RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 EFCAB6Q5THR3 1501 aa28.57■■■□□ 2.16
CDR2-201ENST00000268383 CGNL1Q0VF96 1302 aa28.57■■■□□ 2.16
CDR2-201ENST00000268383 PDE3AQ14432 1141 aa28.57■■■□□ 2.16
CDR2-201ENST00000268383 SAFB2Q14151 953 aaKnown RBP eCLIP28.56■■■□□ 2.16
CDR2-201ENST00000268383 IFT172Q9UG01 1749 aa28.56■■■□□ 2.16
CDR2-201ENST00000268383 USP19O94966 1318 aa28.56■■■□□ 2.16
CDR2-201ENST00000268383 RARSP54136 660 aaKnown RBP28.55■■■□□ 2.16
CDR2-201ENST00000268383 GSE1Q14687 1217 aa28.55■■■□□ 2.16
CDR2-201ENST00000268383 RUNDC1Q96C34 613 aa28.55■■■□□ 2.16
CDR2-201ENST00000268383 BRPF3Q9ULD4 1205 aa28.54■■■□□ 2.16
CDR2-201ENST00000268383 SHPRHQ149N8 1683 aa28.54■■■□□ 2.16
CDR2-201ENST00000268383 SLC24A1O60721 1099 aa28.53■■■□□ 2.16
CDR2-201ENST00000268383 PCDHB15Q9Y5E8 787 aa28.53■■■□□ 2.16
CDR2-201ENST00000268383 KIDINS220Q9ULH0 1771 aa28.52■■■□□ 2.16
CDR2-201ENST00000268383 C14orf93Q9H972 538 aaKnown RBP28.51■■■□□ 2.15
CDR2-201ENST00000268383 NRXN1Q9ULB1 1477 aa28.51■■■□□ 2.15
CDR2-201ENST00000268383 ASXL2Q76L83 1435 aa28.49■■■□□ 2.15
CDR2-201ENST00000268383 SBNO2Q9Y2G9 1366 aa28.48■■■□□ 2.15
CDR2-201ENST00000268383 NPATQ14207 1427 aa28.48■■■□□ 2.15
CDR2-201ENST00000268383 NEURL4Q96JN8 1562 aa28.47■■■□□ 2.15
CDR2-201ENST00000268383 MYO3AQ8NEV4 1616 aa28.47■■■□□ 2.15
CDR2-201ENST00000268383 CABP2Q9NPB3 220 aa28.47■■■□□ 2.15
CDR2-201ENST00000268383 QRICH2Q9H0J4 1663 aa28.46■■■□□ 2.15
CDR2-201ENST00000268383 NGEFQ8N5V2 710 aa28.46■■■□□ 2.15
CDR2-201ENST00000268383 U2AF1L5P0DN76 240 aaPredicted RBP28.46■■■□□ 2.15
CDR2-201ENST00000268383 U2AF1Q01081 240 aaKnown RBP eCLIP28.46■■■□□ 2.15
CDR2-201ENST00000268383 ADGRB3O60242 1522 aa28.45■■■□□ 2.15
CDR2-201ENST00000268383 TSR2Q969E8 191 aaKnown RBP28.43■■■□□ 2.14
CDR2-201ENST00000268383 SLKQ9H2G2 1235 aaPredicted RBP28.43■■■□□ 2.14
CDR2-201ENST00000268383 PHF23Q9BUL5 403 aaPredicted RBP28.42■■■□□ 2.14
CDR2-201ENST00000268383 IQSEC2Q5JU85 1478 aa28.42■■■□□ 2.14
CDR2-201ENST00000268383 ZNF518AQ6AHZ1 1483 aa28.42■■■□□ 2.14
CDR2-201ENST00000268383 PDZRN3Q9UPQ7 1066 aa28.42■■■□□ 2.14
CDR2-201ENST00000268383 ADGRB1O14514 1584 aa28.41■■■□□ 2.14
CDR2-201ENST00000268383 STK26Q9P289 416 aa28.4■■■□□ 2.14
CDR2-201ENST00000268383 MAPK8IP3Q9UPT6 1336 aa28.4■■■□□ 2.14
CDR2-201ENST00000268383 ANO8Q9HCE9 1232 aaPredicted RBP28.4■■■□□ 2.14
CDR2-201ENST00000268383 CFAP53Q96M91 514 aa28.39■■■□□ 2.13
CDR2-201ENST00000268383 VIRMAQ69YN4 1812 aaKnown RBP28.38■■■□□ 2.13
CDR2-201ENST00000268383 PPLO60437 1756 aa28.38■■■□□ 2.13
CDR2-201ENST00000268383 WDR63Q8IWG1 891 aa28.38■■■□□ 2.13
CDR2-201ENST00000268383 ZC3H13Q5T200 1668 aaKnown RBP28.38■■■□□ 2.13
CDR2-201ENST00000268383 SETBP1Q9Y6X0 1596 aa28.37■■■□□ 2.13
CDR2-201ENST00000268383 NINLQ9Y2I6 1382 aa28.37■■■□□ 2.13
CDR2-201ENST00000268383 U2SURPO15042 1029 aaKnown RBP28.36■■■□□ 2.13
CDR2-201ENST00000268383 GGNBP2Q9H3C7 697 aa28.35■■■□□ 2.13
CDR2-201ENST00000268383 PMFBP1Q8TBY8 1022 aa28.35■■■□□ 2.13
CDR2-201ENST00000268383 LMTK2Q8IWU2 1503 aa28.33■■■□□ 2.13
CDR2-201ENST00000268383 EVC2Q86UK5 1308 aa28.32■■■□□ 2.12
CDR2-201ENST00000268383 NLRP1Q9C000 1473 aa28.32■■■□□ 2.12
CDR2-201ENST00000268383 RAPGEF3O95398 923 aa28.32■■■□□ 2.12
CDR2-201ENST00000268383 FRMPD1Q5SYB0 1578 aa28.32■■■□□ 2.12
CDR2-201ENST00000268383 SPRYD3Q8NCJ5 442 aa28.31■■■□□ 2.12
CDR2-201ENST00000268383 TULP4Q9NRJ4 1543 aa28.31■■■□□ 2.12
CDR2-201ENST00000268383 MYH16Q9H6N6 1097 aa28.3■■■□□ 2.12
CDR2-201ENST00000268383 EXOSC9Q06265 439 aaKnown RBP28.29■■■□□ 2.12
CDR2-201ENST00000268383 FTSJ3Q8IY81 847 aaKnown RBP28.29■■■□□ 2.12
CDR2-201ENST00000268383 SRPK2P78362 688 aaKnown RBP28.28■■■□□ 2.12
CDR2-201ENST00000268383 MVPQ14764 893 aaKnown RBP28.28■■■□□ 2.12
CDR2-201ENST00000268383 CCDC27Q2M243 656 aa28.28■■■□□ 2.12
CDR2-201ENST00000268383 GLI2P10070 1586 aa28.28■■■□□ 2.12
CDR2-201ENST00000268383 ANKRD36BQ8N2N9 1353 aa28.27■■■□□ 2.12
CDR2-201ENST00000268383 POGKQ9P215 609 aa28.27■■■□□ 2.12
CDR2-201ENST00000268383 RWDD1Q9H446 243 aaPredicted RBP28.27■■■□□ 2.12
CDR2-201ENST00000268383 SMC4Q9NTJ3 1288 aa28.27■■■□□ 2.12
CDR2-201ENST00000268383 ZKSCAN2Q63HK3 967 aa28.26■■■□□ 2.11
CDR2-201ENST00000268383 DZIP1LQ8IYY4 767 aaKnown RBP28.25■■■□□ 2.11
CDR2-201ENST00000268383 SIGLEC1Q9BZZ2 1709 aa28.25■■■□□ 2.11
CDR2-201ENST00000268383 CD109Q6YHK3 1445 aa28.25■■■□□ 2.11
CDR2-201ENST00000268383 A0A1W2PP64 1363 aa28.24■■■□□ 2.11
CDR2-201ENST00000268383 NPM1P06748 294 aaKnown RBP eCLIP28.24■■■□□ 2.11
CDR2-201ENST00000268383 MINK1Q8N4C8 1332 aaPredicted RBP28.24■■■□□ 2.11
CDR2-201ENST00000268383 BECN1Q14457 450 aa28.24■■■□□ 2.11
CDR2-201ENST00000268383 POGZQ7Z3K3 1410 aa28.23■■■□□ 2.11
CDR2-201ENST00000268383 IDI1Q13907 227 aa28.23■■■□□ 2.11
CDR2-201ENST00000268383 VGFO15240 615 aaPredicted RBP28.23■■■□□ 2.11
CDR2-201ENST00000268383 SSH1Q8WYL5 1049 aa28.23■■■□□ 2.11
CDR2-201ENST00000268383 RPGRIP1LQ68CZ1 1315 aa28.23■■■□□ 2.11
CDR2-201ENST00000268383 TRIM27P14373 513 aa28.22■■■□□ 2.11
CDR2-201ENST00000268383 TBC1D32Q96NH3 1257 aa28.22■■■□□ 2.11
CDR2-201ENST00000268383 TRIM35Q9UPQ4 493 aa28.22■■■□□ 2.11
CDR2-201ENST00000268383 ABCC3O15438 1527 aa28.22■■■□□ 2.11
CDR2-201ENST00000268383 FBLN1P23142 703 aa28.22■■■□□ 2.11
CDR2-201ENST00000268383 TMPOP42166 694 aaKnown RBP28.22■■■□□ 2.11
CDR2-201ENST00000268383 TBC1D2Q9BYX2 928 aa28.22■■■□□ 2.11
CDR2-201ENST00000268383 ITPRIPQ8IWB1 547 aa28.21■■■□□ 2.11
CDR2-201ENST00000268383 ARHGEF28Q8N1W1 1705 aaKnown RBP28.21■■■□□ 2.11
CDR2-201ENST00000268383 PLEKHF1Q96S99 279 aa28.21■■■□□ 2.11
CDR2-201ENST00000268383 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.2■■■□□ 2.11
CDR2-201ENST00000268383 UPF2Q9HAU5 1272 aaKnown RBP28.2■■■□□ 2.1
CDR2-201ENST00000268383 CAMSAP1Q5T5Y3 1602 aa28.19■■■□□ 2.1
CDR2-201ENST00000268383 USP32Q8NFA0 1604 aa28.19■■■□□ 2.1
CDR2-201ENST00000268383 NOB1Q9ULX3 412 aaKnown RBP28.18■■■□□ 2.1
CDR2-201ENST00000268383 HECW2Q9P2P5 1572 aa28.17■■■□□ 2.1
CDR2-201ENST00000268383 MFAP1P55081 439 aaKnown RBP28.17■■■□□ 2.1
CDR2-201ENST00000268383 ANTXR1Q9H6X2 564 aa28.17■■■□□ 2.1
CDR2-201ENST00000268383 FYB1O15117 783 aa28.16■■■□□ 2.1
CDR2-201ENST00000268383 NEXMIFQ5QGS0 1516 aa28.15■■■□□ 2.1
CDR2-201ENST00000268383 ARXQ96QS3 562 aa28.15■■■□□ 2.1
CDR2-201ENST00000268383 RIPK4P57078 832 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms