RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 LRRC59Q96AG4 307 aaKnown RBP25.35■■□□□ 1.65
SEC22C-202ENST00000273156 SIRT1Q96EB6 747 aa25.35■■□□□ 1.65
SEC22C-202ENST00000273156 C1orf167Q5SNV9 1468 aa25.35■■□□□ 1.65
SEC22C-202ENST00000273156 NALCNQ8IZF0 1738 aa25.34■■□□□ 1.65
SEC22C-202ENST00000273156 ZNF316A6NFI3 1004 aaPredicted RBP25.34■■□□□ 1.65
SEC22C-202ENST00000273156 YTHDC2Q9H6S0 1430 aaKnown RBP25.32■■□□□ 1.64
SEC22C-202ENST00000273156 L3MBTL2Q969R5 705 aa25.32■■□□□ 1.64
SEC22C-202ENST00000273156 RGS17Q9UGC6 210 aaPredicted RBP25.32■■□□□ 1.64
SEC22C-202ENST00000273156 CFAP70Q5T0N1 1121 aa25.3■■□□□ 1.64
SEC22C-202ENST00000273156 WAPLQ7Z5K2 1190 aa25.3■■□□□ 1.64
SEC22C-202ENST00000273156 MEX3CQ5U5Q3 659 aaKnown RBP25.28■■□□□ 1.64
SEC22C-202ENST00000273156 DCAF11Q8TEB1 546 aa25.27■■□□□ 1.64
SEC22C-202ENST00000273156 LAMC1P11047 1609 aa25.27■■□□□ 1.64
SEC22C-202ENST00000273156 CDC42BPGQ6DT37 1551 aa25.27■■□□□ 1.64
SEC22C-202ENST00000273156 ORAI2Q96SN7 254 aa25.26■■□□□ 1.63
SEC22C-202ENST00000273156 NHSL1Q5SYE7 1610 aa25.25■■□□□ 1.63
SEC22C-202ENST00000273156 SHPRHQ149N8 1683 aa25.24■■□□□ 1.63
SEC22C-202ENST00000273156 ESCO1Q5FWF5 840 aa25.23■■□□□ 1.63
SEC22C-202ENST00000273156 KDM2AQ9Y2K7 1162 aa25.23■■□□□ 1.63
SEC22C-202ENST00000273156 KNDC1Q76NI1 1749 aa25.23■■□□□ 1.63
SEC22C-202ENST00000273156 SOS2Q07890 1332 aaPredicted RBP25.22■■□□□ 1.63
SEC22C-202ENST00000273156 DDX17Q92841 729 aaKnown RBP25.22■■□□□ 1.63
SEC22C-202ENST00000273156 NPHP3Q7Z494 1330 aa25.22■■□□□ 1.63
SEC22C-202ENST00000273156 ZNF772Q68DY9 489 aaPredicted RBP25.21■■□□□ 1.63
SEC22C-202ENST00000273156 PLEKHH1Q9ULM0 1364 aa25.21■■□□□ 1.63
SEC22C-202ENST00000273156 NUTM2BA6NNL0 878 aaPredicted RBP25.19■■□□□ 1.62
SEC22C-202ENST00000273156 NUTM2EB1AL46 878 aaPredicted RBP25.19■■□□□ 1.62
SEC22C-202ENST00000273156 POTEAQ6S8J7 498 aa25.19■■□□□ 1.62
SEC22C-202ENST00000273156 NUTM2AQ8IVF1 878 aaPredicted RBP25.19■■□□□ 1.62
SEC22C-202ENST00000273156 POGKQ9P215 609 aa25.19■■□□□ 1.62
SEC22C-202ENST00000273156 LRP6O75581 1613 aa25.19■■□□□ 1.62
SEC22C-202ENST00000273156 PRAM1Q96QH2 718 aa25.19■■□□□ 1.62
SEC22C-202ENST00000273156 PNPLA6Q8IY17 1366 aa25.18■■□□□ 1.62
SEC22C-202ENST00000273156 DLC1Q96QB1 1528 aa25.16■■□□□ 1.62
SEC22C-202ENST00000273156 NUTM2FA1L443 756 aa25.13■■□□□ 1.61
SEC22C-202ENST00000273156 FOXO3O43524 673 aa25.13■■□□□ 1.61
SEC22C-202ENST00000273156 ADGRB1O14514 1584 aa25.13■■□□□ 1.61
SEC22C-202ENST00000273156 TRAK1Q9UPV9 953 aa25.12■■□□□ 1.61
SEC22C-202ENST00000273156 SAFB2Q14151 953 aaKnown RBP eCLIP25.11■■□□□ 1.61
SEC22C-202ENST00000273156 NBPF8Q3BBV2 869 aa25.08■■□□□ 1.61
SEC22C-202ENST00000273156 EIF3AQ14152 1382 aaKnown RBP25.07■■□□□ 1.6
SEC22C-202ENST00000273156 C8orf37Q96NL8 207 aa25.07■■□□□ 1.6
SEC22C-202ENST00000273156 PHF8Q9UPP1 1060 aa25.06■■□□□ 1.6
SEC22C-202ENST00000273156 PXDNQ92626 1479 aa25.06■■□□□ 1.6
SEC22C-202ENST00000273156 AFF2P51816 1311 aa25.06■■□□□ 1.6
SEC22C-202ENST00000273156 FMN2Q9NZ56 1722 aa25.05■■□□□ 1.6
SEC22C-202ENST00000273156 PSME1Q06323 249 aa25.05■■□□□ 1.6
SEC22C-202ENST00000273156 ANKARQ7Z5J8 1434 aa25.05■■□□□ 1.6
SEC22C-202ENST00000273156 NGLY1Q96IV0 654 aa25.04■■□□□ 1.6
SEC22C-202ENST00000273156 ADAMTS2O95450 1211 aa25.04■■□□□ 1.6
SEC22C-202ENST00000273156 RXRBP28702 533 aa25.03■■□□□ 1.6
SEC22C-202ENST00000273156 XPCQ01831 940 aaPredicted RBP25.03■■□□□ 1.6
SEC22C-202ENST00000273156 DIEXFQ68CQ4 756 aaKnown RBP25.02■■□□□ 1.6
SEC22C-202ENST00000273156 KRT28Q7Z3Y7 464 aa25.02■■□□□ 1.6
SEC22C-202ENST00000273156 KIF1AQ12756 1690 aa25.02■■□□□ 1.6
SEC22C-202ENST00000273156 ADGRB2O60241 1585 aa25■■□□□ 1.59
SEC22C-202ENST00000273156 SPATA31A3Q5VYP0 1347 aa25■■□□□ 1.59
SEC22C-202ENST00000273156 MINK1Q8N4C8 1332 aaPredicted RBP25■■□□□ 1.59
SEC22C-202ENST00000273156 WASLO00401 505 aaPredicted RBP25■■□□□ 1.59
SEC22C-202ENST00000273156 EIF4G2P78344 907 aaKnown RBP eCLIP24.99■■□□□ 1.59
SEC22C-202ENST00000273156 HIRIP3Q9BW71 556 aaPredicted RBP24.99■■□□□ 1.59
SEC22C-202ENST00000273156 COL22A1Q8NFW1 1626 aaPredicted RBP24.98■■□□□ 1.59
SEC22C-202ENST00000273156 QTRT2Q9H974 415 aaKnown RBP24.97■■□□□ 1.59
SEC22C-202ENST00000273156 FNBP4Q8N3X1 1017 aaPredicted RBP24.95■■□□□ 1.58
SEC22C-202ENST00000273156 SBNO1A3KN83 1393 aa24.95■■□□□ 1.58
SEC22C-202ENST00000273156 RBM6P78332 1123 aaKnown RBP24.94■■□□□ 1.58
SEC22C-202ENST00000273156 CDK12Q9NYV4 1490 aaPredicted RBP24.94■■□□□ 1.58
SEC22C-202ENST00000273156 USP21Q9UK80 565 aa24.94■■□□□ 1.58
SEC22C-202ENST00000273156 KIAA1210Q9ULL0 1709 aa24.93■■□□□ 1.58
SEC22C-202ENST00000273156 PMFBP1Q8TBY8 1022 aa24.93■■□□□ 1.58
SEC22C-202ENST00000273156 ARHGEF10O15013 1369 aa24.93■■□□□ 1.58
SEC22C-202ENST00000273156 TNS3Q68CZ2 1445 aa24.92■■□□□ 1.58
SEC22C-202ENST00000273156 HSPA5P11021 654 aaKnown RBP24.92■■□□□ 1.58
SEC22C-202ENST00000273156 GPRASP1Q5JY77 1395 aa24.92■■□□□ 1.58
SEC22C-202ENST00000273156 TULP4Q9NRJ4 1543 aa24.91■■□□□ 1.58
SEC22C-202ENST00000273156 TRPC5Q9UL62 973 aaPredicted RBP24.91■■□□□ 1.58
SEC22C-202ENST00000273156 RALGAPBQ86X10 1494 aa24.9■■□□□ 1.58
SEC22C-202ENST00000273156 NBPF1Q3BBV0 1214 aa24.9■■□□□ 1.58
SEC22C-202ENST00000273156 HAP1P54257 671 aaPredicted RBP24.9■■□□□ 1.58
SEC22C-202ENST00000273156 NGDNQ8NEJ9 315 aaKnown RBP24.88■■□□□ 1.57
SEC22C-202ENST00000273156 PRR36Q9H6K5 1346 aa24.88■■□□□ 1.57
SEC22C-202ENST00000273156 LMOD2Q6P5Q4 547 aa24.87■■□□□ 1.57
SEC22C-202ENST00000273156 CARD11Q9BXL7 1154 aa24.87■■□□□ 1.57
SEC22C-202ENST00000273156 NUDT16Q96DE0 195 aaKnown RBP24.86■■□□□ 1.57
SEC22C-202ENST00000273156 CDK19Q9BWU1 502 aa24.86■■□□□ 1.57
SEC22C-202ENST00000273156 ARHGEF28Q8N1W1 1705 aaKnown RBP24.86■■□□□ 1.57
SEC22C-202ENST00000273156 USP32Q8NFA0 1604 aa24.85■■□□□ 1.57
SEC22C-202ENST00000273156 ROCK2O75116 1388 aaKnown RBP24.85■■□□□ 1.57
SEC22C-202ENST00000273156 CENPJQ9HC77 1338 aaPredicted RBP24.84■■□□□ 1.57
SEC22C-202ENST00000273156 CCDC61Q9Y6R9 512 aa24.83■■□□□ 1.57
SEC22C-202ENST00000273156 RGPD8O14715 1765 aaPredicted RBP24.83■■□□□ 1.56
SEC22C-202ENST00000273156 ATP7BP35670 1465 aa24.8■■□□□ 1.56
SEC22C-202ENST00000273156 ATRNO75882 1429 aa24.8■■□□□ 1.56
SEC22C-202ENST00000273156 USP47Q96K76 1375 aa24.8■■□□□ 1.56
SEC22C-202ENST00000273156 BCL9LQ86UU0 1499 aa24.8■■□□□ 1.56
SEC22C-202ENST00000273156 UNC5CLQ8IV45 518 aa24.79■■□□□ 1.56
SEC22C-202ENST00000273156 CABLES1Q8TDN4 633 aa24.78■■□□□ 1.56
SEC22C-202ENST00000273156 PLEKHG3A1L390 1219 aa24.77■■□□□ 1.56
SEC22C-202ENST00000273156 PAK3O75914 559 aaPredicted RBP24.77■■□□□ 1.56
SEC22C-202ENST00000273156 SRPK2P78362 688 aaKnown RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms