RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 LRRC7Q96NW7 1537 aa24.16■■□□□ 1.46
SKP2-201ENST00000274254 NCOA3Q9Y6Q9 1424 aa24.16■■□□□ 1.46
SKP2-201ENST00000274254 TMEM94Q12767 1356 aa24.15■■□□□ 1.46
SKP2-201ENST00000274254 RBM33Q96EV2 1170 aaKnown RBP24.15■■□□□ 1.46
SKP2-201ENST00000274254 MINK1Q8N4C8 1332 aaPredicted RBP24.14■■□□□ 1.45
SKP2-201ENST00000274254 ADGRB2O60241 1585 aa24.14■■□□□ 1.45
SKP2-201ENST00000274254 NALCNQ8IZF0 1738 aa24.13■■□□□ 1.45
SKP2-201ENST00000274254 ADGRL3Q9HAR2 1447 aa24.12■■□□□ 1.45
SKP2-201ENST00000274254 XIRP1Q702N8 1843 aaKnown RBP24.12■■□□□ 1.45
SKP2-201ENST00000274254 SLC24A1O60721 1099 aa24.12■■□□□ 1.45
SKP2-201ENST00000274254 TULP4Q9NRJ4 1543 aa24.09■■□□□ 1.45
SKP2-201ENST00000274254 DISP3Q9P2K9 1392 aa24.08■■□□□ 1.45
SKP2-201ENST00000274254 TMF1P82094 1093 aa24.08■■□□□ 1.45
SKP2-201ENST00000274254 EVC2Q86UK5 1308 aa24.07■■□□□ 1.44
SKP2-201ENST00000274254 CDC42BPGQ6DT37 1551 aa24.07■■□□□ 1.44
SKP2-201ENST00000274254 WASLO00401 505 aaPredicted RBP24.06■■□□□ 1.44
SKP2-201ENST00000274254 C19orf44Q9H6X5 657 aa24.06■■□□□ 1.44
SKP2-201ENST00000274254 C11orf95C9JLR9 678 aaPredicted RBP24.05■■□□□ 1.44
SKP2-201ENST00000274254 C14orf37Q86TY3 774 aa24.05■■□□□ 1.44
SKP2-201ENST00000274254 DCCP43146 1447 aa24.04■■□□□ 1.44
SKP2-201ENST00000274254 CDK19Q9BWU1 502 aa24.03■■□□□ 1.44
SKP2-201ENST00000274254 PUS7Q96PZ0 661 aaKnown RBP24.02■■□□□ 1.44
SKP2-201ENST00000274254 MSH6P52701 1360 aa24.02■■□□□ 1.44
SKP2-201ENST00000274254 CDCA8Q53HL2 280 aa24■■□□□ 1.43
SKP2-201ENST00000274254 FMN2Q9NZ56 1722 aa24■■□□□ 1.43
SKP2-201ENST00000274254 ZNF316A6NFI3 1004 aaPredicted RBP24■■□□□ 1.43
SKP2-201ENST00000274254 KIF7Q2M1P5 1343 aa23.99■■□□□ 1.43
SKP2-201ENST00000274254 SRPK2P78362 688 aaKnown RBP23.99■■□□□ 1.43
SKP2-201ENST00000274254 CABP2Q9NPB3 220 aa23.99■■□□□ 1.43
SKP2-201ENST00000274254 WASHC2AQ641Q2 1341 aa23.98■■□□□ 1.43
SKP2-201ENST00000274254 CCDC7Q96M83 1385 aa23.98■■□□□ 1.43
SKP2-201ENST00000274254 ATP7BP35670 1465 aa23.96■■□□□ 1.43
SKP2-201ENST00000274254 ATF3P18847 181 aa23.96■■□□□ 1.43
SKP2-201ENST00000274254 CADPS2Q86UW7 1296 aa23.96■■□□□ 1.43
SKP2-201ENST00000274254 ANKARQ7Z5J8 1434 aa23.96■■□□□ 1.43
SKP2-201ENST00000274254 PRR36Q9H6K5 1346 aa23.96■■□□□ 1.43
SKP2-201ENST00000274254 USP32Q8NFA0 1604 aa23.96■■□□□ 1.43
SKP2-201ENST00000274254 ATAD2Q6PL18 1390 aa23.96■■□□□ 1.43
SKP2-201ENST00000274254 IQSEC2Q5JU85 1478 aa23.95■■□□□ 1.42
SKP2-201ENST00000274254 NUDT16Q96DE0 195 aaKnown RBP23.94■■□□□ 1.42
SKP2-201ENST00000274254 MST1RQ04912 1400 aa23.93■■□□□ 1.42
SKP2-201ENST00000274254 NUTM2FA1L443 756 aa23.92■■□□□ 1.42
SKP2-201ENST00000274254 CCDC61Q9Y6R9 512 aa23.91■■□□□ 1.42
SKP2-201ENST00000274254 TOPAZ1Q8N9V7 1692 aa23.91■■□□□ 1.42
SKP2-201ENST00000274254 CERKQ8TCT0 537 aa23.9■■□□□ 1.42
SKP2-201ENST00000274254 RGPD8O14715 1765 aaPredicted RBP23.9■■□□□ 1.42
SKP2-201ENST00000274254 C1orf167Q5SNV9 1468 aa23.9■■□□□ 1.42
SKP2-201ENST00000274254 MYOM1P52179 1685 aa23.89■■□□□ 1.42
SKP2-201ENST00000274254 POLR3GLQ9BT43 218 aa23.89■■□□□ 1.41
SKP2-201ENST00000274254 NINLQ9Y2I6 1382 aa23.89■■□□□ 1.41
SKP2-201ENST00000274254 ITSN1Q15811 1721 aa23.88■■□□□ 1.41
SKP2-201ENST00000274254 PPIP5K1Q6PFW1 1433 aa23.86■■□□□ 1.41
SKP2-201ENST00000274254 CABP1Q9NZU7 370 aa23.85■■□□□ 1.41
SKP2-201ENST00000274254 SLAIN2Q9P270 581 aa23.85■■□□□ 1.41
SKP2-201ENST00000274254 SLC12A5Q9H2X9 1139 aa23.84■■□□□ 1.41
SKP2-201ENST00000274254 PLEKHG3A1L390 1219 aa23.84■■□□□ 1.41
SKP2-201ENST00000274254 TMC1Q8TDI8 760 aa23.83■■□□□ 1.41
SKP2-201ENST00000274254 ESCO1Q5FWF5 840 aa23.82■■□□□ 1.4
SKP2-201ENST00000274254 ORAI2Q96SN7 254 aa23.82■■□□□ 1.4
SKP2-201ENST00000274254 CD163L1Q9NR16 1453 aa23.81■■□□□ 1.4
SKP2-201ENST00000274254 PHF8Q9UPP1 1060 aa23.8■■□□□ 1.4
SKP2-201ENST00000274254 TOM1O60784 492 aa23.79■■□□□ 1.4
SKP2-201ENST00000274254 POLR3AO14802 1390 aaPredicted RBP23.79■■□□□ 1.4
SKP2-201ENST00000274254 KIF1AQ12756 1690 aa23.79■■□□□ 1.4
SKP2-201ENST00000274254 CPSF1Q10570 1443 aaKnown RBP23.79■■□□□ 1.4
SKP2-201ENST00000274254 ANKRD36BQ8N2N9 1353 aa23.79■■□□□ 1.4
SKP2-201ENST00000274254 BRINP3Q76B58 766 aa23.78■■□□□ 1.4
SKP2-201ENST00000274254 PMFBP1Q8TBY8 1022 aa23.78■■□□□ 1.4
SKP2-201ENST00000274254 ACEP12821 1306 aa23.77■■□□□ 1.4
SKP2-201ENST00000274254 A0A1W2PP64 1363 aa23.76■■□□□ 1.39
SKP2-201ENST00000274254 TERF2IPQ9NYB0 399 aa23.76■■□□□ 1.39
SKP2-201ENST00000274254 DDX10Q13206 875 aaKnown RBP23.75■■□□□ 1.39
SKP2-201ENST00000274254 PANK3Q9H999 370 aa23.75■■□□□ 1.39
SKP2-201ENST00000274254 AKAP12Q02952 1782 aa23.75■■□□□ 1.39
SKP2-201ENST00000274254 UBAP1LF5GYI3 381 aa23.74■■□□□ 1.39
SKP2-201ENST00000274254 NGDNQ8NEJ9 315 aaKnown RBP23.74■■□□□ 1.39
SKP2-201ENST00000274254 HDGFL2Q7Z4V5 671 aaPredicted RBP23.73■■□□□ 1.39
SKP2-201ENST00000274254 ZNF692Q9BU19 519 aaPredicted RBP23.73■■□□□ 1.39
SKP2-201ENST00000274254 FOXO3O43524 673 aa23.72■■□□□ 1.39
SKP2-201ENST00000274254 CARD14Q9BXL6 1004 aa23.72■■□□□ 1.39
SKP2-201ENST00000274254 ROBO1Q9Y6N7 1651 aa23.72■■□□□ 1.39
SKP2-201ENST00000274254 MON2Q7Z3U7 1717 aa23.72■■□□□ 1.39
SKP2-201ENST00000274254 USP6P35125 1406 aa23.71■■□□□ 1.39
SKP2-201ENST00000274254 KTN1Q86UP2 1357 aaKnown RBP23.7■■□□□ 1.38
SKP2-201ENST00000274254 PER1O15534 1290 aaPredicted RBP23.69■■□□□ 1.38
SKP2-201ENST00000274254 SSH2Q76I76 1423 aa23.69■■□□□ 1.38
SKP2-201ENST00000274254 NPHP3Q7Z494 1330 aa23.68■■□□□ 1.38
SKP2-201ENST00000274254 EDC4Q6P2E9 1401 aaKnown RBP23.68■■□□□ 1.38
SKP2-201ENST00000274254 NRKQ7Z2Y5 1582 aa23.68■■□□□ 1.38
SKP2-201ENST00000274254 NHSL1Q5SYE7 1610 aa23.67■■□□□ 1.38
SKP2-201ENST00000274254 NSD3Q9BZ95 1437 aa23.66■■□□□ 1.38
SKP2-201ENST00000274254 BRD4O60885 1362 aaPredicted RBP23.66■■□□□ 1.38
SKP2-201ENST00000274254 PIP4K2BP78356 416 aa23.66■■□□□ 1.38
SKP2-201ENST00000274254 PSME1Q06323 249 aa23.66■■□□□ 1.38
SKP2-201ENST00000274254 DDX17Q92841 729 aaKnown RBP23.66■■□□□ 1.38
SKP2-201ENST00000274254 PXDNQ92626 1479 aa23.65■■□□□ 1.38
SKP2-201ENST00000274254 AHDC1Q5TGY3 1603 aaPredicted RBP23.65■■□□□ 1.38
SKP2-201ENST00000274254 KRT28Q7Z3Y7 464 aa23.64■■□□□ 1.37
SKP2-201ENST00000274254 TRPM3Q9HCF6 1732 aaPredicted RBP23.63■■□□□ 1.37
SKP2-201ENST00000274254 SOS2Q07890 1332 aaPredicted RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms