-201ENST00000290650 IGHDP01880 384 aa5.91□□□□□ -1.46
UBR1-201ENST00000290650 NCKAP5LQ9HCH0 1330 aa5.9□□□□□ -1.46
UBR1-201ENST00000290650 TMPOP42166 694 aaKnown RBP5.9□□□□□ -1.46
UBR1-201ENST00000290650 FAM135AQ9P2D6 1515 aa5.9□□□□□ -1.46
UBR1-201ENST00000290650 EVA1CP58658 441 aa5.9□□□□□ -1.46
UBR1-201ENST00000290650 NLRP2Q9NX02 1062 aa5.9□□□□□ -1.46
UBR1-201ENST00000290650 GNL2Q13823 731 aaKnown RBP5.9□□□□□ -1.47
UBR1-201ENST00000290650 DUSP27Q5VZP5 1158 aa5.9□□□□□ -1.47
UBR1-201ENST00000290650 CD109Q6YHK3 1445 aa5.9□□□□□ -1.47
UBR1-201ENST00000290650 GNAI1P63096 354 aa5.9□□□□□ -1.47
UBR1-201ENST00000290650 SIL1Q9H173 461 aa5.9□□□□□ -1.47
UBR1-201ENST00000290650 TOMM22Q9NS69 142 aa5.9□□□□□ -1.47
UBR1-201ENST00000290650 FANCAO15360 1455 aa5.9□□□□□ -1.47
UBR1-201ENST00000290650 ST18O60284 1047 aa5.9□□□□□ -1.47
UBR1-201ENST00000290650 GPRASP1Q5JY77 1395 aa5.89□□□□□ -1.47
UBR1-201ENST00000290650 SSH1Q8WYL5 1049 aa5.89□□□□□ -1.47
UBR1-201ENST00000290650 TRAPPC8Q9Y2L5 1435 aa5.89□□□□□ -1.47
UBR1-201ENST00000290650 F6X3S4 739 aa5.89□□□□□ -1.47
UBR1-201ENST00000290650 MYL6BP14649 208 aa5.89□□□□□ -1.47
UBR1-201ENST00000290650 CCDC27Q2M243 656 aa5.89□□□□□ -1.47
UBR1-201ENST00000290650 TSHZ3Q63HK5 1081 aa5.89□□□□□ -1.47
UBR1-201ENST00000290650 SPINK5Q9NQ38 1064 aaPredicted RBP5.89□□□□□ -1.47
UBR1-201ENST00000290650 PRKCSHP14314 528 aaPredicted RBP5.89□□□□□ -1.47
UBR1-201ENST00000290650 KIF16BQ96L93 1317 aa5.89□□□□□ -1.47
UBR1-201ENST00000290650 CREBRFQ8IUR6 639 aa5.89□□□□□ -1.47
UBR1-201ENST00000290650 RTEL1-TNFRSF6BF6WH68 1400 aa5.89□□□□□ -1.47
UBR1-201ENST00000290650 DDX54Q8TDD1 881 aaKnown RBP5.89□□□□□ -1.47
UBR1-201ENST00000290650 NUDT16Q96DE0 195 aaKnown RBP5.88□□□□□ -1.47
UBR1-201ENST00000290650 LARP6Q9BRS8 491 aaKnown RBP5.88□□□□□ -1.47
UBR1-201ENST00000290650 MVPQ14764 893 aaKnown RBP5.88□□□□□ -1.47
UBR1-201ENST00000290650 ATF7IPQ6VMQ6 1270 aa5.88□□□□□ -1.47
UBR1-201ENST00000290650 STK11IPQ8N1F8 1099 aa5.88□□□□□ -1.47
UBR1-201ENST00000290650 IL1RAPL2Q9NP60 686 aa5.88□□□□□ -1.47
UBR1-201ENST00000290650 RARSP54136 660 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms