RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 NCLP19338 710 aaKnown RBP20.09■□□□□ 0.81
SMAD6-201ENST00000288840 FBXO31Q5XUX0 539 aaPredicted RBP20.09■□□□□ 0.81
SMAD6-201ENST00000288840 CFAP65Q6ZU64 1925 aaKnown RBP20.09■□□□□ 0.81
SMAD6-201ENST00000288840 HSCBQ8IWL3 235 aa20.09■□□□□ 0.81
SMAD6-201ENST00000288840 SEC24BO95487 1268 aa20.08■□□□□ 0.81
SMAD6-201ENST00000288840 NOB1Q9ULX3 412 aaKnown RBP20.08■□□□□ 0.8
SMAD6-201ENST00000288840 PCDHB15Q9Y5E8 787 aa20.08■□□□□ 0.8
SMAD6-201ENST00000288840 DUOX2Q9NRD8 1548 aa20.07■□□□□ 0.8
SMAD6-201ENST00000288840 PRKAR2BP31323 418 aa20.07■□□□□ 0.8
SMAD6-201ENST00000288840 C8orf34Q49A92 452 aa20.07■□□□□ 0.8
SMAD6-201ENST00000288840 WAPLQ7Z5K2 1190 aa20.07■□□□□ 0.8
SMAD6-201ENST00000288840 NKTRP30414 1462 aaKnown RBP20.06■□□□□ 0.8
SMAD6-201ENST00000288840 GPRASP1Q5JY77 1395 aa20.06■□□□□ 0.8
SMAD6-201ENST00000288840 CDC42BPAQ5VT25 1732 aa20.06■□□□□ 0.8
SMAD6-201ENST00000288840 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.05■□□□□ 0.8
SMAD6-201ENST00000288840 ERCC6L2Q5T890 1561 aa20.04■□□□□ 0.8
SMAD6-201ENST00000288840 PNNQ9H307 717 aaKnown RBP20.04■□□□□ 0.8
SMAD6-201ENST00000288840 SLC4A10Q6U841 1118 aa20.03■□□□□ 0.8
SMAD6-201ENST00000288840 CDK19Q9BWU1 502 aa20.03■□□□□ 0.8
SMAD6-201ENST00000288840 SSH1Q8WYL5 1049 aa20.03■□□□□ 0.8
SMAD6-201ENST00000288840 FAM69CQ0P6D2 419 aa20.02■□□□□ 0.8
SMAD6-201ENST00000288840 TTC37Q6PGP7 1564 aa20.02■□□□□ 0.8
SMAD6-201ENST00000288840 ASXL1Q8IXJ9 1541 aa20.02■□□□□ 0.8
SMAD6-201ENST00000288840 TMPOP42166 694 aaKnown RBP20.02■□□□□ 0.79
SMAD6-201ENST00000288840 C14orf93Q9H972 538 aaKnown RBP20.01■□□□□ 0.79
SMAD6-201ENST00000288840 TXNDC2Q86VQ3 553 aa20.01■□□□□ 0.79
SMAD6-201ENST00000288840 DDX19BQ9UMR2 479 aa20.01■□□□□ 0.79
SMAD6-201ENST00000288840 NGEFQ8N5V2 710 aa20■□□□□ 0.79
SMAD6-201ENST00000288840 ANO8Q9HCE9 1232 aaPredicted RBP20■□□□□ 0.79
SMAD6-201ENST00000288840 MVPQ14764 893 aaKnown RBP19.99■□□□□ 0.79
SMAD6-201ENST00000288840 RRS1Q15050 365 aaKnown RBP19.99■□□□□ 0.79
SMAD6-201ENST00000288840 NECTIN2Q92692 538 aa19.99■□□□□ 0.79
SMAD6-201ENST00000288840 KDM5DQ9BY66 1539 aa19.99■□□□□ 0.79
SMAD6-201ENST00000288840 TMEM57Q8N5G2 664 aa19.99■□□□□ 0.79
SMAD6-201ENST00000288840 C22orf23Q9BZE7 217 aa19.99■□□□□ 0.79
SMAD6-201ENST00000288840 WDR63Q8IWG1 891 aa19.99■□□□□ 0.79
SMAD6-201ENST00000288840 LTV1Q96GA3 475 aaPredicted RBP19.99■□□□□ 0.79
SMAD6-201ENST00000288840 UGGT1Q9NYU2 1555 aa19.98■□□□□ 0.79
SMAD6-201ENST00000288840 DCTN1Q14203 1278 aa19.98■□□□□ 0.79
SMAD6-201ENST00000288840 LMOD2Q6P5Q4 547 aa19.97■□□□□ 0.79
SMAD6-201ENST00000288840 KDM2BQ8NHM5 1336 aa19.97■□□□□ 0.79
SMAD6-201ENST00000288840 CD109Q6YHK3 1445 aa19.96■□□□□ 0.79
SMAD6-201ENST00000288840 BLMP54132 1417 aaPredicted RBP19.96■□□□□ 0.79
SMAD6-201ENST00000288840 ATF7IPQ6VMQ6 1270 aa19.96■□□□□ 0.79
SMAD6-201ENST00000288840 TRIM27P14373 513 aa19.95■□□□□ 0.78
SMAD6-201ENST00000288840 ABCC2Q92887 1545 aa19.95■□□□□ 0.78
SMAD6-201ENST00000288840 COG3Q96JB2 828 aa19.95■□□□□ 0.78
SMAD6-201ENST00000288840 WDR7Q9Y4E6 1490 aa19.94■□□□□ 0.78
SMAD6-201ENST00000288840 FOXD4L5Q5VV16 416 aaPredicted RBP19.94■□□□□ 0.78
SMAD6-201ENST00000288840 FOXD4L4Q8WXT5 416 aaPredicted RBP19.94■□□□□ 0.78
SMAD6-201ENST00000288840 NOL8Q76FK4 1167 aaKnown RBP19.93■□□□□ 0.78
SMAD6-201ENST00000288840 EMILIN1Q9Y6C2 1016 aa19.93■□□□□ 0.78
SMAD6-201ENST00000288840 ARHGEF5Q12774 1597 aa19.93■□□□□ 0.78
SMAD6-201ENST00000288840 NUTM2GQ5VZR2 741 aa19.92■□□□□ 0.78
SMAD6-201ENST00000288840 ASXL2Q76L83 1435 aa19.92■□□□□ 0.78
SMAD6-201ENST00000288840 ZMYM4Q5VZL5 1548 aa19.92■□□□□ 0.78
SMAD6-201ENST00000288840 ATP10AO60312 1499 aa19.91■□□□□ 0.78
SMAD6-201ENST00000288840 FYB1O15117 783 aa19.9■□□□□ 0.78
SMAD6-201ENST00000288840 ZRANB1Q9UGI0 708 aa19.9■□□□□ 0.78
SMAD6-201ENST00000288840 RTF1Q92541 710 aaKnown RBP19.9■□□□□ 0.78
SMAD6-201ENST00000288840 MAST1Q9Y2H9 1570 aa19.9■□□□□ 0.78
SMAD6-201ENST00000288840 NME9Q86XW9 330 aa19.89■□□□□ 0.78
SMAD6-201ENST00000288840 ANP32BQ92688 251 aaKnown RBP19.89■□□□□ 0.77
SMAD6-201ENST00000288840 PIK3C2GO75747 1445 aa19.88■□□□□ 0.77
SMAD6-201ENST00000288840 ZNF521Q96K83 1311 aa19.88■□□□□ 0.77
SMAD6-201ENST00000288840 NCKAP5LQ9HCH0 1330 aa19.88■□□□□ 0.77
SMAD6-201ENST00000288840 TRIM44Q96DX7 344 aaPredicted RBP19.88■□□□□ 0.77
SMAD6-201ENST00000288840 FAM83GA6ND36 823 aa19.88■□□□□ 0.77
SMAD6-201ENST00000288840 KIF16BQ96L93 1317 aa19.87■□□□□ 0.77
SMAD6-201ENST00000288840 NGDNQ8NEJ9 315 aaKnown RBP19.87■□□□□ 0.77
SMAD6-201ENST00000288840 TBC1D2Q9BYX2 928 aa19.87■□□□□ 0.77
SMAD6-201ENST00000288840 MIS18AQ9NYP9 233 aa19.87■□□□□ 0.77
SMAD6-201ENST00000288840 GOLGA6L3A6NEY3 463 aa19.86■□□□□ 0.77
SMAD6-201ENST00000288840 CALD1Q05682 793 aaKnown RBP19.86■□□□□ 0.77
SMAD6-201ENST00000288840 SLC52A1Q9NWF4 448 aa19.86■□□□□ 0.77
SMAD6-201ENST00000288840 FOXD4L6Q3SYB3 417 aaPredicted RBP19.86■□□□□ 0.77
SMAD6-201ENST00000288840 FOXD4L3Q6VB84 417 aaPredicted RBP19.86■□□□□ 0.77
SMAD6-201ENST00000288840 NAP1L5Q96NT1 182 aaPredicted RBP19.86■□□□□ 0.77
SMAD6-201ENST00000288840 EIF2AK4Q9P2K8 1649 aaKnown RBP19.85■□□□□ 0.77
SMAD6-201ENST00000288840 TWISTNBQ3B726 338 aaPredicted RBP19.85■□□□□ 0.77
SMAD6-201ENST00000288840 GOLGA6L22H0YM25 854 aa19.85■□□□□ 0.77
SMAD6-201ENST00000288840 SULT6B1Q6IMI4 303 aa19.84■□□□□ 0.77
SMAD6-201ENST00000288840 CDC42BPBQ9Y5S2 1711 aa19.84■□□□□ 0.77
SMAD6-201ENST00000288840 CHMP4BQ9H444 224 aaKnown RBP19.84■□□□□ 0.77
SMAD6-201ENST00000288840 RPGRIP1LQ68CZ1 1315 aa19.84■□□□□ 0.77
SMAD6-201ENST00000288840 PREX2Q70Z35 1606 aa19.84■□□□□ 0.77
SMAD6-201ENST00000288840 CROCC2H7BZ55 1655 aa19.84■□□□□ 0.77
SMAD6-201ENST00000288840 ADCY10Q96PN6 1610 aa19.84■□□□□ 0.77
SMAD6-201ENST00000288840 AMPHP49418 695 aa19.83■□□□□ 0.77
SMAD6-201ENST00000288840 POLR3AO14802 1390 aaPredicted RBP19.83■□□□□ 0.77
SMAD6-201ENST00000288840 TRPM1Q7Z4N2 1603 aa19.82■□□□□ 0.76
SMAD6-201ENST00000288840 ZNF428Q96B54 188 aa19.82■□□□□ 0.76
SMAD6-201ENST00000288840 CASC1Q6TDU7 716 aa19.82■□□□□ 0.76
SMAD6-201ENST00000288840 SLC26A8Q96RN1 970 aa19.82■□□□□ 0.76
SMAD6-201ENST00000288840 PRDM15P57071 1507 aaPredicted RBP19.81■□□□□ 0.76
SMAD6-201ENST00000288840 GNAI1P63096 354 aa19.81■□□□□ 0.76
SMAD6-201ENST00000288840 L1TD1Q5T7N2 865 aaKnown RBP19.81■□□□□ 0.76
SMAD6-201ENST00000288840 PHACTR3Q96KR7 559 aa19.81■□□□□ 0.76
SMAD6-201ENST00000288840 TSPYL6Q8N831 410 aa19.8■□□□□ 0.76
SMAD6-201ENST00000288840 CHMP5Q9NZZ3 219 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms