RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 TPM2P07951 284 aa18.59■□□□□ 0.57
SHROOM4-201ENST00000289292 TEFQ10587 303 aa18.59■□□□□ 0.57
SHROOM4-201ENST00000289292 EID1Q9Y6B2 187 aa18.59■□□□□ 0.57
SHROOM4-201ENST00000289292 TSR1Q2NL82 804 aaKnown RBP18.58■□□□□ 0.57
SHROOM4-201ENST00000289292 TEX35Q5T0J7 233 aa18.58■□□□□ 0.57
SHROOM4-201ENST00000289292 MARCH6O60337 910 aa18.58■□□□□ 0.56
SHROOM4-201ENST00000289292 SYNJ1O43426 1573 aa18.58■□□□□ 0.56
SHROOM4-201ENST00000289292 PNISRQ8TF01 805 aaKnown RBP18.58■□□□□ 0.56
SHROOM4-201ENST00000289292 PCMTD1Q96MG8 357 aaPredicted RBP18.58■□□□□ 0.56
SHROOM4-201ENST00000289292 GNAI1P63096 354 aa18.57■□□□□ 0.56
SHROOM4-201ENST00000289292 SPC24Q8NBT2 197 aa18.57■□□□□ 0.56
SHROOM4-201ENST00000289292 APPP05067 770 aa18.57■□□□□ 0.56
SHROOM4-201ENST00000289292 ANKRD50Q9ULJ7 1429 aa18.57■□□□□ 0.56
SHROOM4-201ENST00000289292 GPS2Q13227 327 aa18.57■□□□□ 0.56
SHROOM4-201ENST00000289292 TSPY26PQ9H489 355 aa18.57■□□□□ 0.56
SHROOM4-201ENST00000289292 AKAP17AQ02040 695 aaKnown RBP18.56■□□□□ 0.56
SHROOM4-201ENST00000289292 FYCO1Q9BQS8 1478 aa18.56■□□□□ 0.56
SHROOM4-201ENST00000289292 TPM1P09493 284 aa18.55■□□□□ 0.56
SHROOM4-201ENST00000289292 GRPEL1Q9HAV7 217 aa18.55■□□□□ 0.56
SHROOM4-201ENST00000289292 CASKIN1Q8WXD9 1431 aa18.55■□□□□ 0.56
SHROOM4-201ENST00000289292 CPLX1O14810 134 aa18.55■□□□□ 0.56
SHROOM4-201ENST00000289292 NEK4P51957 841 aa18.55■□□□□ 0.56
SHROOM4-201ENST00000289292 CCDC173Q0VFZ6 552 aa18.55■□□□□ 0.56
SHROOM4-201ENST00000289292 TRIM29Q14134 588 aa18.55■□□□□ 0.56
SHROOM4-201ENST00000289292 ZNF428Q96B54 188 aa18.54■□□□□ 0.56
SHROOM4-201ENST00000289292 GAPVD1Q14C86 1478 aa18.54■□□□□ 0.56
SHROOM4-201ENST00000289292 G3BP1Q13283 466 aaKnown RBP eCLIP18.54■□□□□ 0.56
SHROOM4-201ENST00000289292 PTPRGP23470 1445 aa18.53■□□□□ 0.56
SHROOM4-201ENST00000289292 SYNE3Q6ZMZ3 975 aa18.53■□□□□ 0.56
SHROOM4-201ENST00000289292 RNF20Q5VTR2 975 aa18.53■□□□□ 0.56
SHROOM4-201ENST00000289292 AIMP1Q12904 312 aaKnown RBP18.53■□□□□ 0.56
SHROOM4-201ENST00000289292 NEXNQ0ZGT2 675 aa18.52■□□□□ 0.56
SHROOM4-201ENST00000289292 MAP4K4O95819 1239 aaPredicted RBP18.52■□□□□ 0.56
SHROOM4-201ENST00000289292 NUTM2GQ5VZR2 741 aa18.52■□□□□ 0.56
SHROOM4-201ENST00000289292 MNS1Q8NEH6 495 aa18.52■□□□□ 0.55
SHROOM4-201ENST00000289292 NFXL1Q6ZNB6 911 aa18.51■□□□□ 0.55
SHROOM4-201ENST00000289292 CFAP70Q5T0N1 1121 aa18.51■□□□□ 0.55
SHROOM4-201ENST00000289292 FIBPO43427 364 aa18.51■□□□□ 0.55
SHROOM4-201ENST00000289292 CCDC73Q6ZRK6 1079 aa18.51■□□□□ 0.55
SHROOM4-201ENST00000289292 PDILTQ8N807 584 aa18.51■□□□□ 0.55
SHROOM4-201ENST00000289292 TRIM5Q9C035 493 aa18.5■□□□□ 0.55
SHROOM4-201ENST00000289292 CEBPZQ03701 1054 aaKnown RBP18.5■□□□□ 0.55
SHROOM4-201ENST00000289292 C20orf194Q5TEA3 1177 aa18.49■□□□□ 0.55
SHROOM4-201ENST00000289292 MAP7D2Q96T17 732 aa18.49■□□□□ 0.55
SHROOM4-201ENST00000289292 TTLL5Q6EMB2 1281 aa18.49■□□□□ 0.55
SHROOM4-201ENST00000289292 TTC5Q8N0Z6 440 aa18.49■□□□□ 0.55
SHROOM4-201ENST00000289292 UBTFL1P0CB47 393 aaPredicted RBP18.48■□□□□ 0.55
SHROOM4-201ENST00000289292 CCDC70Q6NSX1 233 aa18.48■□□□□ 0.55
SHROOM4-201ENST00000289292 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.48■□□□□ 0.55
SHROOM4-201ENST00000289292 GTF2E1P29083 439 aaPredicted RBP18.48■□□□□ 0.55
SHROOM4-201ENST00000289292 PRKAR2BP31323 418 aa18.48■□□□□ 0.55
SHROOM4-201ENST00000289292 AAMPQ13685 434 aa18.48■□□□□ 0.55
SHROOM4-201ENST00000289292 PDE3AQ14432 1141 aa18.47■□□□□ 0.55
SHROOM4-201ENST00000289292 UQCRHLA0A096LP55 91 aa18.47■□□□□ 0.55
SHROOM4-201ENST00000289292 K7ELQ4 463 aaPredicted RBP18.47■□□□□ 0.55
SHROOM4-201ENST00000289292 ERC2O15083 957 aa18.47■□□□□ 0.55
SHROOM4-201ENST00000289292 UQCRHP07919 91 aa18.47■□□□□ 0.55
SHROOM4-201ENST00000289292 NEUROD6Q96NK8 337 aa18.47■□□□□ 0.55
SHROOM4-201ENST00000289292 RAD21O60216 631 aa18.47■□□□□ 0.55
SHROOM4-201ENST00000289292 MTERF4Q7Z6M4 381 aaKnown RBP18.46■□□□□ 0.55
SHROOM4-201ENST00000289292 CEP89Q96ST8 783 aa18.46■□□□□ 0.55
SHROOM4-201ENST00000289292 CNTROBQ8N137 903 aa18.46■□□□□ 0.55
SHROOM4-201ENST00000289292 RABEP1Q15276 862 aa18.46■□□□□ 0.55
SHROOM4-201ENST00000289292 SMC2O95347 1197 aa18.45■□□□□ 0.54
SHROOM4-201ENST00000289292 PODXL2Q9NZ53 605 aa18.45■□□□□ 0.54
SHROOM4-201ENST00000289292 CPLX2Q6PUV4 134 aaKnown RBP18.45■□□□□ 0.54
SHROOM4-201ENST00000289292 NINLQ9Y2I6 1382 aa18.45■□□□□ 0.54
SHROOM4-201ENST00000289292 WWC1Q8IX03 1113 aa18.45■□□□□ 0.54
SHROOM4-201ENST00000289292 FMNL2Q96PY5 1086 aa18.45■□□□□ 0.54
SHROOM4-201ENST00000289292 C11orf95C9JLR9 678 aaPredicted RBP18.45■□□□□ 0.54
SHROOM4-201ENST00000289292 G3V3G9 751 aa18.45■□□□□ 0.54
SHROOM4-201ENST00000289292 DCAF8Q5TAQ9 597 aa18.45■□□□□ 0.54
SHROOM4-201ENST00000289292 TWISTNBQ3B726 338 aaPredicted RBP18.45■□□□□ 0.54
SHROOM4-201ENST00000289292 MCM4P33991 863 aa18.44■□□□□ 0.54
SHROOM4-201ENST00000289292 ERICH3Q5RHP9 1530 aa18.44■□□□□ 0.54
SHROOM4-201ENST00000289292 STK3Q13188 491 aa18.44■□□□□ 0.54
SHROOM4-201ENST00000289292 ARGLU1Q9NWB6 273 aaPredicted RBP18.44■□□□□ 0.54
SHROOM4-201ENST00000289292 SURF6O75683 361 aaKnown RBP18.44■□□□□ 0.54
SHROOM4-201ENST00000289292 TRDNQ13061 729 aa18.44■□□□□ 0.54
SHROOM4-201ENST00000289292 FSD1Q9BTV5 496 aa18.44■□□□□ 0.54
SHROOM4-201ENST00000289292 TIAM1Q13009 1591 aa18.43■□□□□ 0.54
SHROOM4-201ENST00000289292 CHMP4CQ96CF2 233 aa18.43■□□□□ 0.54
SHROOM4-201ENST00000289292 MVPQ14764 893 aaKnown RBP18.43■□□□□ 0.54
SHROOM4-201ENST00000289292 SLC12A5Q9H2X9 1139 aa18.43■□□□□ 0.54
SHROOM4-201ENST00000289292 MBD3O95983 291 aa18.43■□□□□ 0.54
SHROOM4-201ENST00000289292 WASHC4Q2M389 1173 aa18.43■□□□□ 0.54
SHROOM4-201ENST00000289292 RIC3Q7Z5B4 369 aa18.43■□□□□ 0.54
SHROOM4-201ENST00000289292 DNAJC2Q99543 621 aaKnown RBP18.42■□□□□ 0.54
SHROOM4-201ENST00000289292 SDF4Q9BRK5 362 aa18.42■□□□□ 0.54
SHROOM4-201ENST00000289292 DDX58O95786 925 aaKnown RBP18.42■□□□□ 0.54
SHROOM4-201ENST00000289292 HOOK1Q9UJC3 728 aaKnown RBP18.42■□□□□ 0.54
SHROOM4-201ENST00000289292 CHD1LQ86WJ1 897 aa18.41■□□□□ 0.54
SHROOM4-201ENST00000289292 GCC1Q96CN9 775 aa18.41■□□□□ 0.54
SHROOM4-201ENST00000289292 ARHGAP5Q13017 1502 aa18.41■□□□□ 0.54
SHROOM4-201ENST00000289292 NAP1L1P55209 391 aaKnown RBP18.41■□□□□ 0.54
SHROOM4-201ENST00000289292 ERBINQ96RT1 1412 aa18.41■□□□□ 0.54
SHROOM4-201ENST00000289292 IPO7O95373 1038 aaKnown RBP18.41■□□□□ 0.54
SHROOM4-201ENST00000289292 AQRO60306 1485 aaKnown RBP eCLIP18.41■□□□□ 0.54
SHROOM4-201ENST00000289292 LETM1O95202 739 aaPredicted RBP18.41■□□□□ 0.54
SHROOM4-201ENST00000289292 KIAA1107Q9UPP5 1409 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms