RNA–Protein interactions for RNA: ENST00000290399.10

SIM2-201, Transcript of SIM bHLH transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM2, Length 4,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-201ENST00000290399 PDZRN3Q9UPQ7 1066 aa22.59■■□□□ 1.21
SIM2-201ENST00000290399 GORABQ5T7V8 394 aa22.58■■□□□ 1.21
SIM2-201ENST00000290399 DISP3Q9P2K9 1392 aa22.58■■□□□ 1.2
SIM2-201ENST00000290399 MSNP26038 577 aaKnown RBP22.57■■□□□ 1.2
SIM2-201ENST00000290399 C22orf23Q9BZE7 217 aa22.57■■□□□ 1.2
SIM2-201ENST00000290399 SLC26A8Q96RN1 970 aa22.56■■□□□ 1.2
SIM2-201ENST00000290399 TCOF1Q13428 1488 aaKnown RBP22.56■■□□□ 1.2
SIM2-201ENST00000290399 IDI1Q13907 227 aa22.56■■□□□ 1.2
SIM2-201ENST00000290399 TWISTNBQ3B726 338 aaPredicted RBP22.56■■□□□ 1.2
SIM2-201ENST00000290399 C20orf194Q5TEA3 1177 aa22.56■■□□□ 1.2
SIM2-201ENST00000290399 NOB1Q9ULX3 412 aaKnown RBP22.56■■□□□ 1.2
SIM2-201ENST00000290399 ATAD2Q6PL18 1390 aa22.55■■□□□ 1.2
SIM2-201ENST00000290399 SULT6B1Q6IMI4 303 aa22.55■■□□□ 1.2
SIM2-201ENST00000290399 C9orf78Q9NZ63 289 aaPredicted RBP22.55■■□□□ 1.2
SIM2-201ENST00000290399 CFAP43Q8NDM7 1665 aa22.55■■□□□ 1.2
SIM2-201ENST00000290399 TAF7LQ5H9L4 462 aa22.54■■□□□ 1.2
SIM2-201ENST00000290399 RTEL1-TNFRSF6BF6WH68 1400 aa22.53■■□□□ 1.2
SIM2-201ENST00000290399 REC8O95072 547 aa22.53■■□□□ 1.2
SIM2-201ENST00000290399 FANCAO15360 1455 aa22.53■■□□□ 1.2
SIM2-201ENST00000290399 DDX11L8A8MPP1 907 aa22.52■■□□□ 1.2
SIM2-201ENST00000290399 WAPLQ7Z5K2 1190 aa22.52■■□□□ 1.2
SIM2-201ENST00000290399 C1orf115Q9H7X2 142 aa22.52■■□□□ 1.2
SIM2-201ENST00000290399 WDR62O43379 1518 aa22.52■■□□□ 1.2
SIM2-201ENST00000290399 ATF7IPQ6VMQ6 1270 aa22.51■■□□□ 1.19
SIM2-201ENST00000290399 ABTB2Q8N961 1025 aa22.51■■□□□ 1.19
SIM2-201ENST00000290399 ADAMTS12P58397 1594 aa22.51■■□□□ 1.19
SIM2-201ENST00000290399 ZNF692Q9BU19 519 aaPredicted RBP22.51■■□□□ 1.19
SIM2-201ENST00000290399 NFKBIBQ15653 356 aa22.51■■□□□ 1.19
SIM2-201ENST00000290399 RRS1Q15050 365 aaKnown RBP22.51■■□□□ 1.19
SIM2-201ENST00000290399 SKAP1Q86WV1 359 aa22.51■■□□□ 1.19
SIM2-201ENST00000290399 TMPOP42166 694 aaKnown RBP22.5■■□□□ 1.19
SIM2-201ENST00000290399 CHMP5Q9NZZ3 219 aa22.5■■□□□ 1.19
SIM2-201ENST00000290399 FBXO31Q5XUX0 539 aaPredicted RBP22.5■■□□□ 1.19
SIM2-201ENST00000290399 CCDC9Q9Y3X0 531 aaKnown RBP22.5■■□□□ 1.19
SIM2-201ENST00000290399 DDX49Q9Y6V7 483 aaKnown RBP22.5■■□□□ 1.19
SIM2-201ENST00000290399 KIAA0556O60303 1618 aa22.49■■□□□ 1.19
SIM2-201ENST00000290399 SYAP1Q96A49 352 aaPredicted RBP22.49■■□□□ 1.19
SIM2-201ENST00000290399 DHX29Q7Z478 1369 aaKnown RBP22.49■■□□□ 1.19
SIM2-201ENST00000290399 SCAF11Q99590 1463 aaKnown RBP22.49■■□□□ 1.19
SIM2-201ENST00000290399 NEXNQ0ZGT2 675 aa22.49■■□□□ 1.19
SIM2-201ENST00000290399 CCDC61Q9Y6R9 512 aa22.49■■□□□ 1.19
SIM2-201ENST00000290399 FOXD4L6Q3SYB3 417 aaPredicted RBP22.48■■□□□ 1.19
SIM2-201ENST00000290399 FOXD4L3Q6VB84 417 aaPredicted RBP22.48■■□□□ 1.19
SIM2-201ENST00000290399 MVPQ14764 893 aaKnown RBP22.48■■□□□ 1.19
SIM2-201ENST00000290399 CT47B1P0C2W7 299 aaPredicted RBP22.47■■□□□ 1.19
SIM2-201ENST00000290399 ANO2Q9NQ90 1003 aa22.47■■□□□ 1.19
SIM2-201ENST00000290399 TTC5Q8N0Z6 440 aa22.47■■□□□ 1.19
SIM2-201ENST00000290399 FCHSD2O94868 740 aa22.46■■□□□ 1.19
SIM2-201ENST00000290399 PLCH2O75038 1416 aa22.46■■□□□ 1.19
SIM2-201ENST00000290399 NOS1P29475 1434 aa22.46■■□□□ 1.19
SIM2-201ENST00000290399 RALGAPBQ86X10 1494 aa22.46■■□□□ 1.19
SIM2-201ENST00000290399 DIAPH3Q9NSV4 1193 aa22.46■■□□□ 1.19
SIM2-201ENST00000290399 DUSP27Q5VZP5 1158 aa22.45■■□□□ 1.18
SIM2-201ENST00000290399 GAS2L2Q8NHY3 880 aa22.45■■□□□ 1.18
SIM2-201ENST00000290399 HSP90B1P14625 803 aaKnown RBP22.45■■□□□ 1.18
SIM2-201ENST00000290399 INTS3Q68E01 1043 aaKnown RBP22.45■■□□□ 1.18
SIM2-201ENST00000290399 NUDT16Q96DE0 195 aaKnown RBP22.45■■□□□ 1.18
SIM2-201ENST00000290399 THUMPD2Q9BTF0 503 aaKnown RBP22.44■■□□□ 1.18
SIM2-201ENST00000290399 C14orf93Q9H972 538 aaKnown RBP22.44■■□□□ 1.18
SIM2-201ENST00000290399 SYCP2Q9BX26 1530 aa22.44■■□□□ 1.18
SIM2-201ENST00000290399 DRC7Q8IY82 874 aa22.44■■□□□ 1.18
SIM2-201ENST00000290399 THEMISQ8N1K5 641 aaPredicted RBP22.44■■□□□ 1.18
SIM2-201ENST00000290399 GNL2Q13823 731 aaKnown RBP22.43■■□□□ 1.18
SIM2-201ENST00000290399 RAPGEF4Q8WZA2 1011 aa22.43■■□□□ 1.18
SIM2-201ENST00000290399 NLRP2Q9NX02 1062 aa22.42■■□□□ 1.18
SIM2-201ENST00000290399 NINLQ9Y2I6 1382 aa22.42■■□□□ 1.18
SIM2-201ENST00000290399 PRAG1Q86YV5 1406 aa22.42■■□□□ 1.18
SIM2-201ENST00000290399 DDX58O95786 925 aaKnown RBP22.41■■□□□ 1.18
SIM2-201ENST00000290399 SLC4A2P04920 1241 aa22.41■■□□□ 1.18
SIM2-201ENST00000290399 RARSP54136 660 aaKnown RBP22.41■■□□□ 1.18
SIM2-201ENST00000290399 ESCO1Q5FWF5 840 aa22.41■■□□□ 1.18
SIM2-201ENST00000290399 CDC45O75419 566 aa22.41■■□□□ 1.18
SIM2-201ENST00000290399 UBTFL1P0CB47 393 aaPredicted RBP22.41■■□□□ 1.18
SIM2-201ENST00000290399 IFIT2P09913 472 aaKnown RBP22.41■■□□□ 1.18
SIM2-201ENST00000290399 TESK2Q96S53 571 aa22.41■■□□□ 1.18
SIM2-201ENST00000290399 DISP1Q96F81 1524 aa22.41■■□□□ 1.18
SIM2-201ENST00000290399 ITSN2Q9NZM3 1697 aa22.4■■□□□ 1.18
SIM2-201ENST00000290399 FAM135AQ9P2D6 1515 aa22.4■■□□□ 1.18
SIM2-201ENST00000290399 AMER1Q5JTC6 1135 aaPredicted RBP22.4■■□□□ 1.18
SIM2-201ENST00000290399 GOLGA6L6A8MZA4 724 aa22.39■■□□□ 1.18
SIM2-201ENST00000290399 AIMP1Q12904 312 aaKnown RBP22.39■■□□□ 1.17
SIM2-201ENST00000290399 TRAPPC8Q9Y2L5 1435 aa22.39■■□□□ 1.17
SIM2-201ENST00000290399 NRDCO43847 1150 aa22.39■■□□□ 1.17
SIM2-201ENST00000290399 EVA1CP58658 441 aa22.39■■□□□ 1.17
SIM2-201ENST00000290399 NFE2L2Q16236 605 aa22.39■■□□□ 1.17
SIM2-201ENST00000290399 CCDC30Q5VVM6 783 aa22.39■■□□□ 1.17
SIM2-201ENST00000290399 KIF21AQ7Z4S6 1674 aa22.38■■□□□ 1.17
SIM2-201ENST00000290399 HTATSF1O43719 755 aaKnown RBP22.38■■□□□ 1.17
SIM2-201ENST00000290399 GCC1Q96CN9 775 aa22.38■■□□□ 1.17
SIM2-201ENST00000290399 KDM5BQ9UGL1 1544 aa22.38■■□□□ 1.17
SIM2-201ENST00000290399 GNAI3P08754 354 aa22.38■■□□□ 1.17
SIM2-201ENST00000290399 RUFY2Q8WXA3 655 aa22.38■■□□□ 1.17
SIM2-201ENST00000290399 SSH1Q8WYL5 1049 aa22.37■■□□□ 1.17
SIM2-201ENST00000290399 SKOR2Q2VWA4 1001 aaPredicted RBP22.37■■□□□ 1.17
SIM2-201ENST00000290399 TMEM57Q8N5G2 664 aa22.37■■□□□ 1.17
SIM2-201ENST00000290399 PZPP20742 1482 aa22.36■■□□□ 1.17
SIM2-201ENST00000290399 ATF3P18847 181 aa22.36■■□□□ 1.17
SIM2-201ENST00000290399 G3BP1Q13283 466 aaKnown RBP eCLIP22.36■■□□□ 1.17
SIM2-201ENST00000290399 GPRASP1Q5JY77 1395 aa22.36■■□□□ 1.17
SIM2-201ENST00000290399 FRAT2O75474 233 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms