RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 PDZRN3Q9UPQ7 1066 aa21.67■■□□□ 1.06
RTN1-201ENST00000267484 SPRYD3Q8NCJ5 442 aa21.66■■□□□ 1.06
RTN1-201ENST00000267484 SAFB2Q14151 953 aaKnown RBP eCLIP21.65■■□□□ 1.06
RTN1-201ENST00000267484 MYOM2P54296 1465 aa21.65■■□□□ 1.06
RTN1-201ENST00000267484 MROH2AA6NES4 1674 aa21.65■■□□□ 1.06
RTN1-201ENST00000267484 KIAA1210Q9ULL0 1709 aa21.65■■□□□ 1.06
RTN1-201ENST00000267484 VWDEQ8N2E2 1590 aa21.64■■□□□ 1.06
RTN1-201ENST00000267484 GGT6Q6P531 493 aa21.64■■□□□ 1.05
RTN1-201ENST00000267484 NGEFQ8N5V2 710 aa21.64■■□□□ 1.05
RTN1-201ENST00000267484 ADGRL1O94910 1474 aa21.64■■□□□ 1.05
RTN1-201ENST00000267484 U2AF1L5P0DN76 240 aaPredicted RBP21.63■■□□□ 1.05
RTN1-201ENST00000267484 U2AF1Q01081 240 aaKnown RBP eCLIP21.63■■□□□ 1.05
RTN1-201ENST00000267484 SLC24A1O60721 1099 aa21.63■■□□□ 1.05
RTN1-201ENST00000267484 TSR2Q969E8 191 aaKnown RBP21.63■■□□□ 1.05
RTN1-201ENST00000267484 MROH1Q8NDA8 1641 aa21.62■■□□□ 1.05
RTN1-201ENST00000267484 UHRF1BP1LA0JNW5 1464 aa21.62■■□□□ 1.05
RTN1-201ENST00000267484 SHPRHQ149N8 1683 aa21.62■■□□□ 1.05
RTN1-201ENST00000267484 PMFBP1Q8TBY8 1022 aa21.61■■□□□ 1.05
RTN1-201ENST00000267484 ARXQ96QS3 562 aa21.61■■□□□ 1.05
RTN1-201ENST00000267484 INO80Q9ULG1 1556 aaPredicted RBP21.61■■□□□ 1.05
RTN1-201ENST00000267484 NLRP1Q9C000 1473 aa21.6■■□□□ 1.05
RTN1-201ENST00000267484 KIF1BO60333 1816 aa21.6■■□□□ 1.05
RTN1-201ENST00000267484 BECN1Q14457 450 aa21.6■■□□□ 1.05
RTN1-201ENST00000267484 NINLQ9Y2I6 1382 aa21.6■■□□□ 1.05
RTN1-201ENST00000267484 PHF23Q9BUL5 403 aaPredicted RBP21.6■■□□□ 1.05
RTN1-201ENST00000267484 CABP2Q9NPB3 220 aa21.58■■□□□ 1.05
RTN1-201ENST00000267484 WDR63Q8IWG1 891 aa21.58■■□□□ 1.05
RTN1-201ENST00000267484 C14orf93Q9H972 538 aaKnown RBP21.58■■□□□ 1.04
RTN1-201ENST00000267484 VIRMAQ69YN4 1812 aaKnown RBP21.57■■□□□ 1.04
RTN1-201ENST00000267484 IQSEC2Q5JU85 1478 aa21.57■■□□□ 1.04
RTN1-201ENST00000267484 PPRC1Q5VV67 1664 aaKnown RBP21.57■■□□□ 1.04
RTN1-201ENST00000267484 CFAP53Q96M91 514 aa21.57■■□□□ 1.04
RTN1-201ENST00000267484 TBC1D2Q9BYX2 928 aa21.57■■□□□ 1.04
RTN1-201ENST00000267484 SBNO2Q9Y2G9 1366 aa21.57■■□□□ 1.04
RTN1-201ENST00000267484 EFCAB6Q5THR3 1501 aa21.57■■□□□ 1.04
RTN1-201ENST00000267484 U2SURPO15042 1029 aaKnown RBP21.55■■□□□ 1.04
RTN1-201ENST00000267484 FTSJ3Q8IY81 847 aaKnown RBP21.55■■□□□ 1.04
RTN1-201ENST00000267484 TBC1D32Q96NH3 1257 aa21.55■■□□□ 1.04
RTN1-201ENST00000267484 UPF2Q9HAU5 1272 aaKnown RBP21.55■■□□□ 1.04
RTN1-201ENST00000267484 RWDD1Q9H446 243 aaPredicted RBP21.55■■□□□ 1.04
RTN1-201ENST00000267484 NRXN1Q9ULB1 1477 aa21.54■■□□□ 1.04
RTN1-201ENST00000267484 ZNF518AQ6AHZ1 1483 aa21.54■■□□□ 1.04
RTN1-201ENST00000267484 IFT172Q9UG01 1749 aa21.54■■□□□ 1.04
RTN1-201ENST00000267484 MVPQ14764 893 aaKnown RBP21.54■■□□□ 1.04
RTN1-201ENST00000267484 ANTXR1Q9H6X2 564 aa21.54■■□□□ 1.04
RTN1-201ENST00000267484 ARAP3Q8WWN8 1544 aa21.53■■□□□ 1.04
RTN1-201ENST00000267484 MYH16Q9H6N6 1097 aa21.53■■□□□ 1.04
RTN1-201ENST00000267484 EXOSC9Q06265 439 aaKnown RBP21.52■■□□□ 1.04
RTN1-201ENST00000267484 ABCA9Q8IUA7 1624 aa21.52■■□□□ 1.04
RTN1-201ENST00000267484 SMC4Q9NTJ3 1288 aa21.52■■□□□ 1.04
RTN1-201ENST00000267484 STK26Q9P289 416 aa21.52■■□□□ 1.04
RTN1-201ENST00000267484 MFAP1P55081 439 aaKnown RBP21.52■■□□□ 1.04
RTN1-201ENST00000267484 DZIP1LQ8IYY4 767 aaKnown RBP21.52■■□□□ 1.04
RTN1-201ENST00000267484 GGNBP2Q9H3C7 697 aa21.52■■□□□ 1.04
RTN1-201ENST00000267484 ZKSCAN2Q63HK3 967 aa21.51■■□□□ 1.03
RTN1-201ENST00000267484 QRICH2Q9H0J4 1663 aa21.51■■□□□ 1.03
RTN1-201ENST00000267484 MYO3AQ8NEV4 1616 aa21.51■■□□□ 1.03
RTN1-201ENST00000267484 NPATQ14207 1427 aa21.51■■□□□ 1.03
RTN1-201ENST00000267484 ITPRIPQ8IWB1 547 aa21.49■■□□□ 1.03
RTN1-201ENST00000267484 ADGRB3O60242 1522 aa21.49■■□□□ 1.03
RTN1-201ENST00000267484 CCDC27Q2M243 656 aa21.49■■□□□ 1.03
RTN1-201ENST00000267484 NEURL4Q96JN8 1562 aa21.49■■□□□ 1.03
RTN1-201ENST00000267484 TRIM27P14373 513 aa21.48■■□□□ 1.03
RTN1-201ENST00000267484 SSH1Q8WYL5 1049 aa21.48■■□□□ 1.03
RTN1-201ENST00000267484 ADGRB1O14514 1584 aa21.48■■□□□ 1.03
RTN1-201ENST00000267484 KIDINS220Q9ULH0 1771 aa21.47■■□□□ 1.03
RTN1-201ENST00000267484 GZF1Q9H116 711 aaPredicted RBP21.47■■□□□ 1.03
RTN1-201ENST00000267484 EVC2Q86UK5 1308 aa21.46■■□□□ 1.03
RTN1-201ENST00000267484 ASXL2Q76L83 1435 aa21.45■■□□□ 1.02
RTN1-201ENST00000267484 EIF5BO60841 1220 aaKnown RBP21.45■■□□□ 1.02
RTN1-201ENST00000267484 SRPK2P78362 688 aaKnown RBP21.45■■□□□ 1.02
RTN1-201ENST00000267484 NOB1Q9ULX3 412 aaKnown RBP21.45■■□□□ 1.02
RTN1-201ENST00000267484 TMPOP42166 694 aaKnown RBP21.44■■□□□ 1.02
RTN1-201ENST00000267484 TRIM35Q9UPQ4 493 aa21.44■■□□□ 1.02
RTN1-201ENST00000267484 SETBP1Q9Y6X0 1596 aa21.44■■□□□ 1.02
RTN1-201ENST00000267484 C22orf23Q9BZE7 217 aa21.43■■□□□ 1.02
RTN1-201ENST00000267484 CD109Q6YHK3 1445 aa21.43■■□□□ 1.02
RTN1-201ENST00000267484 ANKRD36BQ8N2N9 1353 aa21.43■■□□□ 1.02
RTN1-201ENST00000267484 AAMPQ13685 434 aa21.43■■□□□ 1.02
RTN1-201ENST00000267484 ZC3H13Q5T200 1668 aaKnown RBP21.43■■□□□ 1.02
RTN1-201ENST00000267484 TMEM57Q8N5G2 664 aa21.42■■□□□ 1.02
RTN1-201ENST00000267484 TULP4Q9NRJ4 1543 aa21.42■■□□□ 1.02
RTN1-201ENST00000267484 PRKCSHP14314 528 aaPredicted RBP21.42■■□□□ 1.02
RTN1-201ENST00000267484 PLEKHF1Q96S99 279 aa21.42■■□□□ 1.02
RTN1-201ENST00000267484 FBLN1P23142 703 aa21.41■■□□□ 1.02
RTN1-201ENST00000267484 PPLO60437 1756 aa21.41■■□□□ 1.02
RTN1-201ENST00000267484 A0A1W2PP64 1363 aa21.41■■□□□ 1.02
RTN1-201ENST00000267484 ATF7IPQ6VMQ6 1270 aa21.4■■□□□ 1.02
RTN1-201ENST00000267484 MINK1Q8N4C8 1332 aaPredicted RBP21.4■■□□□ 1.02
RTN1-201ENST00000267484 RIPK4P57078 832 aa21.39■■□□□ 1.01
RTN1-201ENST00000267484 LMTK2Q8IWU2 1503 aa21.37■■□□□ 1.01
RTN1-201ENST00000267484 GLI2P10070 1586 aa21.37■■□□□ 1.01
RTN1-201ENST00000267484 LNPKQ9C0E8 428 aa21.37■■□□□ 1.01
RTN1-201ENST00000267484 RAPGEF3O95398 923 aa21.36■■□□□ 1.01
RTN1-201ENST00000267484 DDX19BQ9UMR2 479 aa21.36■■□□□ 1.01
RTN1-201ENST00000267484 MCM4P33991 863 aa21.36■■□□□ 1.01
RTN1-201ENST00000267484 VGFO15240 615 aaPredicted RBP21.36■■□□□ 1.01
RTN1-201ENST00000267484 FAM43AQ8N2R8 423 aa21.36■■□□□ 1.01
RTN1-201ENST00000267484 FYB1O15117 783 aa21.35■■□□□ 1.01
RTN1-201ENST00000267484 RRAGDQ9NQL2 400 aaPredicted RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms