RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 PLEKHO1Q53GL0 409 aaPredicted RBP17■□□□□ 0.31
NPC1-201ENST00000269228 CDCA7LQ96GN5 454 aa16.99■□□□□ 0.31
NPC1-201ENST00000269228 NUDT16Q96DE0 195 aaKnown RBP16.99■□□□□ 0.31
NPC1-201ENST00000269228 ATAD2Q6PL18 1390 aa16.99■□□□□ 0.31
NPC1-201ENST00000269228 WDR97A6NE52 1622 aa16.98■□□□□ 0.31
NPC1-201ENST00000269228 ATP10BO94823 1461 aa16.98■□□□□ 0.31
NPC1-201ENST00000269228 RIC3Q7Z5B4 369 aa16.98■□□□□ 0.31
NPC1-201ENST00000269228 CCDC61Q9Y6R9 512 aa16.98■□□□□ 0.31
NPC1-201ENST00000269228 NUTM2BA6NNL0 878 aaPredicted RBP16.97■□□□□ 0.31
NPC1-201ENST00000269228 NUTM2EB1AL46 878 aaPredicted RBP16.97■□□□□ 0.31
NPC1-201ENST00000269228 NUTM2AQ8IVF1 878 aaPredicted RBP16.97■□□□□ 0.31
NPC1-201ENST00000269228 GPATCH8Q9UKJ3 1502 aaKnown RBP16.97■□□□□ 0.31
NPC1-201ENST00000269228 PANK1Q8TE04 598 aa16.97■□□□□ 0.31
NPC1-201ENST00000269228 FOXD4L1Q9NU39 408 aa16.97■□□□□ 0.31
NPC1-201ENST00000269228 RRS1Q15050 365 aaKnown RBP16.96■□□□□ 0.31
NPC1-201ENST00000269228 ADGRF5Q8IZF2 1346 aa16.96■□□□□ 0.31
NPC1-201ENST00000269228 DNTTIP2Q5QJE6 756 aaKnown RBP16.96■□□□□ 0.31
NPC1-201ENST00000269228 SMG6Q86US8 1419 aaKnown RBP16.96■□□□□ 0.3
NPC1-201ENST00000269228 ASXL2Q76L83 1435 aa16.95■□□□□ 0.3
NPC1-201ENST00000269228 TATP17735 454 aaPredicted RBP16.95■□□□□ 0.3
NPC1-201ENST00000269228 GBP4Q96PP9 640 aa16.95■□□□□ 0.3
NPC1-201ENST00000269228 RAPGEF6Q8TEU7 1601 aa16.95■□□□□ 0.3
NPC1-201ENST00000269228 TOM1L2Q6ZVM7 507 aa16.95■□□□□ 0.3
NPC1-201ENST00000269228 IFIT2P09913 472 aaKnown RBP16.94■□□□□ 0.3
NPC1-201ENST00000269228 G3BP1Q13283 466 aaKnown RBP eCLIP16.94■□□□□ 0.3
NPC1-201ENST00000269228 DHX29Q7Z478 1369 aaKnown RBP16.94■□□□□ 0.3
NPC1-201ENST00000269228 EXOSC9Q06265 439 aaKnown RBP16.94■□□□□ 0.3
NPC1-201ENST00000269228 PRDM11Q9NQV5 511 aa16.94■□□□□ 0.3
NPC1-201ENST00000269228 PIP4K2BP78356 416 aa16.93■□□□□ 0.3
NPC1-201ENST00000269228 TSHZ2Q9NRE2 1034 aa16.93■□□□□ 0.3
NPC1-201ENST00000269228 DIAPH3Q9NSV4 1193 aa16.93■□□□□ 0.3
NPC1-201ENST00000269228 FAM161AQ3B820 660 aa16.92■□□□□ 0.3
NPC1-201ENST00000269228 RBM33Q96EV2 1170 aaKnown RBP16.92■□□□□ 0.3
NPC1-201ENST00000269228 ST18O60284 1047 aa16.92■□□□□ 0.3
NPC1-201ENST00000269228 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
NPC1-201ENST00000269228 PDE4AP27815 886 aa16.92■□□□□ 0.3
NPC1-201ENST00000269228 NUP153P49790 1475 aaKnown RBP16.92■□□□□ 0.3
NPC1-201ENST00000269228 ZC3H6P61129 1189 aaKnown RBP16.91■□□□□ 0.3
NPC1-201ENST00000269228 ZNF530Q6P9A1 599 aaPredicted RBP16.91■□□□□ 0.3
NPC1-201ENST00000269228 TSR2Q969E8 191 aaKnown RBP16.91■□□□□ 0.3
NPC1-201ENST00000269228 GOLGA6L6A8MZA4 724 aa16.91■□□□□ 0.3
NPC1-201ENST00000269228 DEKP35659 375 aaKnown RBP16.91■□□□□ 0.3
NPC1-201ENST00000269228 DDX54Q8TDD1 881 aaKnown RBP16.91■□□□□ 0.3
NPC1-201ENST00000269228 AMOTL2Q9Y2J4 779 aa16.91■□□□□ 0.3
NPC1-201ENST00000269228 NSD3Q9BZ95 1437 aa16.91■□□□□ 0.3
NPC1-201ENST00000269228 CCDC30Q5VVM6 783 aa16.9■□□□□ 0.3
NPC1-201ENST00000269228 PLCH2O75038 1416 aa16.9■□□□□ 0.3
NPC1-201ENST00000269228 TWISTNBQ3B726 338 aaPredicted RBP16.9■□□□□ 0.3
NPC1-201ENST00000269228 PNISRQ8TF01 805 aaKnown RBP16.9■□□□□ 0.3
NPC1-201ENST00000269228 UBTFL1P0CB47 393 aaPredicted RBP16.89■□□□□ 0.3
NPC1-201ENST00000269228 KIF21AQ7Z4S6 1674 aa16.89■□□□□ 0.29
NPC1-201ENST00000269228 LNPKQ9C0E8 428 aa16.89■□□□□ 0.29
NPC1-201ENST00000269228 IPO9Q96P70 1041 aaKnown RBP16.89■□□□□ 0.29
NPC1-201ENST00000269228 HTATSF1O43719 755 aaKnown RBP16.88■□□□□ 0.29
NPC1-201ENST00000269228 VPS37DQ86XT2 251 aa16.88■□□□□ 0.29
NPC1-201ENST00000269228 GZF1Q9H116 711 aaPredicted RBP16.88■□□□□ 0.29
NPC1-201ENST00000269228 PPP6R1Q9UPN7 881 aa16.88■□□□□ 0.29
NPC1-201ENST00000269228 ADAMTS12P58397 1594 aa16.88■□□□□ 0.29
NPC1-201ENST00000269228 NOS1P29475 1434 aa16.87■□□□□ 0.29
NPC1-201ENST00000269228 CCDC184Q52MB2 194 aa16.87■□□□□ 0.29
NPC1-201ENST00000269228 NRDCO43847 1150 aa16.87■□□□□ 0.29
NPC1-201ENST00000269228 LRRFIP1Q32MZ4 808 aaKnown RBP16.87■□□□□ 0.29
NPC1-201ENST00000269228 FAM177BA6PVY3 158 aa16.86■□□□□ 0.29
NPC1-201ENST00000269228 FAM135AQ9P2D6 1515 aa16.86■□□□□ 0.29
NPC1-201ENST00000269228 CLSTN1O94985 981 aa16.86■□□□□ 0.29
NPC1-201ENST00000269228 HSP90AB4PQ58FF6 505 aa16.86■□□□□ 0.29
NPC1-201ENST00000269228 RUFY2Q8WXA3 655 aa16.86■□□□□ 0.29
NPC1-201ENST00000269228 PHF23Q9BUL5 403 aaPredicted RBP16.86■□□□□ 0.29
NPC1-201ENST00000269228 CABP4P57796 275 aa16.85■□□□□ 0.29
NPC1-201ENST00000269228 FOXD4L5Q5VV16 416 aaPredicted RBP16.85■□□□□ 0.29
NPC1-201ENST00000269228 FOXD4L4Q8WXT5 416 aaPredicted RBP16.85■□□□□ 0.29
NPC1-201ENST00000269228 NEUROD6Q96NK8 337 aa16.85■□□□□ 0.29
NPC1-201ENST00000269228 KDM5BQ9UGL1 1544 aa16.85■□□□□ 0.29
NPC1-201ENST00000269228 C11orf95C9JLR9 678 aaPredicted RBP16.85■□□□□ 0.29
NPC1-201ENST00000269228 HDGFL1Q5TGJ6 251 aa16.85■□□□□ 0.29
NPC1-201ENST00000269228 SPG7Q9UQ90 795 aa16.85■□□□□ 0.29
NPC1-201ENST00000269228 FOXO3O43524 673 aa16.84■□□□□ 0.29
NPC1-201ENST00000269228 WDR7Q9Y4E6 1490 aa16.84■□□□□ 0.29
NPC1-201ENST00000269228 SLC4A2P04920 1241 aa16.84■□□□□ 0.29
NPC1-201ENST00000269228 APPP05067 770 aa16.84■□□□□ 0.29
NPC1-201ENST00000269228 DRC7Q8IY82 874 aa16.83■□□□□ 0.29
NPC1-201ENST00000269228 NME9Q86XW9 330 aa16.83■□□□□ 0.29
NPC1-201ENST00000269228 KLHL34Q8N239 644 aa16.83■□□□□ 0.29
NPC1-201ENST00000269228 EIF4G3O43432 1585 aaKnown RBP16.83■□□□□ 0.28
NPC1-201ENST00000269228 WASLO00401 505 aaPredicted RBP16.83■□□□□ 0.28
NPC1-201ENST00000269228 REC8O95072 547 aa16.83■□□□□ 0.28
NPC1-201ENST00000269228 NOL10Q9BSC4 688 aaKnown RBP16.83■□□□□ 0.28
NPC1-201ENST00000269228 UGGT2Q9NYU1 1516 aa16.83■□□□□ 0.28
NPC1-201ENST00000269228 FBXW7Q969H0 707 aa16.83■□□□□ 0.28
NPC1-201ENST00000269228 PHF8Q9UPP1 1060 aa16.83■□□□□ 0.28
NPC1-201ENST00000269228 KIAA0556O60303 1618 aa16.82■□□□□ 0.28
NPC1-201ENST00000269228 CTTNBP2Q8WZ74 1663 aa16.82■□□□□ 0.28
NPC1-201ENST00000269228 GNAI3P08754 354 aa16.82■□□□□ 0.28
NPC1-201ENST00000269228 KCNH5Q8NCM2 988 aa16.82■□□□□ 0.28
NPC1-201ENST00000269228 FCHSD2O94868 740 aa16.82■□□□□ 0.28
NPC1-201ENST00000269228 KIF3AQ9Y496 699 aa16.82■□□□□ 0.28
NPC1-201ENST00000269228 SYCP2Q9BX26 1530 aa16.81■□□□□ 0.28
NPC1-201ENST00000269228 BCAR3O75815 825 aa16.81■□□□□ 0.28
NPC1-201ENST00000269228 PTMSP20962 102 aa16.81■□□□□ 0.28
NPC1-201ENST00000269228 C14orf93Q9H972 538 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms