RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 ATF3P18847 181 aa24.88■■□□□ 1.57
ATG3-201ENST00000283290 CADPS2Q86UW7 1296 aa24.87■■□□□ 1.57
ATG3-201ENST00000283290 PRAM1Q96QH2 718 aa24.87■■□□□ 1.57
ATG3-201ENST00000283290 SLAIN2Q9P270 581 aa24.87■■□□□ 1.57
ATG3-201ENST00000283290 DLC1Q96QB1 1528 aa24.86■■□□□ 1.57
ATG3-201ENST00000283290 FAM135BQ49AJ0 1406 aa24.85■■□□□ 1.57
ATG3-201ENST00000283290 RALGAPBQ86X10 1494 aa24.85■■□□□ 1.57
ATG3-201ENST00000283290 HSPA1LP34931 641 aa24.83■■□□□ 1.57
ATG3-201ENST00000283290 MST1RQ04912 1400 aa24.82■■□□□ 1.56
ATG3-201ENST00000283290 POGKQ9P215 609 aa24.82■■□□□ 1.56
ATG3-201ENST00000283290 CDC42BPGQ6DT37 1551 aa24.82■■□□□ 1.56
ATG3-201ENST00000283290 SIRT1Q96EB6 747 aa24.81■■□□□ 1.56
ATG3-201ENST00000283290 HIRIP3Q9BW71 556 aaPredicted RBP24.81■■□□□ 1.56
ATG3-201ENST00000283290 TIMELESSQ9UNS1 1208 aa24.81■■□□□ 1.56
ATG3-201ENST00000283290 CARD11Q9BXL7 1154 aa24.8■■□□□ 1.56
ATG3-201ENST00000283290 MINK1Q8N4C8 1332 aaPredicted RBP24.79■■□□□ 1.56
ATG3-201ENST00000283290 NUTM2FA1L443 756 aa24.77■■□□□ 1.56
ATG3-201ENST00000283290 QRICH2Q9H0J4 1663 aa24.77■■□□□ 1.56
ATG3-201ENST00000283290 GPRASP1Q5JY77 1395 aa24.76■■□□□ 1.55
ATG3-201ENST00000283290 FMN2Q9NZ56 1722 aa24.75■■□□□ 1.55
ATG3-201ENST00000283290 PHLPP1O60346 1717 aa24.75■■□□□ 1.55
ATG3-201ENST00000283290 C1orf167Q5SNV9 1468 aa24.74■■□□□ 1.55
ATG3-201ENST00000283290 RGPD8O14715 1765 aaPredicted RBP24.74■■□□□ 1.55
ATG3-201ENST00000283290 BRINP3Q76B58 766 aa24.73■■□□□ 1.55
ATG3-201ENST00000283290 ADGRB2O60241 1585 aa24.73■■□□□ 1.55
ATG3-201ENST00000283290 CENPJQ9HC77 1338 aaPredicted RBP24.69■■□□□ 1.54
ATG3-201ENST00000283290 NHSL1Q5SYE7 1610 aa24.69■■□□□ 1.54
ATG3-201ENST00000283290 AHDC1Q5TGY3 1603 aaPredicted RBP24.69■■□□□ 1.54
ATG3-201ENST00000283290 COL16A1Q07092 1604 aaPredicted RBP24.68■■□□□ 1.54
ATG3-201ENST00000283290 ORAI2Q96SN7 254 aa24.67■■□□□ 1.54
ATG3-201ENST00000283290 USP32Q8NFA0 1604 aa24.64■■□□□ 1.54
ATG3-201ENST00000283290 USP47Q96K76 1375 aa24.64■■□□□ 1.53
ATG3-201ENST00000283290 DDX17Q92841 729 aaKnown RBP24.63■■□□□ 1.53
ATG3-201ENST00000283290 EIF3AQ14152 1382 aaKnown RBP24.63■■□□□ 1.53
ATG3-201ENST00000283290 ST20-MTHFSA0A0A6YYL1 179 aa24.63■■□□□ 1.53
ATG3-201ENST00000283290 ESCO1Q5FWF5 840 aa24.62■■□□□ 1.53
ATG3-201ENST00000283290 TULP4Q9NRJ4 1543 aa24.62■■□□□ 1.53
ATG3-201ENST00000283290 WASLO00401 505 aaPredicted RBP24.59■■□□□ 1.53
ATG3-201ENST00000283290 CDK19Q9BWU1 502 aa24.59■■□□□ 1.53
ATG3-201ENST00000283290 PRR36Q9H6K5 1346 aa24.58■■□□□ 1.53
ATG3-201ENST00000283290 KIF1AQ12756 1690 aa24.58■■□□□ 1.53
ATG3-201ENST00000283290 CABP2Q9NPB3 220 aa24.58■■□□□ 1.52
ATG3-201ENST00000283290 ANKARQ7Z5J8 1434 aa24.56■■□□□ 1.52
ATG3-201ENST00000283290 SRPK2P78362 688 aaKnown RBP24.54■■□□□ 1.52
ATG3-201ENST00000283290 SHPRHQ149N8 1683 aa24.53■■□□□ 1.52
ATG3-201ENST00000283290 HSPA5P11021 654 aaKnown RBP24.53■■□□□ 1.52
ATG3-201ENST00000283290 PMFBP1Q8TBY8 1022 aa24.53■■□□□ 1.52
ATG3-201ENST00000283290 TESK2Q96S53 571 aa24.53■■□□□ 1.52
ATG3-201ENST00000283290 ITSN1Q15811 1721 aa24.53■■□□□ 1.52
ATG3-201ENST00000283290 MED1Q15648 1581 aaPredicted RBP24.52■■□□□ 1.52
ATG3-201ENST00000283290 FOXO3O43524 673 aa24.52■■□□□ 1.52
ATG3-201ENST00000283290 XPCQ01831 940 aaPredicted RBP24.52■■□□□ 1.52
ATG3-201ENST00000283290 ATP7BP35670 1465 aa24.52■■□□□ 1.52
ATG3-201ENST00000283290 JCADQ9P266 1359 aa24.52■■□□□ 1.52
ATG3-201ENST00000283290 NUDT16Q96DE0 195 aaKnown RBP24.51■■□□□ 1.51
ATG3-201ENST00000283290 TOPAZ1Q8N9V7 1692 aa24.51■■□□□ 1.51
ATG3-201ENST00000283290 PXDNQ92626 1479 aa24.51■■□□□ 1.51
ATG3-201ENST00000283290 PHF8Q9UPP1 1060 aa24.5■■□□□ 1.51
ATG3-201ENST00000283290 SOS2Q07890 1332 aaPredicted RBP24.5■■□□□ 1.51
ATG3-201ENST00000283290 NPHP3Q7Z494 1330 aa24.5■■□□□ 1.51
ATG3-201ENST00000283290 EVC2Q86UK5 1308 aa24.49■■□□□ 1.51
ATG3-201ENST00000283290 DISP3Q9P2K9 1392 aa24.49■■□□□ 1.51
ATG3-201ENST00000283290 EIF4G2P78344 907 aaKnown RBP eCLIP24.48■■□□□ 1.51
ATG3-201ENST00000283290 LRRC59Q96AG4 307 aaKnown RBP24.46■■□□□ 1.51
ATG3-201ENST00000283290 SBNO2Q9Y2G9 1366 aa24.46■■□□□ 1.51
ATG3-201ENST00000283290 PNPLA6Q8IY17 1366 aa24.43■■□□□ 1.5
ATG3-201ENST00000283290 PPIP5K1Q6PFW1 1433 aa24.42■■□□□ 1.5
ATG3-201ENST00000283290 KRT28Q7Z3Y7 464 aa24.42■■□□□ 1.5
ATG3-201ENST00000283290 LRP6O75581 1613 aa24.41■■□□□ 1.5
ATG3-201ENST00000283290 TRPM3Q9HCF6 1732 aaPredicted RBP24.4■■□□□ 1.5
ATG3-201ENST00000283290 CABP1Q9NZU7 370 aa24.4■■□□□ 1.5
ATG3-201ENST00000283290 CCDC61Q9Y6R9 512 aa24.4■■□□□ 1.5
ATG3-201ENST00000283290 POLR3GLQ9BT43 218 aa24.39■■□□□ 1.5
ATG3-201ENST00000283290 COL22A1Q8NFW1 1626 aaPredicted RBP24.39■■□□□ 1.5
ATG3-201ENST00000283290 SPATA31A6Q5VVP1 1343 aa24.39■■□□□ 1.49
ATG3-201ENST00000283290 NGDNQ8NEJ9 315 aaKnown RBP24.38■■□□□ 1.49
ATG3-201ENST00000283290 TMF1P82094 1093 aa24.37■■□□□ 1.49
ATG3-201ENST00000283290 PSME1Q06323 249 aa24.37■■□□□ 1.49
ATG3-201ENST00000283290 C11orf95C9JLR9 678 aaPredicted RBP24.37■■□□□ 1.49
ATG3-201ENST00000283290 PLEKHG5O94827 1062 aa24.37■■□□□ 1.49
ATG3-201ENST00000283290 TMC1Q8TDI8 760 aa24.37■■□□□ 1.49
ATG3-201ENST00000283290 ACEP12821 1306 aa24.37■■□□□ 1.49
ATG3-201ENST00000283290 SPATA31A3Q5VYP0 1347 aa24.35■■□□□ 1.49
ATG3-201ENST00000283290 NUTM2BA6NNL0 878 aaPredicted RBP24.35■■□□□ 1.49
ATG3-201ENST00000283290 NUTM2EB1AL46 878 aaPredicted RBP24.35■■□□□ 1.49
ATG3-201ENST00000283290 NUTM2AQ8IVF1 878 aaPredicted RBP24.35■■□□□ 1.49
ATG3-201ENST00000283290 TNS3Q68CZ2 1445 aa24.34■■□□□ 1.49
ATG3-201ENST00000283290 SLC12A5Q9H2X9 1139 aa24.34■■□□□ 1.49
ATG3-201ENST00000283290 POLR3AO14802 1390 aaPredicted RBP24.34■■□□□ 1.49
ATG3-201ENST00000283290 PLEKHG3A1L390 1219 aa24.33■■□□□ 1.49
ATG3-201ENST00000283290 ALS2Q96Q42 1657 aa24.33■■□□□ 1.49
ATG3-201ENST00000283290 AKAP12Q02952 1782 aa24.33■■□□□ 1.49
ATG3-201ENST00000283290 SBNO1A3KN83 1393 aa24.33■■□□□ 1.49
ATG3-201ENST00000283290 ATAD2Q6PL18 1390 aa24.33■■□□□ 1.49
ATG3-201ENST00000283290 MYOM1P52179 1685 aa24.33■■□□□ 1.49
ATG3-201ENST00000283290 ZEB1P37275 1124 aaPredicted RBP24.3■■□□□ 1.48
ATG3-201ENST00000283290 LMOD2Q6P5Q4 547 aa24.3■■□□□ 1.48
ATG3-201ENST00000283290 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
ATG3-201ENST00000283290 PAK3O75914 559 aaPredicted RBP24.29■■□□□ 1.48
ATG3-201ENST00000283290 ABCA3Q99758 1704 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms