RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 RIPK4P57078 832 aa21.29■■□□□ 1
PCDHA13-201ENST00000289272 NOC3LQ8WTT2 800 aaKnown RBP21.29■■□□□ 1
PCDHA13-201ENST00000289272 AFAP1Q8N556 730 aa21.28■■□□□ 1
PCDHA13-201ENST00000289272 RUFY2Q8WXA3 655 aa21.28■■□□□ 1
PCDHA13-201ENST00000289272 TULP1O00294 542 aaPredicted RBP21.28■■□□□ 1
PCDHA13-201ENST00000289272 C1orf141Q5JVX7 400 aa21.28■■□□□ 1
PCDHA13-201ENST00000289272 TAF7LQ5H9L4 462 aa21.28■■□□□ 1
PCDHA13-201ENST00000289272 GRPEL1Q9HAV7 217 aa21.28■■□□□ 1
PCDHA13-201ENST00000289272 IQGAP2Q13576 1575 aa21.27■■□□□ 1
PCDHA13-201ENST00000289272 GORABQ5T7V8 394 aa21.27■■□□□ 1
PCDHA13-201ENST00000289272 PTPN23Q9H3S7 1636 aa21.27■■□□□ 1
PCDHA13-201ENST00000289272 TPM1P09493 284 aa21.27■■□□□ 1
PCDHA13-201ENST00000289272 CCDC184Q52MB2 194 aa21.27■■□□□ 1
PCDHA13-201ENST00000289272 HSP90B1P14625 803 aaKnown RBP21.27■□□□□ 0.99
PCDHA13-201ENST00000289272 CWC22Q9HCG8 908 aaKnown RBP21.26■□□□□ 0.99
PCDHA13-201ENST00000289272 NUTM2FA1L443 756 aa21.26■□□□□ 0.99
PCDHA13-201ENST00000289272 CDC45O75419 566 aa21.26■□□□□ 0.99
PCDHA13-201ENST00000289272 AKNAQ7Z591 1439 aa21.26■□□□□ 0.99
PCDHA13-201ENST00000289272 ESPNB1AK53 854 aa21.26■□□□□ 0.99
PCDHA13-201ENST00000289272 MSH5O43196 834 aa21.26■□□□□ 0.99
PCDHA13-201ENST00000289272 ZNF330Q9Y3S2 320 aaPredicted RBP21.26■□□□□ 0.99
PCDHA13-201ENST00000289272 CFAP70Q5T0N1 1121 aa21.25■□□□□ 0.99
PCDHA13-201ENST00000289272 TAOK2Q9UL54 1235 aa21.25■□□□□ 0.99
PCDHA13-201ENST00000289272 CALRP27797 417 aaKnown RBP21.25■□□□□ 0.99
PCDHA13-201ENST00000289272 CAVIN1Q6NZI2 390 aaKnown RBP21.24■□□□□ 0.99
PCDHA13-201ENST00000289272 MCTP1Q6DN14 999 aa21.24■□□□□ 0.99
PCDHA13-201ENST00000289272 CCP110O43303 1012 aa21.24■□□□□ 0.99
PCDHA13-201ENST00000289272 ANKRD30BQ9BXX2 1392 aa21.23■□□□□ 0.99
PCDHA13-201ENST00000289272 SF3A1Q15459 793 aaKnown RBP21.23■□□□□ 0.99
PCDHA13-201ENST00000289272 RABEP1Q15276 862 aa21.23■□□□□ 0.99
PCDHA13-201ENST00000289272 LTV1Q96GA3 475 aaPredicted RBP21.23■□□□□ 0.99
PCDHA13-201ENST00000289272 H3BQV1 296 aa21.22■□□□□ 0.99
PCDHA13-201ENST00000289272 IFFO2Q5TF58 517 aa21.22■□□□□ 0.99
PCDHA13-201ENST00000289272 SCAPERQ9BY12 1400 aa21.22■□□□□ 0.99
PCDHA13-201ENST00000289272 PDCL2Q8N4E4 241 aa21.22■□□□□ 0.99
PCDHA13-201ENST00000289272 TSPY26PQ9H489 355 aa21.21■□□□□ 0.99
PCDHA13-201ENST00000289272 PANK1Q8TE04 598 aa21.21■□□□□ 0.99
PCDHA13-201ENST00000289272 ERBINQ96RT1 1412 aa21.2■□□□□ 0.98
PCDHA13-201ENST00000289272 CT47B1P0C2W7 299 aaPredicted RBP21.2■□□□□ 0.98
PCDHA13-201ENST00000289272 TEFQ10587 303 aa21.2■□□□□ 0.98
PCDHA13-201ENST00000289272 MTHFSP49914 203 aa21.19■□□□□ 0.98
PCDHA13-201ENST00000289272 TSR1Q2NL82 804 aaKnown RBP21.19■□□□□ 0.98
PCDHA13-201ENST00000289272 TMEM132EQ6IEE7 984 aa21.19■□□□□ 0.98
PCDHA13-201ENST00000289272 PDCL3Q9H2J4 239 aa21.19■□□□□ 0.98
PCDHA13-201ENST00000289272 SASS6Q6UVJ0 657 aa21.19■□□□□ 0.98
PCDHA13-201ENST00000289272 PODXL2Q9NZ53 605 aa21.19■□□□□ 0.98
PCDHA13-201ENST00000289272 ZKSCAN1P17029 563 aaPredicted RBP21.19■□□□□ 0.98
PCDHA13-201ENST00000289272 TCP11L2Q8N4U5 519 aa21.19■□□□□ 0.98
PCDHA13-201ENST00000289272 FAM184AQ8NB25 1140 aa21.18■□□□□ 0.98
PCDHA13-201ENST00000289272 ZSCAN30Q86W11 494 aa21.18■□□□□ 0.98
PCDHA13-201ENST00000289272 ABCC5O15440 1437 aa21.18■□□□□ 0.98
PCDHA13-201ENST00000289272 MCM4P33991 863 aa21.18■□□□□ 0.98
PCDHA13-201ENST00000289272 GGNBP2Q9H3C7 697 aa21.18■□□□□ 0.98
PCDHA13-201ENST00000289272 CHMP3Q9Y3E7 222 aa21.18■□□□□ 0.98
PCDHA13-201ENST00000289272 GNAI1P63096 354 aa21.18■□□□□ 0.98
PCDHA13-201ENST00000289272 ZNF592Q92610 1267 aa21.17■□□□□ 0.98
PCDHA13-201ENST00000289272 IFT57Q9NWB7 429 aa21.17■□□□□ 0.98
PCDHA13-201ENST00000289272 MNS1Q8NEH6 495 aa21.17■□□□□ 0.98
PCDHA13-201ENST00000289272 CABP2Q9NPB3 220 aa21.17■□□□□ 0.98
PCDHA13-201ENST00000289272 ERCC4Q92889 916 aaPredicted RBP21.17■□□□□ 0.98
PCDHA13-201ENST00000289272 HOOK1Q9UJC3 728 aaKnown RBP21.17■□□□□ 0.98
PCDHA13-201ENST00000289272 EVA1CP58658 441 aa21.16■□□□□ 0.98
PCDHA13-201ENST00000289272 PSME1Q06323 249 aa21.16■□□□□ 0.98
PCDHA13-201ENST00000289272 NAT10Q9H0A0 1025 aaKnown RBP21.16■□□□□ 0.98
PCDHA13-201ENST00000289272 TSPYL1Q9H0U9 437 aa21.16■□□□□ 0.98
PCDHA13-201ENST00000289272 CAMSAP2Q08AD1 1489 aa21.15■□□□□ 0.98
PCDHA13-201ENST00000289272 NOL8Q76FK4 1167 aaKnown RBP21.15■□□□□ 0.98
PCDHA13-201ENST00000289272 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.15■□□□□ 0.98
PCDHA13-201ENST00000289272 FOXD4L5Q5VV16 416 aaPredicted RBP21.14■□□□□ 0.98
PCDHA13-201ENST00000289272 FOXD4L4Q8WXT5 416 aaPredicted RBP21.14■□□□□ 0.98
PCDHA13-201ENST00000289272 RNF20Q5VTR2 975 aa21.14■□□□□ 0.97
PCDHA13-201ENST00000289272 HSP90B2PQ58FF3 399 aa21.14■□□□□ 0.97
PCDHA13-201ENST00000289272 HOMER1Q86YM7 354 aa21.14■□□□□ 0.97
PCDHA13-201ENST00000289272 GCC1Q96CN9 775 aa21.14■□□□□ 0.97
PCDHA13-201ENST00000289272 SMC3Q9UQE7 1217 aa21.14■□□□□ 0.97
PCDHA13-201ENST00000289272 TTC5Q8N0Z6 440 aa21.13■□□□□ 0.97
PCDHA13-201ENST00000289272 UNC13AQ9UPW8 1703 aa21.13■□□□□ 0.97
PCDHA13-201ENST00000289272 NEXNQ0ZGT2 675 aa21.13■□□□□ 0.97
PCDHA13-201ENST00000289272 C11orf95C9JLR9 678 aaPredicted RBP21.12■□□□□ 0.97
PCDHA13-201ENST00000289272 PDIA4P13667 645 aaKnown RBP21.12■□□□□ 0.97
PCDHA13-201ENST00000289272 LRRFIP1Q32MZ4 808 aaKnown RBP21.12■□□□□ 0.97
PCDHA13-201ENST00000289272 RILPL2Q969X0 211 aa21.12■□□□□ 0.97
PCDHA13-201ENST00000289272 AK7Q96M32 723 aa21.12■□□□□ 0.97
PCDHA13-201ENST00000289272 SLC52A1Q9NWF4 448 aa21.11■□□□□ 0.97
PCDHA13-201ENST00000289272 UQCRHLA0A096LP55 91 aa21.11■□□□□ 0.97
PCDHA13-201ENST00000289272 UQCRHP07919 91 aa21.11■□□□□ 0.97
PCDHA13-201ENST00000289272 GTF2E1P29083 439 aaPredicted RBP21.11■□□□□ 0.97
PCDHA13-201ENST00000289272 ATF3P18847 181 aa21.11■□□□□ 0.97
PCDHA13-201ENST00000289272 MCM5P33992 734 aa21.11■□□□□ 0.97
PCDHA13-201ENST00000289272 CCDC141Q6ZP82 1450 aa21.1■□□□□ 0.97
PCDHA13-201ENST00000289272 MAGI1Q96QZ7 1491 aaPredicted RBP21.1■□□□□ 0.97
PCDHA13-201ENST00000289272 CDR1P51861 262 aa21.1■□□□□ 0.97
PCDHA13-201ENST00000289272 NCOA1Q15788 1441 aa21.09■□□□□ 0.97
PCDHA13-201ENST00000289272 ANKRD20A12PQ8NF67 263 aa21.09■□□□□ 0.97
PCDHA13-201ENST00000289272 HSP90AB4PQ58FF6 505 aa21.09■□□□□ 0.97
PCDHA13-201ENST00000289272 LNPKQ9C0E8 428 aa21.09■□□□□ 0.97
PCDHA13-201ENST00000289272 DDX58O95786 925 aaKnown RBP21.08■□□□□ 0.97
PCDHA13-201ENST00000289272 HMOX1P09601 288 aa21.08■□□□□ 0.97
PCDHA13-201ENST00000289272 RPGRIP1LQ68CZ1 1315 aa21.08■□□□□ 0.97
PCDHA13-201ENST00000289272 RPRD2Q5VT52 1461 aaKnown RBP21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms