RNA–Protein interactions for RNA: ENST00000267406.10

CBLN3-201, Transcript of cerebellin 3 precursor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBLN3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-201ENST00000267406 TRMT2AQ8IZ69 625 aaKnown RBP28.14■■■□□ 2.09
CBLN3-201ENST00000267406 TSPOAP1O95153 1857 aa28.14■■■□□ 2.09
CBLN3-201ENST00000267406 ZFYVE9O95405 1425 aa28.13■■■□□ 2.09
CBLN3-201ENST00000267406 SAFB2Q14151 953 aaKnown RBP eCLIP28.13■■■□□ 2.09
CBLN3-201ENST00000267406 RIMBP3CA6NJZ7 1639 aa28.13■■■□□ 2.09
CBLN3-201ENST00000267406 RIMBP3BA6NNM3 1639 aa28.13■■■□□ 2.09
CBLN3-201ENST00000267406 RIMBP3Q9UFD9 1639 aa28.13■■■□□ 2.09
CBLN3-201ENST00000267406 ERICH6Q7L0X2 663 aa28.12■■■□□ 2.09
CBLN3-201ENST00000267406 STK26Q9P289 416 aa28.12■■■□□ 2.09
CBLN3-201ENST00000267406 DIP2BQ9P265 1576 aa28.11■■■□□ 2.09
CBLN3-201ENST00000267406 CABP2Q9NPB3 220 aa28.1■■■□□ 2.09
CBLN3-201ENST00000267406 FBXO31Q5XUX0 539 aaPredicted RBP28.1■■■□□ 2.09
CBLN3-201ENST00000267406 PUS7Q96PZ0 661 aaKnown RBP28.09■■■□□ 2.09
CBLN3-201ENST00000267406 CGNL1Q0VF96 1302 aa28.09■■■□□ 2.09
CBLN3-201ENST00000267406 DMRT2Q9Y5R5 561 aa28.09■■■□□ 2.09
CBLN3-201ENST00000267406 TCERG1O14776 1098 aaKnown RBP28.07■■■□□ 2.08
CBLN3-201ENST00000267406 ANKRD36BQ8N2N9 1353 aa28.07■■■□□ 2.08
CBLN3-201ENST00000267406 NKTRP30414 1462 aaKnown RBP28.07■■■□□ 2.08
CBLN3-201ENST00000267406 BCL11AQ9H165 835 aa28.06■■■□□ 2.08
CBLN3-201ENST00000267406 E9PSI1 815 aa28.05■■■□□ 2.08
CBLN3-201ENST00000267406 MTHFSP49914 203 aa28.03■■■□□ 2.08
CBLN3-201ENST00000267406 NGEFQ8N5V2 710 aa28.03■■■□□ 2.08
CBLN3-201ENST00000267406 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.03■■■□□ 2.08
CBLN3-201ENST00000267406 PTPRMP28827 1452 aa28.02■■■□□ 2.08
CBLN3-201ENST00000267406 WWC1Q8IX03 1113 aa28■■■□□ 2.07
CBLN3-201ENST00000267406 SRPK2P78362 688 aaKnown RBP28■■■□□ 2.07
CBLN3-201ENST00000267406 SKAP1Q86WV1 359 aa28■■■□□ 2.07
CBLN3-201ENST00000267406 RUNDC1Q96C34 613 aa27.98■■■□□ 2.07
CBLN3-201ENST00000267406 CLTCQ00610 1675 aaKnown RBP27.98■■■□□ 2.07
CBLN3-201ENST00000267406 BCAR3O75815 825 aa27.98■■■□□ 2.07
CBLN3-201ENST00000267406 MINK1Q8N4C8 1332 aaPredicted RBP27.98■■■□□ 2.07
CBLN3-201ENST00000267406 YTHDC2Q9H6S0 1430 aaKnown RBP27.98■■■□□ 2.07
CBLN3-201ENST00000267406 ANP32AP39687 249 aaKnown RBP27.97■■■□□ 2.07
CBLN3-201ENST00000267406 PRAM1Q96QH2 718 aa27.97■■■□□ 2.07
CBLN3-201ENST00000267406 RRP7AQ9Y3A4 280 aaKnown RBP27.97■■■□□ 2.07
CBLN3-201ENST00000267406 NSD2O96028 1365 aa27.97■■■□□ 2.07
CBLN3-201ENST00000267406 A0A1W2PP64 1363 aa27.97■■■□□ 2.07
CBLN3-201ENST00000267406 NEUROD2Q15784 382 aa27.97■■■□□ 2.07
CBLN3-201ENST00000267406 CFAP53Q96M91 514 aa27.96■■■□□ 2.07
CBLN3-201ENST00000267406 ALKQ9UM73 1620 aa27.96■■■□□ 2.07
CBLN3-201ENST00000267406 IQSEC2Q5JU85 1478 aa27.96■■■□□ 2.07
CBLN3-201ENST00000267406 MS4A1P11836 297 aa27.96■■■□□ 2.07
CBLN3-201ENST00000267406 PDE4AP27815 886 aa27.96■■■□□ 2.07
CBLN3-201ENST00000267406 STAG3Q9UJ98 1225 aa27.95■■■□□ 2.07
CBLN3-201ENST00000267406 REREQ9P2R6 1566 aa27.95■■■□□ 2.06
CBLN3-201ENST00000267406 KDM2BQ8NHM5 1336 aa27.95■■■□□ 2.06
CBLN3-201ENST00000267406 POGKQ9P215 609 aa27.95■■■□□ 2.06
CBLN3-201ENST00000267406 NOP58Q9Y2X3 529 aaKnown RBP27.95■■■□□ 2.06
CBLN3-201ENST00000267406 TCP11L2Q8N4U5 519 aa27.94■■■□□ 2.06
CBLN3-201ENST00000267406 AGLP35573 1532 aa27.93■■■□□ 2.06
CBLN3-201ENST00000267406 ABCC11Q96J66 1382 aa27.92■■■□□ 2.06
CBLN3-201ENST00000267406 NINLQ9Y2I6 1382 aa27.92■■■□□ 2.06
CBLN3-201ENST00000267406 PAK3O75914 559 aaPredicted RBP27.91■■■□□ 2.06
CBLN3-201ENST00000267406 IPO9Q96P70 1041 aaKnown RBP27.91■■■□□ 2.06
CBLN3-201ENST00000267406 BACH2Q9BYV9 841 aa27.91■■■□□ 2.06
CBLN3-201ENST00000267406 ATAD2Q6PL18 1390 aa27.89■■■□□ 2.05
CBLN3-201ENST00000267406 CENPQQ7L2Z9 268 aaPredicted RBP27.89■■■□□ 2.05
CBLN3-201ENST00000267406 GGNBP2Q9H3C7 697 aa27.89■■■□□ 2.05
CBLN3-201ENST00000267406 MLECQ14165 292 aa27.88■■■□□ 2.05
CBLN3-201ENST00000267406 CD163L1Q9NR16 1453 aa27.87■■■□□ 2.05
CBLN3-201ENST00000267406 PHF23Q9BUL5 403 aaPredicted RBP27.86■■■□□ 2.05
CBLN3-201ENST00000267406 NPM2Q86SE8 214 aaKnown RBP27.86■■■□□ 2.05
CBLN3-201ENST00000267406 PPP6R1Q9UPN7 881 aa27.86■■■□□ 2.05
CBLN3-201ENST00000267406 ANKRD26Q9UPS8 1709 aa27.85■■■□□ 2.05
CBLN3-201ENST00000267406 U2AF1L5P0DN76 240 aaPredicted RBP27.85■■■□□ 2.05
CBLN3-201ENST00000267406 U2AF1Q01081 240 aaKnown RBP eCLIP27.85■■■□□ 2.05
CBLN3-201ENST00000267406 A2ML1A8K2U0 1454 aa27.85■■■□□ 2.05
CBLN3-201ENST00000267406 SPATA31D1Q6ZQQ2 1576 aa27.85■■■□□ 2.05
CBLN3-201ENST00000267406 TERF2IPQ9NYB0 399 aa27.84■■■□□ 2.05
CBLN3-201ENST00000267406 CDK19Q9BWU1 502 aa27.84■■■□□ 2.05
CBLN3-201ENST00000267406 WDR63Q8IWG1 891 aa27.82■■■□□ 2.04
CBLN3-201ENST00000267406 ARHGEF40Q8TER5 1519 aa27.82■■■□□ 2.04
CBLN3-201ENST00000267406 FYB1O15117 783 aa27.81■■■□□ 2.04
CBLN3-201ENST00000267406 RIMS2Q9UQ26 1411 aa27.81■■■□□ 2.04
CBLN3-201ENST00000267406 CCDC27Q2M243 656 aa27.8■■■□□ 2.04
CBLN3-201ENST00000267406 SETD1AO15047 1707 aaKnown RBP27.8■■■□□ 2.04
CBLN3-201ENST00000267406 ADGRB2O60241 1585 aa27.79■■■□□ 2.04
CBLN3-201ENST00000267406 NLRP1Q9C000 1473 aa27.79■■■□□ 2.04
CBLN3-201ENST00000267406 ZBTB47Q9UFB7 747 aaPredicted RBP27.79■■■□□ 2.04
CBLN3-201ENST00000267406 CANXP27824 592 aaKnown RBP27.78■■■□□ 2.04
CBLN3-201ENST00000267406 WAPLQ7Z5K2 1190 aa27.78■■■□□ 2.04
CBLN3-201ENST00000267406 CABP1Q9NZU7 370 aa27.78■■■□□ 2.04
CBLN3-201ENST00000267406 COL3A1P02461 1466 aaPredicted RBP27.77■■■□□ 2.04
CBLN3-201ENST00000267406 HDGFL2Q7Z4V5 671 aaPredicted RBP27.77■■■□□ 2.04
CBLN3-201ENST00000267406 PDE3AQ14432 1141 aa27.76■■■□□ 2.04
CBLN3-201ENST00000267406 KIF20BQ96Q89 1820 aa27.76■■■□□ 2.04
CBLN3-201ENST00000267406 MED14O60244 1454 aa27.76■■■□□ 2.04
CBLN3-201ENST00000267406 U2SURPO15042 1029 aaKnown RBP27.76■■■□□ 2.03
CBLN3-201ENST00000267406 PANK1Q8TE04 598 aa27.76■■■□□ 2.03
CBLN3-201ENST00000267406 RARSP54136 660 aaKnown RBP27.75■■■□□ 2.03
CBLN3-201ENST00000267406 KIF13AQ9H1H9 1805 aa27.75■■■□□ 2.03
CBLN3-201ENST00000267406 DLC1Q96QB1 1528 aa27.75■■■□□ 2.03
CBLN3-201ENST00000267406 FRAT1Q92837 279 aaPredicted RBP27.74■■■□□ 2.03
CBLN3-201ENST00000267406 COG6Q9Y2V7 657 aa27.73■■■□□ 2.03
CBLN3-201ENST00000267406 NCBP3Q53F19 620 aaKnown RBP27.71■■■□□ 2.03
CBLN3-201ENST00000267406 PLEKHF1Q96S99 279 aa27.71■■■□□ 2.03
CBLN3-201ENST00000267406 NRXN3Q9Y4C0 1643 aa27.71■■■□□ 2.03
CBLN3-201ENST00000267406 MYH16Q9H6N6 1097 aa27.69■■■□□ 2.02
CBLN3-201ENST00000267406 IGHDP01880 384 aa27.69■■■□□ 2.02
CBLN3-201ENST00000267406 BCL2L13Q9BXK5 485 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms