RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 TCP11L2Q8N4U5 519 aa21.92■■□□□ 1.1
SPG7-201ENST00000268704 RARSP54136 660 aaKnown RBP21.92■■□□□ 1.1
SPG7-201ENST00000268704 VWDEQ8N2E2 1590 aa21.91■■□□□ 1.1
SPG7-201ENST00000268704 MAPK8IP3Q9UPT6 1336 aa21.9■■□□□ 1.1
SPG7-201ENST00000268704 KIF1BO60333 1816 aa21.9■■□□□ 1.1
SPG7-201ENST00000268704 MYOM2P54296 1465 aa21.9■■□□□ 1.1
SPG7-201ENST00000268704 NLRP1Q9C000 1473 aa21.9■■□□□ 1.1
SPG7-201ENST00000268704 MROH1Q8NDA8 1641 aa21.89■■□□□ 1.09
SPG7-201ENST00000268704 INO80Q9ULG1 1556 aaPredicted RBP21.89■■□□□ 1.09
SPG7-201ENST00000268704 POGKQ9P215 609 aa21.88■■□□□ 1.09
SPG7-201ENST00000268704 NOS1P29475 1434 aa21.88■■□□□ 1.09
SPG7-201ENST00000268704 CFAP65Q6ZU64 1925 aaKnown RBP21.88■■□□□ 1.09
SPG7-201ENST00000268704 FANCAO15360 1455 aa21.88■■□□□ 1.09
SPG7-201ENST00000268704 TMEM132EQ6IEE7 984 aa21.88■■□□□ 1.09
SPG7-201ENST00000268704 RUNDC1Q96C34 613 aa21.87■■□□□ 1.09
SPG7-201ENST00000268704 IFT172Q9UG01 1749 aa21.87■■□□□ 1.09
SPG7-201ENST00000268704 NINLQ9Y2I6 1382 aa21.86■■□□□ 1.09
SPG7-201ENST00000268704 MTHFSP49914 203 aa21.86■■□□□ 1.09
SPG7-201ENST00000268704 NGEFQ8N5V2 710 aa21.86■■□□□ 1.09
SPG7-201ENST00000268704 PDZRN3Q9UPQ7 1066 aa21.85■■□□□ 1.09
SPG7-201ENST00000268704 IQSEC2Q5JU85 1478 aa21.85■■□□□ 1.09
SPG7-201ENST00000268704 UHRF1BP1LA0JNW5 1464 aa21.84■■□□□ 1.09
SPG7-201ENST00000268704 PPRC1Q5VV67 1664 aaKnown RBP21.83■■□□□ 1.09
SPG7-201ENST00000268704 MYO3AQ8NEV4 1616 aa21.83■■□□□ 1.09
SPG7-201ENST00000268704 EFCAB6Q5THR3 1501 aa21.82■■□□□ 1.08
SPG7-201ENST00000268704 UBE2Q2Q8WVN8 375 aa21.82■■□□□ 1.08
SPG7-201ENST00000268704 ADGRL1O94910 1474 aa21.82■■□□□ 1.08
SPG7-201ENST00000268704 SPRYD3Q8NCJ5 442 aa21.82■■□□□ 1.08
SPG7-201ENST00000268704 SENP3Q9H4L4 574 aaPredicted RBP21.82■■□□□ 1.08
SPG7-201ENST00000268704 SLC24A1O60721 1099 aa21.81■■□□□ 1.08
SPG7-201ENST00000268704 BECN1Q14457 450 aa21.81■■□□□ 1.08
SPG7-201ENST00000268704 NUTM2DQ5VT03 806 aaPredicted RBP21.81■■□□□ 1.08
SPG7-201ENST00000268704 PMFBP1Q8TBY8 1022 aa21.81■■□□□ 1.08
SPG7-201ENST00000268704 QRICH2Q9H0J4 1663 aa21.81■■□□□ 1.08
SPG7-201ENST00000268704 PHF23Q9BUL5 403 aaPredicted RBP21.8■■□□□ 1.08
SPG7-201ENST00000268704 SBNO2Q9Y2G9 1366 aa21.8■■□□□ 1.08
SPG7-201ENST00000268704 NEURL4Q96JN8 1562 aa21.8■■□□□ 1.08
SPG7-201ENST00000268704 NRXN1Q9ULB1 1477 aa21.8■■□□□ 1.08
SPG7-201ENST00000268704 ARAP3Q8WWN8 1544 aa21.79■■□□□ 1.08
SPG7-201ENST00000268704 ABCA9Q8IUA7 1624 aa21.79■■□□□ 1.08
SPG7-201ENST00000268704 TSR2Q969E8 191 aaKnown RBP21.78■■□□□ 1.08
SPG7-201ENST00000268704 TBC1D32Q96NH3 1257 aa21.78■■□□□ 1.08
SPG7-201ENST00000268704 U2AF1L5P0DN76 240 aaPredicted RBP21.77■■□□□ 1.08
SPG7-201ENST00000268704 U2AF1Q01081 240 aaKnown RBP eCLIP21.77■■□□□ 1.084e-9■■□□□ 12.5
SPG7-201ENST00000268704 ARXQ96QS3 562 aa21.77■■□□□ 1.08
SPG7-201ENST00000268704 TBC1D2Q9BYX2 928 aa21.77■■□□□ 1.08
SPG7-201ENST00000268704 ZNF518AQ6AHZ1 1483 aa21.77■■□□□ 1.08
SPG7-201ENST00000268704 WDR63Q8IWG1 891 aa21.77■■□□□ 1.08
SPG7-201ENST00000268704 ANTXR1Q9H6X2 564 aa21.77■■□□□ 1.08
SPG7-201ENST00000268704 ZC3H13Q5T200 1668 aaKnown RBP21.77■■□□□ 1.08
SPG7-201ENST00000268704 UPF2Q9HAU5 1272 aaKnown RBP21.75■■□□□ 1.07
SPG7-201ENST00000268704 NPM1P06748 294 aaKnown RBP eCLIP21.75■■□□□ 1.07
SPG7-201ENST00000268704 ADGRB3O60242 1522 aa21.75■■□□□ 1.07
SPG7-201ENST00000268704 SAFB2Q14151 953 aaKnown RBP eCLIP21.74■■□□□ 1.075e-8■□□□□ 11
SPG7-201ENST00000268704 MVPQ14764 893 aaKnown RBP21.73■■□□□ 1.07
SPG7-201ENST00000268704 CFAP53Q96M91 514 aa21.73■■□□□ 1.07
SPG7-201ENST00000268704 RWDD1Q9H446 243 aaPredicted RBP21.73■■□□□ 1.07
SPG7-201ENST00000268704 C14orf93Q9H972 538 aaKnown RBP21.73■■□□□ 1.07
SPG7-201ENST00000268704 KIDINS220Q9ULH0 1771 aa21.72■■□□□ 1.07
SPG7-201ENST00000268704 FTSJ3Q8IY81 847 aaKnown RBP21.72■■□□□ 1.07
SPG7-201ENST00000268704 ADGRB1O14514 1584 aa21.72■■□□□ 1.07
SPG7-201ENST00000268704 SETBP1Q9Y6X0 1596 aa21.72■■□□□ 1.07
SPG7-201ENST00000268704 GGT6Q6P531 493 aa21.72■■□□□ 1.07
SPG7-201ENST00000268704 MYH16Q9H6N6 1097 aa21.71■■□□□ 1.07
SPG7-201ENST00000268704 PPLO60437 1756 aa21.7■■□□□ 1.06
SPG7-201ENST00000268704 CABP2Q9NPB3 220 aa21.7■■□□□ 1.06
SPG7-201ENST00000268704 NPATQ14207 1427 aa21.69■■□□□ 1.06
SPG7-201ENST00000268704 MFAP1P55081 439 aaKnown RBP21.69■■□□□ 1.06
SPG7-201ENST00000268704 CCDC27Q2M243 656 aa21.69■■□□□ 1.06
SPG7-201ENST00000268704 ZKSCAN2Q63HK3 967 aa21.69■■□□□ 1.06
SPG7-201ENST00000268704 DZIP1LQ8IYY4 767 aaKnown RBP21.69■■□□□ 1.06
SPG7-201ENST00000268704 SMC4Q9NTJ3 1288 aa21.69■■□□□ 1.06
SPG7-201ENST00000268704 U2SURPO15042 1029 aaKnown RBP21.68■■□□□ 1.06
SPG7-201ENST00000268704 EXOSC9Q06265 439 aaKnown RBP21.68■■□□□ 1.06
SPG7-201ENST00000268704 TRIM27P14373 513 aa21.66■■□□□ 1.06
SPG7-201ENST00000268704 AAMPQ13685 434 aa21.66■■□□□ 1.06
SPG7-201ENST00000268704 ITPRIPQ8IWB1 547 aa21.66■■□□□ 1.06
SPG7-201ENST00000268704 TULP4Q9NRJ4 1543 aa21.66■■□□□ 1.06
SPG7-201ENST00000268704 USP32Q8NFA0 1604 aa21.65■■□□□ 1.06
SPG7-201ENST00000268704 GZF1Q9H116 711 aaPredicted RBP21.65■■□□□ 1.06
SPG7-201ENST00000268704 SSH1Q8WYL5 1049 aa21.64■■□□□ 1.06
SPG7-201ENST00000268704 GGNBP2Q9H3C7 697 aa21.64■■□□□ 1.06
SPG7-201ENST00000268704 CD109Q6YHK3 1445 aa21.64■■□□□ 1.05
SPG7-201ENST00000268704 GLI2P10070 1586 aa21.63■■□□□ 1.05
SPG7-201ENST00000268704 FAM43AQ8N2R8 423 aa21.63■■□□□ 1.05
SPG7-201ENST00000268704 C22orf23Q9BZE7 217 aa21.63■■□□□ 1.05
SPG7-201ENST00000268704 ANKRD36BQ8N2N9 1353 aa21.63■■□□□ 1.05
SPG7-201ENST00000268704 ADGRB2O60241 1585 aa21.63■■□□□ 1.05
SPG7-201ENST00000268704 EVC2Q86UK5 1308 aa21.63■■□□□ 1.05
SPG7-201ENST00000268704 LMTK2Q8IWU2 1503 aa21.62■■□□□ 1.05
SPG7-201ENST00000268704 TRIM35Q9UPQ4 493 aa21.61■■□□□ 1.05
SPG7-201ENST00000268704 ZMYM3Q14202 1370 aa21.61■■□□□ 1.05
SPG7-201ENST00000268704 STK26Q9P289 416 aa21.61■■□□□ 1.05
SPG7-201ENST00000268704 ASXL2Q76L83 1435 aa21.6■■□□□ 1.05
SPG7-201ENST00000268704 ARHGEF28Q8N1W1 1705 aaKnown RBP21.6■■□□□ 1.05
SPG7-201ENST00000268704 TMPOP42166 694 aaKnown RBP21.6■■□□□ 1.05
SPG7-201ENST00000268704 NOB1Q9ULX3 412 aaKnown RBP21.6■■□□□ 1.05
SPG7-201ENST00000268704 PLEKHF1Q96S99 279 aa21.59■■□□□ 1.05
SPG7-201ENST00000268704 A0A1W2PP64 1363 aa21.59■■□□□ 1.05
SPG7-201ENST00000268704 RRAGDQ9NQL2 400 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms