RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 MINK1Q8N4C8 1332 aaPredicted RBP30.56■■■□□ 2.48
PDLIM3-203ENST00000284771 NKTRP30414 1462 aaKnown RBP30.55■■■□□ 2.48
PDLIM3-203ENST00000284771 DISP3Q9P2K9 1392 aa30.54■■■□□ 2.48
PDLIM3-203ENST00000284771 PROSER2Q86WR7 435 aaPredicted RBP30.52■■■□□ 2.48
PDLIM3-203ENST00000284771 TMF1P82094 1093 aa30.49■■■□□ 2.47
PDLIM3-203ENST00000284771 TULP4Q9NRJ4 1543 aa30.48■■■□□ 2.47
PDLIM3-203ENST00000284771 WASHC2AQ641Q2 1341 aa30.48■■■□□ 2.47
PDLIM3-203ENST00000284771 TMEM94Q12767 1356 aa30.46■■■□□ 2.47
PDLIM3-203ENST00000284771 KIF7Q2M1P5 1343 aa30.46■■■□□ 2.47
PDLIM3-203ENST00000284771 LRRC7Q96NW7 1537 aa30.45■■■□□ 2.47
PDLIM3-203ENST00000284771 NALCNQ8IZF0 1738 aa30.44■■■□□ 2.46
PDLIM3-203ENST00000284771 SLC24A1O60721 1099 aa30.44■■■□□ 2.46
PDLIM3-203ENST00000284771 XIRP1Q702N8 1843 aaKnown RBP30.43■■■□□ 2.46
PDLIM3-203ENST00000284771 LTBP4Q8N2S1 1624 aa30.43■■■□□ 2.46
PDLIM3-203ENST00000284771 EVC2Q86UK5 1308 aa30.43■■■□□ 2.46
PDLIM3-203ENST00000284771 WASLO00401 505 aaPredicted RBP30.42■■■□□ 2.46
PDLIM3-203ENST00000284771 CDK19Q9BWU1 502 aa30.42■■■□□ 2.46
PDLIM3-203ENST00000284771 ADGRB2O60241 1585 aa30.42■■■□□ 2.46
PDLIM3-203ENST00000284771 CCDC7Q96M83 1385 aa30.41■■■□□ 2.46
PDLIM3-203ENST00000284771 ADGRL3Q9HAR2 1447 aa30.41■■■□□ 2.46
PDLIM3-203ENST00000284771 CABP2Q9NPB3 220 aa30.4■■■□□ 2.46
PDLIM3-203ENST00000284771 NCOA3Q9Y6Q9 1424 aa30.38■■■□□ 2.45
PDLIM3-203ENST00000284771 C14orf37Q86TY3 774 aa30.36■■■□□ 2.45
PDLIM3-203ENST00000284771 POLR3GLQ9BT43 218 aa30.36■■■□□ 2.45
PDLIM3-203ENST00000284771 SRPK2P78362 688 aaKnown RBP30.36■■■□□ 2.45
PDLIM3-203ENST00000284771 C19orf44Q9H6X5 657 aa30.35■■■□□ 2.45
PDLIM3-203ENST00000284771 CDCA8Q53HL2 280 aa30.33■■■□□ 2.45
PDLIM3-203ENST00000284771 PUS7Q96PZ0 661 aaKnown RBP30.33■■■□□ 2.45
PDLIM3-203ENST00000284771 NUTM2FA1L443 756 aa30.32■■■□□ 2.44
PDLIM3-203ENST00000284771 CDC42BPGQ6DT37 1551 aa30.32■■■□□ 2.44
PDLIM3-203ENST00000284771 PRR36Q9H6K5 1346 aa30.32■■■□□ 2.44
PDLIM3-203ENST00000284771 USP32Q8NFA0 1604 aa30.28■■■□□ 2.44
PDLIM3-203ENST00000284771 NUDT16Q96DE0 195 aaKnown RBP30.28■■■□□ 2.44
PDLIM3-203ENST00000284771 FMN2Q9NZ56 1722 aa30.28■■■□□ 2.44
PDLIM3-203ENST00000284771 ATP7BP35670 1465 aa30.27■■■□□ 2.44
PDLIM3-203ENST00000284771 DDX10Q13206 875 aaKnown RBP30.26■■■□□ 2.43
PDLIM3-203ENST00000284771 MYOM1P52179 1685 aa30.26■■■□□ 2.43
PDLIM3-203ENST00000284771 RGPD8O14715 1765 aaPredicted RBP30.25■■■□□ 2.43
PDLIM3-203ENST00000284771 MSH6P52701 1360 aa30.25■■■□□ 2.43
PDLIM3-203ENST00000284771 SLC12A5Q9H2X9 1139 aa30.25■■■□□ 2.43
PDLIM3-203ENST00000284771 ATAD2Q6PL18 1390 aa30.24■■■□□ 2.43
PDLIM3-203ENST00000284771 DCCP43146 1447 aa30.23■■■□□ 2.43
PDLIM3-203ENST00000284771 CCDC61Q9Y6R9 512 aa30.23■■■□□ 2.43
PDLIM3-203ENST00000284771 ATF3P18847 181 aa30.21■■■□□ 2.43
PDLIM3-203ENST00000284771 CABP1Q9NZU7 370 aa30.21■■■□□ 2.43
PDLIM3-203ENST00000284771 TMC1Q8TDI8 760 aa30.2■■■□□ 2.43
PDLIM3-203ENST00000284771 CADPS2Q86UW7 1296 aa30.2■■■□□ 2.42
PDLIM3-203ENST00000284771 ANKARQ7Z5J8 1434 aa30.19■■■□□ 2.42
PDLIM3-203ENST00000284771 MST1RQ04912 1400 aa30.18■■■□□ 2.42
PDLIM3-203ENST00000284771 TOPAZ1Q8N9V7 1692 aa30.18■■■□□ 2.42
PDLIM3-203ENST00000284771 PPIP5K1Q6PFW1 1433 aa30.17■■■□□ 2.42
PDLIM3-203ENST00000284771 PANK3Q9H999 370 aa30.15■■■□□ 2.42
PDLIM3-203ENST00000284771 C1orf167Q5SNV9 1468 aa30.15■■■□□ 2.42
PDLIM3-203ENST00000284771 CD163L1Q9NR16 1453 aa30.14■■■□□ 2.42
PDLIM3-203ENST00000284771 ORAI2Q96SN7 254 aa30.14■■■□□ 2.41
PDLIM3-203ENST00000284771 PLEKHG3A1L390 1219 aa30.13■■■□□ 2.41
PDLIM3-203ENST00000284771 NINLQ9Y2I6 1382 aa30.13■■■□□ 2.41
PDLIM3-203ENST00000284771 PMFBP1Q8TBY8 1022 aa30.12■■■□□ 2.41
PDLIM3-203ENST00000284771 ESCO1Q5FWF5 840 aa30.11■■■□□ 2.41
PDLIM3-203ENST00000284771 SLAIN2Q9P270 581 aa30.11■■■□□ 2.41
PDLIM3-203ENST00000284771 ITSN1Q15811 1721 aa30.1■■■□□ 2.41
PDLIM3-203ENST00000284771 CARD14Q9BXL6 1004 aa30.1■■■□□ 2.41
PDLIM3-203ENST00000284771 A0A1W2PP64 1363 aa30.08■■■□□ 2.41
PDLIM3-203ENST00000284771 PER1O15534 1290 aaPredicted RBP30.08■■■□□ 2.41
PDLIM3-203ENST00000284771 CPSF1Q10570 1443 aaKnown RBP30.08■■■□□ 2.41
PDLIM3-203ENST00000284771 ANKRD36BQ8N2N9 1353 aa30.08■■■□□ 2.41
PDLIM3-203ENST00000284771 ACEP12821 1306 aa30.08■■■□□ 2.41
PDLIM3-203ENST00000284771 PHF8Q9UPP1 1060 aa30.07■■■□□ 2.4
PDLIM3-203ENST00000284771 CERKQ8TCT0 537 aa30.06■■■□□ 2.4
PDLIM3-203ENST00000284771 POLR3AO14802 1390 aaPredicted RBP30.04■■■□□ 2.4
PDLIM3-203ENST00000284771 TERF2IPQ9NYB0 399 aa30.04■■■□□ 2.4
PDLIM3-203ENST00000284771 AKAP12Q02952 1782 aa30.01■■■□□ 2.4
PDLIM3-203ENST00000284771 BRINP3Q76B58 766 aa30.01■■■□□ 2.39
PDLIM3-203ENST00000284771 NGDNQ8NEJ9 315 aaKnown RBP30.01■■■□□ 2.39
PDLIM3-203ENST00000284771 HDGFL2Q7Z4V5 671 aaPredicted RBP30■■■□□ 2.39
PDLIM3-203ENST00000284771 IQSEC2Q5JU85 1478 aa30■■■□□ 2.39
PDLIM3-203ENST00000284771 FOXO3O43524 673 aa29.99■■■□□ 2.39
PDLIM3-203ENST00000284771 KTN1Q86UP2 1357 aaKnown RBP29.98■■■□□ 2.39
PDLIM3-203ENST00000284771 ZNF692Q9BU19 519 aaPredicted RBP29.98■■■□□ 2.39
PDLIM3-203ENST00000284771 DIEXFQ68CQ4 756 aaKnown RBP29.98■■■□□ 2.39
PDLIM3-203ENST00000284771 DDX17Q92841 729 aaKnown RBP29.96■■■□□ 2.39
PDLIM3-203ENST00000284771 NSD3Q9BZ95 1437 aa29.96■■■□□ 2.39
PDLIM3-203ENST00000284771 MON2Q7Z3U7 1717 aa29.96■■■□□ 2.39
PDLIM3-203ENST00000284771 USP6P35125 1406 aa29.95■■■□□ 2.39
PDLIM3-203ENST00000284771 KIF1AQ12756 1690 aa29.95■■■□□ 2.39
PDLIM3-203ENST00000284771 KNSTRNQ9Y448 316 aa29.94■■■□□ 2.38
PDLIM3-203ENST00000284771 SSH2Q76I76 1423 aa29.93■■■□□ 2.38
PDLIM3-203ENST00000284771 TOM1O60784 492 aa29.93■■■□□ 2.38
PDLIM3-203ENST00000284771 AMER1Q5JTC6 1135 aaPredicted RBP29.92■■■□□ 2.38
PDLIM3-203ENST00000284771 XPCQ01831 940 aaPredicted RBP29.91■■■□□ 2.38
PDLIM3-203ENST00000284771 UBAP1LF5GYI3 381 aa29.9■■■□□ 2.38
PDLIM3-203ENST00000284771 PSME1Q06323 249 aa29.9■■■□□ 2.38
PDLIM3-203ENST00000284771 EDC4Q6P2E9 1401 aaKnown RBP29.9■■■□□ 2.38
PDLIM3-203ENST00000284771 NRKQ7Z2Y5 1582 aa29.9■■■□□ 2.38
PDLIM3-203ENST00000284771 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.89■■■□□ 2.38
PDLIM3-203ENST00000284771 ROBO1Q9Y6N7 1651 aa29.89■■■□□ 2.37
PDLIM3-203ENST00000284771 TTC21BQ7Z4L5 1316 aa29.88■■■□□ 2.37
PDLIM3-203ENST00000284771 FYB1O15117 783 aa29.86■■■□□ 2.37
PDLIM3-203ENST00000284771 CNGB1Q14028 1251 aaPredicted RBP29.86■■■□□ 2.37
PDLIM3-203ENST00000284771 KRT28Q7Z3Y7 464 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms