RNA–Protein interactions for RNA: ENST00000290178.4

PAXBP1-201, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PAXBP1, Length 2,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-201ENST00000290178 CAMSAP1Q5T5Y3 1602 aa28.33■■■□□ 2.12
PAXBP1-201ENST00000290178 ZC3H13Q5T200 1668 aaKnown RBP28.32■■■□□ 2.12
PAXBP1-201ENST00000290178 IDI1Q13907 227 aa28.32■■■□□ 2.12
PAXBP1-201ENST00000290178 WWC1Q8IX03 1113 aa28.31■■■□□ 2.12
PAXBP1-201ENST00000290178 VGFO15240 615 aaPredicted RBP28.3■■■□□ 2.12
PAXBP1-201ENST00000290178 CABP2Q9NPB3 220 aa28.3■■■□□ 2.12
PAXBP1-201ENST00000290178 MTHFSP49914 203 aa28.29■■■□□ 2.12
PAXBP1-201ENST00000290178 CENPQQ7L2Z9 268 aaPredicted RBP28.28■■■□□ 2.12
PAXBP1-201ENST00000290178 STK26Q9P289 416 aa28.28■■■□□ 2.12
PAXBP1-201ENST00000290178 GLI2P10070 1586 aa28.27■■■□□ 2.12
PAXBP1-201ENST00000290178 DIP2CQ9Y2E4 1556 aa28.27■■■□□ 2.12
PAXBP1-201ENST00000290178 NEO1Q92859 1461 aa28.27■■■□□ 2.12
PAXBP1-201ENST00000290178 YEATS2Q9ULM3 1422 aa28.26■■■□□ 2.11
PAXBP1-201ENST00000290178 NEXMIFQ5QGS0 1516 aa28.25■■■□□ 2.11
PAXBP1-201ENST00000290178 EVC2Q86UK5 1308 aa28.25■■■□□ 2.11
PAXBP1-201ENST00000290178 CGNL1Q0VF96 1302 aa28.24■■■□□ 2.11
PAXBP1-201ENST00000290178 SHPRHQ149N8 1683 aa28.24■■■□□ 2.11
PAXBP1-201ENST00000290178 TCP11L2Q8N4U5 519 aa28.23■■■□□ 2.11
PAXBP1-201ENST00000290178 PIK3C2BO00750 1634 aa28.23■■■□□ 2.11
PAXBP1-201ENST00000290178 TULP4Q9NRJ4 1543 aa28.22■■■□□ 2.11
PAXBP1-201ENST00000290178 RUNDC1Q96C34 613 aa28.22■■■□□ 2.11
PAXBP1-201ENST00000290178 NGEFQ8N5V2 710 aa28.2■■■□□ 2.11
PAXBP1-201ENST00000290178 ARHGEF28Q8N1W1 1705 aaKnown RBP28.19■■■□□ 2.1
PAXBP1-201ENST00000290178 RGS3P49796 1198 aa28.18■■■□□ 2.1
PAXBP1-201ENST00000290178 PANK1Q8TE04 598 aa28.16■■■□□ 2.1
PAXBP1-201ENST00000290178 ANKRD36BQ8N2N9 1353 aa28.16■■■□□ 2.1
PAXBP1-201ENST00000290178 FBXO31Q5XUX0 539 aaPredicted RBP28.16■■■□□ 2.1
PAXBP1-201ENST00000290178 RICTORQ6R327 1708 aa28.15■■■□□ 2.1
PAXBP1-201ENST00000290178 SRPK2P78362 688 aaKnown RBP28.15■■■□□ 2.1
PAXBP1-201ENST00000290178 ARHGAP31Q2M1Z3 1444 aa28.15■■■□□ 2.1
PAXBP1-201ENST00000290178 FRAT1Q92837 279 aaPredicted RBP28.14■■■□□ 2.1
PAXBP1-201ENST00000290178 CFAP53Q96M91 514 aa28.14■■■□□ 2.1
PAXBP1-201ENST00000290178 SLC52A1Q9NWF4 448 aa28.14■■■□□ 2.1
PAXBP1-201ENST00000290178 IGHDP01880 384 aa28.14■■■□□ 2.1
PAXBP1-201ENST00000290178 CANXP27824 592 aaKnown RBP28.14■■■□□ 2.1
PAXBP1-201ENST00000290178 COG6Q9Y2V7 657 aa28.14■■■□□ 2.1
PAXBP1-201ENST00000290178 DEKP35659 375 aaKnown RBP28.13■■■□□ 2.09
PAXBP1-201ENST00000290178 CYB5RLQ6IPT4 315 aa28.13■■■□□ 2.09
PAXBP1-201ENST00000290178 MINK1Q8N4C8 1332 aaPredicted RBP28.12■■■□□ 2.09
PAXBP1-201ENST00000290178 U2AF1L5P0DN76 240 aaPredicted RBP28.12■■■□□ 2.09
PAXBP1-201ENST00000290178 U2AF1Q01081 240 aaKnown RBP eCLIP28.12■■■□□ 2.092e-6■■□□□ 13.4
PAXBP1-201ENST00000290178 PUS7Q96PZ0 661 aaKnown RBP28.12■■■□□ 2.09
PAXBP1-201ENST00000290178 LAS1LQ9Y4W2 734 aaKnown RBP28.11■■■□□ 2.09
PAXBP1-201ENST00000290178 IQSEC2Q5JU85 1478 aa28.11■■■□□ 2.09
PAXBP1-201ENST00000290178 GGNBP2Q9H3C7 697 aa28.11■■■□□ 2.09
PAXBP1-201ENST00000290178 USP32Q8NFA0 1604 aa28.11■■■□□ 2.09
PAXBP1-201ENST00000290178 MYO5BQ9ULV0 1848 aa28.11■■■□□ 2.09
PAXBP1-201ENST00000290178 PHF23Q9BUL5 403 aaPredicted RBP28.1■■■□□ 2.09
PAXBP1-201ENST00000290178 A0A1W2PP64 1363 aa28.1■■■□□ 2.09
PAXBP1-201ENST00000290178 C8orf34Q49A92 452 aa28.09■■■□□ 2.09
PAXBP1-201ENST00000290178 BCL2L13Q9BXK5 485 aa28.09■■■□□ 2.09
PAXBP1-201ENST00000290178 PRAM1Q96QH2 718 aa28.09■■■□□ 2.09
PAXBP1-201ENST00000290178 TNNQ9UQP3 1299 aa28.09■■■□□ 2.09
PAXBP1-201ENST00000290178 RARSP54136 660 aaKnown RBP28.08■■■□□ 2.09
PAXBP1-201ENST00000290178 PDE3AQ14432 1141 aa28.08■■■□□ 2.09
PAXBP1-201ENST00000290178 FAM161AQ3B820 660 aa28.06■■■□□ 2.08
PAXBP1-201ENST00000290178 WDR63Q8IWG1 891 aa28.06■■■□□ 2.08
PAXBP1-201ENST00000290178 BCL11AQ9H165 835 aa28.06■■■□□ 2.08
PAXBP1-201ENST00000290178 POGKQ9P215 609 aa28.05■■■□□ 2.08
PAXBP1-201ENST00000290178 ZFYVE9O95405 1425 aa28.05■■■□□ 2.08
PAXBP1-201ENST00000290178 CLUAP1Q96AJ1 413 aa28.04■■■□□ 2.08
PAXBP1-201ENST00000290178 NSD2O96028 1365 aa28.03■■■□□ 2.08
PAXBP1-201ENST00000290178 TMEM131LA2VDJ0 1609 aa28.03■■■□□ 2.08
PAXBP1-201ENST00000290178 PREX1Q8TCU6 1659 aa28.03■■■□□ 2.08
PAXBP1-201ENST00000290178 U2SURPO15042 1029 aaKnown RBP28.03■■■□□ 2.08
PAXBP1-201ENST00000290178 SLC4A3P48751 1232 aa28.03■■■□□ 2.08
PAXBP1-201ENST00000290178 RLBP1P12271 317 aa28.02■■■□□ 2.08
PAXBP1-201ENST00000290178 PTPRMP28827 1452 aa28.01■■■□□ 2.07
PAXBP1-201ENST00000290178 ABCC11Q96J66 1382 aa28.01■■■□□ 2.07
PAXBP1-201ENST00000290178 CCDC27Q2M243 656 aa28.01■■■□□ 2.07
PAXBP1-201ENST00000290178 RTL5Q5HYW3 569 aaPredicted RBP28.01■■■□□ 2.07
PAXBP1-201ENST00000290178 FYB1O15117 783 aa28■■■□□ 2.07
PAXBP1-201ENST00000290178 FAM69CQ0P6D2 419 aa28■■■□□ 2.07
PAXBP1-201ENST00000290178 STAG3Q9UJ98 1225 aa28■■■□□ 2.07
PAXBP1-201ENST00000290178 YTHDC2Q9H6S0 1430 aaKnown RBP27.99■■■□□ 2.07
PAXBP1-201ENST00000290178 TSR2Q969E8 191 aaKnown RBP27.97■■■□□ 2.07
PAXBP1-201ENST00000290178 DDRGK1Q96HY6 314 aa27.97■■■□□ 2.07
PAXBP1-201ENST00000290178 CDK19Q9BWU1 502 aa27.96■■■□□ 2.07
PAXBP1-201ENST00000290178 NINLQ9Y2I6 1382 aa27.95■■■□□ 2.07
PAXBP1-201ENST00000290178 TERF2IPQ9NYB0 399 aa27.95■■■□□ 2.07
PAXBP1-201ENST00000290178 PLEKHF1Q96S99 279 aa27.94■■■□□ 2.06
PAXBP1-201ENST00000290178 CABP1Q9NZU7 370 aa27.94■■■□□ 2.06
PAXBP1-201ENST00000290178 CD163L1Q9NR16 1453 aa27.94■■■□□ 2.06
PAXBP1-201ENST00000290178 MYH16Q9H6N6 1097 aa27.94■■■□□ 2.06
PAXBP1-201ENST00000290178 PCDHB15Q9Y5E8 787 aa27.93■■■□□ 2.06
PAXBP1-201ENST00000290178 ATAD2Q6PL18 1390 aa27.93■■■□□ 2.06
PAXBP1-201ENST00000290178 NEFMP07197 916 aa27.92■■■□□ 2.06
PAXBP1-201ENST00000290178 FBLN1P23142 703 aa27.92■■■□□ 2.06
PAXBP1-201ENST00000290178 WAPLQ7Z5K2 1190 aa27.91■■■□□ 2.06
PAXBP1-201ENST00000290178 ALKQ9UM73 1620 aa27.9■■■□□ 2.06
PAXBP1-201ENST00000290178 TMPOP42166 694 aaKnown RBP27.9■■■□□ 2.06
PAXBP1-201ENST00000290178 MLECQ14165 292 aa27.9■■■□□ 2.06
PAXBP1-201ENST00000290178 TRIM35Q9UPQ4 493 aa27.89■■■□□ 2.06
PAXBP1-201ENST00000290178 ADGRB2O60241 1585 aa27.87■■■□□ 2.05
PAXBP1-201ENST00000290178 COL3A1P02461 1466 aaPredicted RBP27.87■■■□□ 2.05
PAXBP1-201ENST00000290178 NLRP1Q9C000 1473 aa27.87■■■□□ 2.05
PAXBP1-201ENST00000290178 HDGFL2Q7Z4V5 671 aaPredicted RBP27.87■■■□□ 2.05
PAXBP1-201ENST00000290178 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.87■■■□□ 2.05
PAXBP1-201ENST00000290178 EXOSC9Q06265 439 aaKnown RBP27.87■■■□□ 2.05
PAXBP1-201ENST00000290178 MAPK8IP3Q9UPT6 1336 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms