RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 MORC1Q86VD1 984 aa17.07■□□□□ 0.32
SLC28A1-201ENST00000286749 FRAT1Q92837 279 aaPredicted RBP17.07■□□□□ 0.32
SLC28A1-201ENST00000286749 CFAP65Q6ZU64 1925 aaKnown RBP17.07■□□□□ 0.32
SLC28A1-201ENST00000286749 FRAT2O75474 233 aaPredicted RBP17.06■□□□□ 0.32
SLC28A1-201ENST00000286749 USP19O94966 1318 aa17.05■□□□□ 0.32
SLC28A1-201ENST00000286749 SETBP1Q9Y6X0 1596 aa17.05■□□□□ 0.32
SLC28A1-201ENST00000286749 CHGAP10645 457 aaKnown RBP17.05■□□□□ 0.32
SLC28A1-201ENST00000286749 KIDINS220Q9ULH0 1771 aa17.05■□□□□ 0.32
SLC28A1-201ENST00000286749 MAPK8IP3Q9UPT6 1336 aa17.05■□□□□ 0.32
SLC28A1-201ENST00000286749 BRPF3Q9ULD4 1205 aa17.04■□□□□ 0.32
SLC28A1-201ENST00000286749 TRAK1Q9UPV9 953 aa17.04■□□□□ 0.32
SLC28A1-201ENST00000286749 ADGRB3O60242 1522 aa17.04■□□□□ 0.32
SLC28A1-201ENST00000286749 RUNDC1Q96C34 613 aa17.04■□□□□ 0.32
SLC28A1-201ENST00000286749 SLC12A5Q9H2X9 1139 aa17.04■□□□□ 0.32
SLC28A1-201ENST00000286749 IQSEC2Q5JU85 1478 aa17.04■□□□□ 0.32
SLC28A1-201ENST00000286749 SEC24BO95487 1268 aa17.03■□□□□ 0.32
SLC28A1-201ENST00000286749 PPLO60437 1756 aa17.03■□□□□ 0.32
SLC28A1-201ENST00000286749 TCP11L2Q8N4U5 519 aa17.03■□□□□ 0.32
SLC28A1-201ENST00000286749 RARSP54136 660 aaKnown RBP17.02■□□□□ 0.32
SLC28A1-201ENST00000286749 DNAJC5Q9H3Z4 198 aa17.02■□□□□ 0.32
SLC28A1-201ENST00000286749 TNNQ9UQP3 1299 aa17.01■□□□□ 0.31
SLC28A1-201ENST00000286749 LMTK2Q8IWU2 1503 aa17■□□□□ 0.31
SLC28A1-201ENST00000286749 BCL2L13Q9BXK5 485 aa17■□□□□ 0.31
SLC28A1-201ENST00000286749 USP32Q8NFA0 1604 aa17■□□□□ 0.31
SLC28A1-201ENST00000286749 RLBP1P12271 317 aa17■□□□□ 0.31
SLC28A1-201ENST00000286749 TMEM132EQ6IEE7 984 aa16.99■□□□□ 0.31
SLC28A1-201ENST00000286749 PHF23Q9BUL5 403 aaPredicted RBP16.99■□□□□ 0.31
SLC28A1-201ENST00000286749 ADGRB1O14514 1584 aa16.99■□□□□ 0.31
SLC28A1-201ENST00000286749 MTHFSP49914 203 aa16.99■□□□□ 0.31
SLC28A1-201ENST00000286749 PCDHB15Q9Y5E8 787 aa16.99■□□□□ 0.31
SLC28A1-201ENST00000286749 ZNF518AQ6AHZ1 1483 aa16.98■□□□□ 0.31
SLC28A1-201ENST00000286749 NLRP1Q9C000 1473 aa16.98■□□□□ 0.31
SLC28A1-201ENST00000286749 PMFBP1Q8TBY8 1022 aa16.98■□□□□ 0.31
SLC28A1-201ENST00000286749 RIMBP3CA6NJZ7 1639 aa16.98■□□□□ 0.31
SLC28A1-201ENST00000286749 RIMBP3BA6NNM3 1639 aa16.98■□□□□ 0.31
SLC28A1-201ENST00000286749 RIMBP3Q9UFD9 1639 aa16.98■□□□□ 0.31
SLC28A1-201ENST00000286749 WDR63Q8IWG1 891 aa16.98■□□□□ 0.31
SLC28A1-201ENST00000286749 C14orf93Q9H972 538 aaKnown RBP16.98■□□□□ 0.31
SLC28A1-201ENST00000286749 ANO8Q9HCE9 1232 aaPredicted RBP16.96■□□□□ 0.31
SLC28A1-201ENST00000286749 CFAP53Q96M91 514 aa16.96■□□□□ 0.3
SLC28A1-201ENST00000286749 NPATQ14207 1427 aa16.95■□□□□ 0.3
SLC28A1-201ENST00000286749 BECN1Q14457 450 aa16.95■□□□□ 0.3
SLC28A1-201ENST00000286749 AAMPQ13685 434 aa16.94■□□□□ 0.3
SLC28A1-201ENST00000286749 PDZRN3Q9UPQ7 1066 aa16.94■□□□□ 0.3
SLC28A1-201ENST00000286749 CCDC27Q2M243 656 aa16.94■□□□□ 0.3
SLC28A1-201ENST00000286749 ASXL2Q76L83 1435 aa16.94■□□□□ 0.3
SLC28A1-201ENST00000286749 GLI2P10070 1586 aa16.93■□□□□ 0.3
SLC28A1-201ENST00000286749 SLKQ9H2G2 1235 aaPredicted RBP16.92■□□□□ 0.3
SLC28A1-201ENST00000286749 ARHGEF28Q8N1W1 1705 aaKnown RBP16.92■□□□□ 0.3
SLC28A1-201ENST00000286749 CYB5RLQ6IPT4 315 aa16.92■□□□□ 0.3
SLC28A1-201ENST00000286749 MYH16Q9H6N6 1097 aa16.92■□□□□ 0.3
SLC28A1-201ENST00000286749 U2AF1L5P0DN76 240 aaPredicted RBP16.91■□□□□ 0.3
SLC28A1-201ENST00000286749 U2AF1Q01081 240 aaKnown RBP eCLIP16.91■□□□□ 0.3
SLC28A1-201ENST00000286749 GGT6Q6P531 493 aa16.91■□□□□ 0.3
SLC28A1-201ENST00000286749 TULP4Q9NRJ4 1543 aa16.91■□□□□ 0.3
SLC28A1-201ENST00000286749 RWDD1Q9H446 243 aaPredicted RBP16.91■□□□□ 0.3
SLC28A1-201ENST00000286749 ADGRB2O60241 1585 aa16.9■□□□□ 0.3
SLC28A1-201ENST00000286749 UPF2Q9HAU5 1272 aaKnown RBP16.9■□□□□ 0.3
SLC28A1-201ENST00000286749 FRMPD1Q5SYB0 1578 aa16.9■□□□□ 0.3
SLC28A1-201ENST00000286749 ZMYM3Q14202 1370 aa16.89■□□□□ 0.3
SLC28A1-201ENST00000286749 NUTM2DQ5VT03 806 aaPredicted RBP16.89■□□□□ 0.29
SLC28A1-201ENST00000286749 TBC1D32Q96NH3 1257 aa16.89■□□□□ 0.29
SLC28A1-201ENST00000286749 ANKRD36BQ8N2N9 1353 aa16.89■□□□□ 0.29
SLC28A1-201ENST00000286749 MVPQ14764 893 aaKnown RBP16.89■□□□□ 0.29
SLC28A1-201ENST00000286749 HECW2Q9P2P5 1572 aa16.89■□□□□ 0.29
SLC28A1-201ENST00000286749 EVC2Q86UK5 1308 aa16.89■□□□□ 0.29
SLC28A1-201ENST00000286749 RPGRIP1LQ68CZ1 1315 aa16.88■□□□□ 0.29
SLC28A1-201ENST00000286749 TSR2Q969E8 191 aaKnown RBP16.87■□□□□ 0.29
SLC28A1-201ENST00000286749 POGKQ9P215 609 aa16.87■□□□□ 0.29
SLC28A1-201ENST00000286749 NSD2O96028 1365 aa16.87■□□□□ 0.29
SLC28A1-201ENST00000286749 SIGLEC1Q9BZZ2 1709 aa16.87■□□□□ 0.29
SLC28A1-201ENST00000286749 ZKSCAN2Q63HK3 967 aa16.87■□□□□ 0.29
SLC28A1-201ENST00000286749 CAMSAP1Q5T5Y3 1602 aa16.87■□□□□ 0.29
SLC28A1-201ENST00000286749 FTSJ3Q8IY81 847 aaKnown RBP16.86■□□□□ 0.29
SLC28A1-201ENST00000286749 CABP2Q9NPB3 220 aa16.86■□□□□ 0.29
SLC28A1-201ENST00000286749 ANTXR1Q9H6X2 564 aa16.86■□□□□ 0.29
SLC28A1-201ENST00000286749 ABCC3O15438 1527 aa16.86■□□□□ 0.29
SLC28A1-201ENST00000286749 DZIP1LQ8IYY4 767 aaKnown RBP16.85■□□□□ 0.29
SLC28A1-201ENST00000286749 TBC1D2Q9BYX2 928 aa16.85■□□□□ 0.29
SLC28A1-201ENST00000286749 SAFB2Q14151 953 aaKnown RBP eCLIP16.84■□□□□ 0.29
SLC28A1-201ENST00000286749 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
SLC28A1-201ENST00000286749 POGZQ7Z3K3 1410 aa16.84■□□□□ 0.29
SLC28A1-201ENST00000286749 PUS7Q96PZ0 661 aaKnown RBP16.84■□□□□ 0.29
SLC28A1-201ENST00000286749 NEXMIFQ5QGS0 1516 aa16.84■□□□□ 0.29
SLC28A1-201ENST00000286749 SMC4Q9NTJ3 1288 aa16.83■□□□□ 0.29
SLC28A1-201ENST00000286749 U2SURPO15042 1029 aaKnown RBP16.83■□□□□ 0.28
SLC28A1-201ENST00000286749 EXOSC9Q06265 439 aaKnown RBP16.83■□□□□ 0.28
SLC28A1-201ENST00000286749 CD109Q6YHK3 1445 aa16.83■□□□□ 0.28
SLC28A1-201ENST00000286749 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.83■□□□□ 0.28
SLC28A1-201ENST00000286749 PIK3C2BO00750 1634 aa16.82■□□□□ 0.28
SLC28A1-201ENST00000286749 MLH3Q9UHC1 1453 aa16.82■□□□□ 0.28
SLC28A1-201ENST00000286749 A0A1W2PP64 1363 aa16.82■□□□□ 0.28
SLC28A1-201ENST00000286749 CFAP74Q9C0B2 1584 aa16.82■□□□□ 0.28
SLC28A1-201ENST00000286749 VGFO15240 615 aaPredicted RBP16.81■□□□□ 0.28
SLC28A1-201ENST00000286749 CT47B1P0C2W7 299 aaPredicted RBP16.81■□□□□ 0.28
SLC28A1-201ENST00000286749 TRIM27P14373 513 aa16.81■□□□□ 0.28
SLC28A1-201ENST00000286749 SENP3Q9H4L4 574 aaPredicted RBP16.81■□□□□ 0.28
SLC28A1-201ENST00000286749 PLEKHF1Q96S99 279 aa16.81■□□□□ 0.28
SLC28A1-201ENST00000286749 ABCC11Q96J66 1382 aa16.8■□□□□ 0.28
SLC28A1-201ENST00000286749 TMPOP42166 694 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms