RNA–Protein interactions for RNA: ENST00000279804.2

CTF1-201, Transcript of cardiotrophin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTF1, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-201ENST00000279804 MSH6P52701 1360 aa33.67■■■□□ 2.98
CTF1-201ENST00000279804 QRICH2Q9H0J4 1663 aa33.65■■■□□ 2.98
CTF1-201ENST00000279804 C19orf44Q9H6X5 657 aa33.63■■■□□ 2.97
CTF1-201ENST00000279804 UBAP1LF5GYI3 381 aa33.58■■■□□ 2.97
CTF1-201ENST00000279804 MINK1Q8N4C8 1332 aaPredicted RBP33.58■■■□□ 2.97
CTF1-201ENST00000279804 CDC42BPGQ6DT37 1551 aa33.57■■■□□ 2.96
CTF1-201ENST00000279804 HIRIP3Q9BW71 556 aaPredicted RBP33.57■■■□□ 2.96
CTF1-201ENST00000279804 CENPJQ9HC77 1338 aaPredicted RBP33.55■■■□□ 2.96
CTF1-201ENST00000279804 ADGRB2O60241 1585 aa33.55■■■□□ 2.96
CTF1-201ENST00000279804 DCCP43146 1447 aa33.55■■■□□ 2.96
CTF1-201ENST00000279804 ATF3P18847 181 aa33.55■■■□□ 2.96
CTF1-201ENST00000279804 FMN2Q9NZ56 1722 aa33.54■■■□□ 2.96
CTF1-201ENST00000279804 EIF3AQ14152 1382 aaKnown RBP33.54■■■□□ 2.96
CTF1-201ENST00000279804 TOM1O60784 492 aa33.52■■■□□ 2.96
CTF1-201ENST00000279804 RGPD8O14715 1765 aaPredicted RBP33.52■■■□□ 2.96
CTF1-201ENST00000279804 CADPS2Q86UW7 1296 aa33.51■■■□□ 2.95
CTF1-201ENST00000279804 USP47Q96K76 1375 aa33.49■■■□□ 2.95
CTF1-201ENST00000279804 MST1RQ04912 1400 aa33.48■■■□□ 2.95
CTF1-201ENST00000279804 PIP4K2BP78356 416 aa33.48■■■□□ 2.95
CTF1-201ENST00000279804 NUTM2FA1L443 756 aa33.46■■■□□ 2.95
CTF1-201ENST00000279804 SLAIN2Q9P270 581 aa33.46■■■□□ 2.95
CTF1-201ENST00000279804 SCAF1Q9H7N4 1312 aaKnown RBP33.45■■■□□ 2.95
CTF1-201ENST00000279804 ROBO1Q9Y6N7 1651 aa33.45■■■□□ 2.95
CTF1-201ENST00000279804 USP32Q8NFA0 1604 aa33.44■■■□□ 2.94
CTF1-201ENST00000279804 ST20-MTHFSA0A0A6YYL1 179 aa33.43■■■□□ 2.94
CTF1-201ENST00000279804 TULP4Q9NRJ4 1543 aa33.42■■■□□ 2.94
CTF1-201ENST00000279804 WASLO00401 505 aaPredicted RBP33.41■■■□□ 2.94
CTF1-201ENST00000279804 FBXO41Q8TF61 875 aa33.41■■■□□ 2.94
CTF1-201ENST00000279804 C1orf167Q5SNV9 1468 aa33.4■■■□□ 2.94
CTF1-201ENST00000279804 CDK19Q9BWU1 502 aa33.36■■■□□ 2.93
CTF1-201ENST00000279804 SBNO2Q9Y2G9 1366 aa33.35■■■□□ 2.93
CTF1-201ENST00000279804 TESK2Q96S53 571 aa33.34■■■□□ 2.93
CTF1-201ENST00000279804 ORAI2Q96SN7 254 aa33.33■■■□□ 2.93
CTF1-201ENST00000279804 PRR36Q9H6K5 1346 aa33.33■■■□□ 2.93
CTF1-201ENST00000279804 ITSN1Q15811 1721 aa33.32■■■□□ 2.92
CTF1-201ENST00000279804 EIF4G2P78344 907 aaKnown RBP eCLIP33.32■■■□□ 2.92
CTF1-201ENST00000279804 HSPA5P11021 654 aaKnown RBP33.31■■■□□ 2.92
CTF1-201ENST00000279804 BRINP3Q76B58 766 aa33.31■■■□□ 2.92
CTF1-201ENST00000279804 CABP2Q9NPB3 220 aa33.3■■■□□ 2.92
CTF1-201ENST00000279804 ATP7BP35670 1465 aa33.3■■■□□ 2.92
CTF1-201ENST00000279804 EVC2Q86UK5 1308 aa33.3■■■□□ 2.92
CTF1-201ENST00000279804 SRPK2P78362 688 aaKnown RBP33.29■■■□□ 2.92
CTF1-201ENST00000279804 ESCO1Q5FWF5 840 aa33.29■■■□□ 2.92
CTF1-201ENST00000279804 TOPAZ1Q8N9V7 1692 aa33.29■■■□□ 2.92
CTF1-201ENST00000279804 ANKARQ7Z5J8 1434 aa33.29■■■□□ 2.92
CTF1-201ENST00000279804 NHSL1Q5SYE7 1610 aa33.26■■■□□ 2.92
CTF1-201ENST00000279804 NUDT16Q96DE0 195 aaKnown RBP33.26■■■□□ 2.91
CTF1-201ENST00000279804 KIF1AQ12756 1690 aa33.25■■■□□ 2.91
CTF1-201ENST00000279804 PHLPP1O60346 1717 aa33.25■■■□□ 2.91
CTF1-201ENST00000279804 DISP3Q9P2K9 1392 aa33.23■■■□□ 2.91
CTF1-201ENST00000279804 DDX17Q92841 729 aaKnown RBP33.23■■■□□ 2.91
CTF1-201ENST00000279804 ILDR1Q86SU0 546 aaPredicted RBP33.2■■■□□ 2.9
CTF1-201ENST00000279804 PMFBP1Q8TBY8 1022 aa33.2■■■□□ 2.9
CTF1-201ENST00000279804 AHDC1Q5TGY3 1603 aaPredicted RBP33.19■■■□□ 2.9
CTF1-201ENST00000279804 PHF8Q9UPP1 1060 aa33.18■■■□□ 2.9
CTF1-201ENST00000279804 HSPA1LP34931 641 aa33.17■■■□□ 2.9
CTF1-201ENST00000279804 TMF1P82094 1093 aa33.17■■■□□ 2.9
CTF1-201ENST00000279804 CCDC61Q9Y6R9 512 aa33.16■■■□□ 2.9
CTF1-201ENST00000279804 PPIP5K1Q6PFW1 1433 aa33.15■■■□□ 2.9
CTF1-201ENST00000279804 FOXO3O43524 673 aa33.15■■■□□ 2.9
CTF1-201ENST00000279804 COL16A1Q07092 1604 aaPredicted RBP33.14■■■□□ 2.9
CTF1-201ENST00000279804 SLC24A1O60721 1099 aa33.12■■■□□ 2.89
CTF1-201ENST00000279804 XPCQ01831 940 aaPredicted RBP33.11■■■□□ 2.89
CTF1-201ENST00000279804 ATAD2Q6PL18 1390 aa33.1■■■□□ 2.89
CTF1-201ENST00000279804 CABP1Q9NZU7 370 aa33.1■■■□□ 2.89
CTF1-201ENST00000279804 PXDNQ92626 1479 aa33.08■■■□□ 2.89
CTF1-201ENST00000279804 NPHP3Q7Z494 1330 aa33.07■■■□□ 2.88
CTF1-201ENST00000279804 AKAP12Q02952 1782 aa33.07■■■□□ 2.88
CTF1-201ENST00000279804 MYOM1P52179 1685 aa33.07■■■□□ 2.88
CTF1-201ENST00000279804 NGDNQ8NEJ9 315 aaKnown RBP33.07■■■□□ 2.88
CTF1-201ENST00000279804 ACEP12821 1306 aa33.06■■■□□ 2.88
CTF1-201ENST00000279804 PLEKHG3A1L390 1219 aa33.05■■■□□ 2.88
CTF1-201ENST00000279804 C11orf95C9JLR9 678 aaPredicted RBP33.05■■■□□ 2.88
CTF1-201ENST00000279804 PUS7Q96PZ0 661 aaKnown RBP33.04■■■□□ 2.88
CTF1-201ENST00000279804 TRPM3Q9HCF6 1732 aaPredicted RBP33.03■■■□□ 2.88
CTF1-201ENST00000279804 TMC1Q8TDI8 760 aa33.03■■■□□ 2.88
CTF1-201ENST00000279804 SOS2Q07890 1332 aaPredicted RBP33.03■■■□□ 2.88
CTF1-201ENST00000279804 POLR3AO14802 1390 aaPredicted RBP33.03■■■□□ 2.88
CTF1-201ENST00000279804 POLR3GLQ9BT43 218 aa33.02■■■□□ 2.88
CTF1-201ENST00000279804 ZNF316A6NFI3 1004 aaPredicted RBP33.01■■■□□ 2.88
CTF1-201ENST00000279804 PSME1Q06323 249 aa33.01■■■□□ 2.88
CTF1-201ENST00000279804 KRT28Q7Z3Y7 464 aa33.01■■■□□ 2.88
CTF1-201ENST00000279804 CDCA8Q53HL2 280 aa33.01■■■□□ 2.87
CTF1-201ENST00000279804 SLC12A5Q9H2X9 1139 aa33.01■■■□□ 2.87
CTF1-201ENST00000279804 MON2Q7Z3U7 1717 aa32.98■■■□□ 2.87
CTF1-201ENST00000279804 CD163L1Q9NR16 1453 aa32.98■■■□□ 2.87
CTF1-201ENST00000279804 SHPRHQ149N8 1683 aa32.95■■■□□ 2.86
CTF1-201ENST00000279804 CPSF1Q10570 1443 aaKnown RBP32.94■■■□□ 2.86
CTF1-201ENST00000279804 ALS2Q96Q42 1657 aa32.93■■■□□ 2.86
CTF1-201ENST00000279804 LRRC59Q96AG4 307 aaKnown RBP32.93■■■□□ 2.86
CTF1-201ENST00000279804 NRKQ7Z2Y5 1582 aa32.92■■■□□ 2.86
CTF1-201ENST00000279804 KIF7Q2M1P5 1343 aa32.92■■■□□ 2.86
CTF1-201ENST00000279804 USP6P35125 1406 aa32.92■■■□□ 2.86
CTF1-201ENST00000279804 NINLQ9Y2I6 1382 aa32.91■■■□□ 2.86
CTF1-201ENST00000279804 A0A1W2PP64 1363 aa32.9■■■□□ 2.86
CTF1-201ENST00000279804 PAK3O75914 559 aaPredicted RBP32.89■■■□□ 2.86
CTF1-201ENST00000279804 TNS3Q68CZ2 1445 aa32.89■■■□□ 2.86
CTF1-201ENST00000279804 SPATA31A3Q5VYP0 1347 aa32.89■■■□□ 2.86
CTF1-201ENST00000279804 SBNO1A3KN83 1393 aa32.88■■■□□ 2.85
CTF1-201ENST00000279804 KTN1Q86UP2 1357 aaKnown RBP32.88■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms