RNA–Protein interactions for RNA: ENST00000289228.6

ACTR1B-201, Transcript of ARP1 actin related protein 1 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR1B, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1B-201ENST00000289228 TMEM132EQ6IEE7 984 aa29.32■■■□□ 2.28
ACTR1B-201ENST00000289228 CD109Q6YHK3 1445 aa29.32■■■□□ 2.28
ACTR1B-201ENST00000289228 NEFMP07197 916 aa29.32■■■□□ 2.28
ACTR1B-201ENST00000289228 TNNT2P45379 298 aaPredicted RBP29.32■■■□□ 2.28
ACTR1B-201ENST00000289228 USP35Q9P2H5 1018 aa29.32■■■□□ 2.28
ACTR1B-201ENST00000289228 HECW2Q9P2P5 1572 aa29.3■■■□□ 2.28
ACTR1B-201ENST00000289228 RGS3P49796 1198 aa29.3■■■□□ 2.28
ACTR1B-201ENST00000289228 PDE3AQ14432 1141 aa29.3■■■□□ 2.28
ACTR1B-201ENST00000289228 RUNDC1Q96C34 613 aa29.29■■■□□ 2.28
ACTR1B-201ENST00000289228 NINLQ9Y2I6 1382 aa29.29■■■□□ 2.28
ACTR1B-201ENST00000289228 CGNL1Q0VF96 1302 aa29.29■■■□□ 2.28
ACTR1B-201ENST00000289228 USP32Q8NFA0 1604 aa29.28■■■□□ 2.28
ACTR1B-201ENST00000289228 ABCC3O15438 1527 aa29.27■■■□□ 2.28
ACTR1B-201ENST00000289228 CANXP27824 592 aaKnown RBP29.26■■■□□ 2.27
ACTR1B-201ENST00000289228 NEUROD2Q15784 382 aa29.25■■■□□ 2.27
ACTR1B-201ENST00000289228 IQSEC2Q5JU85 1478 aa29.24■■■□□ 2.27
ACTR1B-201ENST00000289228 TCP11L2Q8N4U5 519 aa29.23■■■□□ 2.27
ACTR1B-201ENST00000289228 RRP7AQ9Y3A4 280 aaKnown RBP29.23■■■□□ 2.27
ACTR1B-201ENST00000289228 IGHDP01880 384 aa29.22■■■□□ 2.27
ACTR1B-201ENST00000289228 GLI2P10070 1586 aa29.22■■■□□ 2.27
ACTR1B-201ENST00000289228 CAMSAP1Q5T5Y3 1602 aa29.22■■■□□ 2.27
ACTR1B-201ENST00000289228 MTHFSP49914 203 aa29.22■■■□□ 2.27
ACTR1B-201ENST00000289228 CFAP53Q96M91 514 aa29.21■■■□□ 2.27
ACTR1B-201ENST00000289228 DAXXQ9UER7 740 aaPredicted RBP29.21■■■□□ 2.27
ACTR1B-201ENST00000289228 EVC2Q86UK5 1308 aa29.2■■■□□ 2.27
ACTR1B-201ENST00000289228 PANK1Q8TE04 598 aa29.2■■■□□ 2.27
ACTR1B-201ENST00000289228 CLUAP1Q96AJ1 413 aa29.2■■■□□ 2.27
ACTR1B-201ENST00000289228 PUS7Q96PZ0 661 aaKnown RBP29.2■■■□□ 2.27
ACTR1B-201ENST00000289228 COG6Q9Y2V7 657 aa29.2■■■□□ 2.26
ACTR1B-201ENST00000289228 PHF23Q9BUL5 403 aaPredicted RBP29.19■■■□□ 2.26
ACTR1B-201ENST00000289228 WDR63Q8IWG1 891 aa29.18■■■□□ 2.26
ACTR1B-201ENST00000289228 SIGLEC1Q9BZZ2 1709 aa29.18■■■□□ 2.26
ACTR1B-201ENST00000289228 VGFO15240 615 aaPredicted RBP29.18■■■□□ 2.26
ACTR1B-201ENST00000289228 SLC4A3P48751 1232 aa29.17■■■□□ 2.26
ACTR1B-201ENST00000289228 NUTM2DQ5VT03 806 aaPredicted RBP29.17■■■□□ 2.26
ACTR1B-201ENST00000289228 FRAT1Q92837 279 aaPredicted RBP29.17■■■□□ 2.26
ACTR1B-201ENST00000289228 ARHGEF28Q8N1W1 1705 aaKnown RBP29.17■■■□□ 2.26
ACTR1B-201ENST00000289228 RARSP54136 660 aaKnown RBP29.17■■■□□ 2.26
ACTR1B-201ENST00000289228 PIK3C2BO00750 1634 aa29.17■■■□□ 2.26
ACTR1B-201ENST00000289228 TULP4Q9NRJ4 1543 aa29.16■■■□□ 2.26
ACTR1B-201ENST00000289228 ANKRD36BQ8N2N9 1353 aa29.16■■■□□ 2.26
ACTR1B-201ENST00000289228 NEXMIFQ5QGS0 1516 aa29.15■■■□□ 2.26
ACTR1B-201ENST00000289228 NSD2O96028 1365 aa29.15■■■□□ 2.26
ACTR1B-201ENST00000289228 CCDC27Q2M243 656 aa29.14■■■□□ 2.26
ACTR1B-201ENST00000289228 VIRMAQ69YN4 1812 aaKnown RBP29.1■■■□□ 2.25
ACTR1B-201ENST00000289228 MAPK8IP3Q9UPT6 1336 aa29.1■■■□□ 2.25
ACTR1B-201ENST00000289228 RAPGEF3O95398 923 aa29.09■■■□□ 2.25
ACTR1B-201ENST00000289228 CABP2Q9NPB3 220 aa29.09■■■□□ 2.25
ACTR1B-201ENST00000289228 AAMPQ13685 434 aa29.08■■■□□ 2.25
ACTR1B-201ENST00000289228 NEO1Q92859 1461 aa29.08■■■□□ 2.25
ACTR1B-201ENST00000289228 NCBP3Q53F19 620 aaKnown RBP29.08■■■□□ 2.25
ACTR1B-201ENST00000289228 U2AF1L5P0DN76 240 aaPredicted RBP29.07■■■□□ 2.24
ACTR1B-201ENST00000289228 U2AF1Q01081 240 aaKnown RBP eCLIP29.07■■■□□ 2.24
ACTR1B-201ENST00000289228 OSCARQ8IYS5 282 aa29.06■■■□□ 2.24
ACTR1B-201ENST00000289228 PMFBP1Q8TBY8 1022 aa29.06■■■□□ 2.24
ACTR1B-201ENST00000289228 MYH16Q9H6N6 1097 aa29.06■■■□□ 2.24
ACTR1B-201ENST00000289228 DIP2CQ9Y2E4 1556 aa29.06■■■□□ 2.24
ACTR1B-201ENST00000289228 NFKBIBQ15653 356 aa29.05■■■□□ 2.24
ACTR1B-201ENST00000289228 ARHGAP31Q2M1Z3 1444 aa29.05■■■□□ 2.24
ACTR1B-201ENST00000289228 SAFB2Q14151 953 aaKnown RBP eCLIP29.04■■■□□ 2.24
ACTR1B-201ENST00000289228 BCL2L13Q9BXK5 485 aa29.04■■■□□ 2.24
ACTR1B-201ENST00000289228 RLBP1P12271 317 aa29.03■■■□□ 2.24
ACTR1B-201ENST00000289228 IDI1Q13907 227 aa29.03■■■□□ 2.24
ACTR1B-201ENST00000289228 TNNQ9UQP3 1299 aa29.02■■■□□ 2.24
ACTR1B-201ENST00000289228 ADGRB2O60241 1585 aa29.02■■■□□ 2.24
ACTR1B-201ENST00000289228 ZFYVE9O95405 1425 aa29.01■■■□□ 2.23
ACTR1B-201ENST00000289228 A0A1W2PP64 1363 aa29■■■□□ 2.23
ACTR1B-201ENST00000289228 ABCC11Q96J66 1382 aa29■■■□□ 2.23
ACTR1B-201ENST00000289228 STK26Q9P289 416 aa29■■■□□ 2.23
ACTR1B-201ENST00000289228 PCDHB15Q9Y5E8 787 aa29■■■□□ 2.23
ACTR1B-201ENST00000289228 SRPK2P78362 688 aaKnown RBP28.98■■■□□ 2.23
ACTR1B-201ENST00000289228 USP19O94966 1318 aa28.98■■■□□ 2.23
ACTR1B-201ENST00000289228 SLC52A1Q9NWF4 448 aa28.98■■■□□ 2.23
ACTR1B-201ENST00000289228 SEC24BO95487 1268 aa28.94■■■□□ 2.22
ACTR1B-201ENST00000289228 GGNBP2Q9H3C7 697 aa28.94■■■□□ 2.22
ACTR1B-201ENST00000289228 SENP3Q9H4L4 574 aaPredicted RBP28.94■■■□□ 2.22
ACTR1B-201ENST00000289228 RWDD1Q9H446 243 aaPredicted RBP28.93■■■□□ 2.22
ACTR1B-201ENST00000289228 MYO5BQ9ULV0 1848 aa28.93■■■□□ 2.22
ACTR1B-201ENST00000289228 U2SURPO15042 1029 aaKnown RBP28.93■■■□□ 2.22
ACTR1B-201ENST00000289228 RICTORQ6R327 1708 aa28.92■■■□□ 2.22
ACTR1B-201ENST00000289228 CT47B1P0C2W7 299 aaPredicted RBP28.92■■■□□ 2.22
ACTR1B-201ENST00000289228 ZKSCAN2Q63HK3 967 aa28.92■■■□□ 2.22
ACTR1B-201ENST00000289228 PLEKHF1Q96S99 279 aa28.92■■■□□ 2.22
ACTR1B-201ENST00000289228 PTPRMP28827 1452 aa28.91■■■□□ 2.22
ACTR1B-201ENST00000289228 ATAD2Q6PL18 1390 aa28.91■■■□□ 2.22
ACTR1B-201ENST00000289228 MVPQ14764 893 aaKnown RBP28.91■■■□□ 2.22
ACTR1B-201ENST00000289228 PDZRN3Q9UPQ7 1066 aa28.91■■■□□ 2.22
ACTR1B-201ENST00000289228 GSE1Q14687 1217 aa28.9■■■□□ 2.22
ACTR1B-201ENST00000289228 ZMYM3Q14202 1370 aa28.9■■■□□ 2.22
ACTR1B-201ENST00000289228 TSR2Q969E8 191 aaKnown RBP28.9■■■□□ 2.22
ACTR1B-201ENST00000289228 TERF2IPQ9NYB0 399 aa28.9■■■□□ 2.22
ACTR1B-201ENST00000289228 COL3A1P02461 1466 aaPredicted RBP28.9■■■□□ 2.22
ACTR1B-201ENST00000289228 TMEM131LA2VDJ0 1609 aa28.89■■■□□ 2.22
ACTR1B-201ENST00000289228 MINK1Q8N4C8 1332 aaPredicted RBP28.89■■■□□ 2.22
ACTR1B-201ENST00000289228 TMPOP42166 694 aaKnown RBP28.89■■■□□ 2.21
ACTR1B-201ENST00000289228 PREX1Q8TCU6 1659 aa28.88■■■□□ 2.21
ACTR1B-201ENST00000289228 YEATS2Q9ULM3 1422 aa28.88■■■□□ 2.21
ACTR1B-201ENST00000289228 PRAM1Q96QH2 718 aa28.88■■■□□ 2.21
ACTR1B-201ENST00000289228 ANKRD26Q9UPS8 1709 aa28.88■■■□□ 2.21
ACTR1B-201ENST00000289228 FTSJ3Q8IY81 847 aaKnown RBP28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms