RNA–Protein interactions for RNA: ENST00000289893.8

MACF1-201, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5 BASIC

Gene MACF1, Length 19,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-201ENST00000289893 GAPVD1Q14C86 1478 aa4.28□□□□□ -1.72
MACF1-201ENST00000289893 CCDC173Q0VFZ6 552 aa4.28□□□□□ -1.72
MACF1-201ENST00000289893 PDCL3Q9H2J4 239 aa4.28□□□□□ -1.72
MACF1-201ENST00000289893 TERF2IPQ9NYB0 399 aa4.28□□□□□ -1.72
MACF1-201ENST00000289893 SAMD1Q6SPF0 538 aaPredicted RBP4.28□□□□□ -1.72
MACF1-201ENST00000289893 NGDNQ8NEJ9 315 aaKnown RBP4.28□□□□□ -1.72
MACF1-201ENST00000289893 PLIN1O60240 522 aa4.28□□□□□ -1.72
MACF1-201ENST00000289893 REC8O95072 547 aa4.28□□□□□ -1.72
MACF1-201ENST00000289893 MAPK8IP2Q13387 824 aaPredicted RBP4.28□□□□□ -1.72
MACF1-201ENST00000289893 SYNE3Q6ZMZ3 975 aa4.28□□□□□ -1.72
MACF1-201ENST00000289893 CENPQQ7L2Z9 268 aaPredicted RBP4.28□□□□□ -1.72
MACF1-201ENST00000289893 CPLX1O14810 134 aa4.28□□□□□ -1.72
MACF1-201ENST00000289893 LMOD3Q0VAK6 560 aa4.28□□□□□ -1.72
MACF1-201ENST00000289893 ODF2Q5BJF6 829 aa4.28□□□□□ -1.72
MACF1-201ENST00000289893 ELL2O00472 640 aaPredicted RBP4.28□□□□□ -1.72
MACF1-201ENST00000289893 CTDP1Q9Y5B0 961 aaPredicted RBP4.28□□□□□ -1.72
MACF1-201ENST00000289893 INCENPQ9NQS7 918 aa4.28□□□□□ -1.73
MACF1-201ENST00000289893 ERICH3Q5RHP9 1530 aa4.27□□□□□ -1.73
MACF1-201ENST00000289893 AMPHP49418 695 aa4.27□□□□□ -1.73
MACF1-201ENST00000289893 AMOTL1Q8IY63 956 aa4.27□□□□□ -1.73
MACF1-201ENST00000289893 PUS7Q96PZ0 661 aaKnown RBP4.27□□□□□ -1.73
MACF1-201ENST00000289893 NOL10Q9BSC4 688 aaKnown RBP4.27□□□□□ -1.73
MACF1-201ENST00000289893 DCTN1Q14203 1278 aa4.27□□□□□ -1.73
MACF1-201ENST00000289893 MYOM3Q5VTT5 1437 aa4.27□□□□□ -1.73
MACF1-201ENST00000289893 CCDC73Q6ZRK6 1079 aa4.27□□□□□ -1.73
MACF1-201ENST00000289893 UACAQ9BZF9 1416 aa4.27□□□□□ -1.73
MACF1-201ENST00000289893 COG6Q9Y2V7 657 aa4.27□□□□□ -1.73
MACF1-201ENST00000289893 GRIN2BQ13224 1484 aa4.27□□□□□ -1.73
MACF1-201ENST00000289893 HSP90AB3PQ58FF7 597 aa4.27□□□□□ -1.73
MACF1-201ENST00000289893 MYBBP1AQ9BQG0 1328 aaKnown RBP4.27□□□□□ -1.73
MACF1-201ENST00000289893 RBM10P98175 930 aaKnown RBP4.27□□□□□ -1.73
MACF1-201ENST00000289893 OFD1O75665 1012 aa4.27□□□□□ -1.73
MACF1-201ENST00000289893 USP47Q96K76 1375 aa4.27□□□□□ -1.73
MACF1-201ENST00000289893 EXOC6Q8TAG9 804 aa4.27□□□□□ -1.73
MACF1-201ENST00000289893 ABCA10Q8WWZ4 1543 aa4.27□□□□□ -1.73
MACF1-201ENST00000289893 NECTIN2Q92692 538 aa4.27□□□□□ -1.73
MACF1-201ENST00000289893 DNAJC2Q99543 621 aaKnown RBP4.27□□□□□ -1.73
MACF1-201ENST00000289893 NASPP49321 788 aaPredicted RBP4.26□□□□□ -1.73
MACF1-201ENST00000289893 C9orf78Q9NZ63 289 aaPredicted RBP4.26□□□□□ -1.73
MACF1-201ENST00000289893 SMC3Q9UQE7 1217 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 HFM1A2PYH4 1435 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 MSH5O43196 834 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 CALCOCO1Q9P1Z2 691 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 PAF1Q8N7H5 531 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 EPS15P42566 896 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 OLFM4Q6UX06 510 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 FMNL2Q96PY5 1086 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 NEXNQ0ZGT2 675 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 RNF214Q8ND24 703 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 NINLQ9Y2I6 1382 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 KIAA0586Q9BVV6 1533 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 PAXIP1Q6ZW49 1069 aaPredicted RBP4.26□□□□□ -1.73
MACF1-201ENST00000289893 AAMPQ13685 434 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 IL27Q8NEV9 243 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 MRE11P49959 708 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 NLRP13Q86W25 1043 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 RUFY2Q8WXA3 655 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 TRHP20396 242 aaPredicted RBP4.26□□□□□ -1.73
MACF1-201ENST00000289893 RRP1P56182 461 aaKnown RBP4.26□□□□□ -1.73
MACF1-201ENST00000289893 CHMP4CQ96CF2 233 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 CCDC39Q9UFE4 941 aa4.26□□□□□ -1.73
MACF1-201ENST00000289893 ZKSCAN1P17029 563 aaPredicted RBP4.26□□□□□ -1.73
MACF1-201ENST00000289893 RBM28Q9NW13 759 aaKnown RBP4.26□□□□□ -1.73
MACF1-201ENST00000289893 LRRFIP1Q32MZ4 808 aaKnown RBP4.25□□□□□ -1.73
MACF1-201ENST00000289893 LEKR1Q6ZMV7 388 aa4.25□□□□□ -1.73
MACF1-201ENST00000289893 CWC22Q9HCG8 908 aaKnown RBP4.25□□□□□ -1.73
MACF1-201ENST00000289893 KDM4AO75164 1064 aa4.25□□□□□ -1.73
MACF1-201ENST00000289893 TEFQ10587 303 aa4.25□□□□□ -1.73
MACF1-201ENST00000289893 GIMAP7Q8NHV1 300 aa4.25□□□□□ -1.73
MACF1-201ENST00000289893 NAT10Q9H0A0 1025 aaKnown RBP4.25□□□□□ -1.73
MACF1-201ENST00000289893 MTMR7Q9Y216 660 aa4.25□□□□□ -1.73
MACF1-201ENST00000289893 GOLGA6L10A6NI86 522 aa4.25□□□□□ -1.73
MACF1-201ENST00000289893 VPS37DQ86XT2 251 aa4.25□□□□□ -1.73
MACF1-201ENST00000289893 KIF1BO60333 1816 aa4.25□□□□□ -1.73
MACF1-201ENST00000289893 NFXL1Q6ZNB6 911 aa4.25□□□□□ -1.73
MACF1-201ENST00000289893 CNTLNQ9NXG0 1405 aa4.25□□□□□ -1.73
MACF1-201ENST00000289893 ZKSCAN2Q63HK3 967 aa4.25□□□□□ -1.73
MACF1-201ENST00000289893 RALYLQ86SE5 291 aaKnown RBP4.25□□□□□ -1.73
MACF1-201ENST00000289893 PAIP2Q9BPZ3 127 aaKnown RBP4.25□□□□□ -1.73
MACF1-201ENST00000289893 RPGRIP1LQ68CZ1 1315 aa4.25□□□□□ -1.73
MACF1-201ENST00000289893 PLEKHH2Q8IVE3 1493 aa4.25□□□□□ -1.73
MACF1-201ENST00000289893 TRDNQ13061 729 aa4.25□□□□□ -1.73
MACF1-201ENST00000289893 PDCL2Q8N4E4 241 aa4.25□□□□□ -1.73
MACF1-201ENST00000289893 MYO6Q9UM54 1294 aa4.25□□□□□ -1.73
MACF1-201ENST00000289893 NUTM2DQ5VT03 806 aaPredicted RBP4.25□□□□□ -1.73
MACF1-201ENST00000289893 FGD5Q6ZNL6 1462 aa4.25□□□□□ -1.73
MACF1-201ENST00000289893 FYB1O15117 783 aa4.24□□□□□ -1.73
MACF1-201ENST00000289893 KIAA0754O94854 1291 aa4.24□□□□□ -1.73
MACF1-201ENST00000289893 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.24□□□□□ -1.73
MACF1-201ENST00000289893 ARHGAP5Q13017 1502 aa4.24□□□□□ -1.73
MACF1-201ENST00000289893 AKNAQ7Z591 1439 aa4.24□□□□□ -1.73
MACF1-201ENST00000289893 CT47B1P0C2W7 299 aaPredicted RBP4.24□□□□□ -1.73
MACF1-201ENST00000289893 SETSIPP0DME0 302 aa4.24□□□□□ -1.73
MACF1-201ENST00000289893 AEBP1Q8IUX7 1158 aa4.24□□□□□ -1.73
MACF1-201ENST00000289893 SLC52A1Q9NWF4 448 aa4.24□□□□□ -1.73
MACF1-201ENST00000289893 C1orf141Q5JVX7 400 aa4.24□□□□□ -1.73
MACF1-201ENST00000289893 RNF20Q5VTR2 975 aa4.24□□□□□ -1.73
MACF1-201ENST00000289893 BRPF3Q9ULD4 1205 aa4.24□□□□□ -1.73
MACF1-201ENST00000289893 VGFO15240 615 aaPredicted RBP4.24□□□□□ -1.73
MACF1-201ENST00000289893 KINO60870 393 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms