RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 KIAA0754O94854 1291 aa12.9□□□□□ -0.34
CPT1A-201ENST00000265641 RRP7AQ9Y3A4 280 aaKnown RBP12.9□□□□□ -0.34
CPT1A-201ENST00000265641 CDCA7LQ96GN5 454 aa12.9□□□□□ -0.34
CPT1A-201ENST00000265641 MIA2Q96PC5 1412 aa12.89□□□□□ -0.35
CPT1A-201ENST00000265641 CBX1P83916 185 aa12.89□□□□□ -0.35
CPT1A-201ENST00000265641 ZHX1Q9UKY1 873 aaPredicted RBP12.89□□□□□ -0.35
CPT1A-201ENST00000265641 AQRO60306 1485 aaKnown RBP eCLIP12.89□□□□□ -0.35
CPT1A-201ENST00000265641 SF3A1Q15459 793 aaKnown RBP12.89□□□□□ -0.35
CPT1A-201ENST00000265641 PNISRQ8TF01 805 aaKnown RBP12.89□□□□□ -0.35
CPT1A-201ENST00000265641 TIAM1Q13009 1591 aa12.89□□□□□ -0.35
CPT1A-201ENST00000265641 AXDND1Q5T1B0 1012 aaPredicted RBP12.89□□□□□ -0.35
CPT1A-201ENST00000265641 FGD6Q6ZV73 1430 aa12.88□□□□□ -0.35
CPT1A-201ENST00000265641 MRC2Q9UBG0 1479 aa12.88□□□□□ -0.35
CPT1A-201ENST00000265641 TAOK2Q9UL54 1235 aa12.88□□□□□ -0.35
CPT1A-201ENST00000265641 HOOK1Q9UJC3 728 aaKnown RBP12.88□□□□□ -0.35
CPT1A-201ENST00000265641 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
CPT1A-201ENST00000265641 PRDM2Q13029 1718 aa12.88□□□□□ -0.35
CPT1A-201ENST00000265641 IPO7O95373 1038 aaKnown RBP12.87□□□□□ -0.35
CPT1A-201ENST00000265641 K7ELQ4 463 aaPredicted RBP12.87□□□□□ -0.35
CPT1A-201ENST00000265641 PRDM10Q9NQV6 1147 aa12.87□□□□□ -0.35
CPT1A-201ENST00000265641 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.87□□□□□ -0.35
CPT1A-201ENST00000265641 WDR97A6NE52 1622 aa12.87□□□□□ -0.35
CPT1A-201ENST00000265641 H3BQV1 296 aa12.87□□□□□ -0.35
CPT1A-201ENST00000265641 IFFO2Q5TF58 517 aa12.87□□□□□ -0.35
CPT1A-201ENST00000265641 CREBRFQ8IUR6 639 aa12.87□□□□□ -0.35
CPT1A-201ENST00000265641 GRIN2BQ13224 1484 aa12.87□□□□□ -0.35
CPT1A-201ENST00000265641 RTF1Q92541 710 aaKnown RBP12.87□□□□□ -0.35
CPT1A-201ENST00000265641 OFD1O75665 1012 aa12.86□□□□□ -0.35
CPT1A-201ENST00000265641 CCDC184Q52MB2 194 aa12.86□□□□□ -0.35
CPT1A-201ENST00000265641 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.86□□□□□ -0.35
CPT1A-201ENST00000265641 PLEKHH2Q8IVE3 1493 aa12.86□□□□□ -0.35
CPT1A-201ENST00000265641 CCDC192P0DO97 292 aa12.86□□□□□ -0.35
CPT1A-201ENST00000265641 TXLNBQ8N3L3 684 aa12.86□□□□□ -0.35
CPT1A-201ENST00000265641 DDX11Q96FC9 970 aa12.86□□□□□ -0.35
CPT1A-201ENST00000265641 PES1O00541 588 aaKnown RBP12.86□□□□□ -0.35
CPT1A-201ENST00000265641 RUFY2Q8WXA3 655 aa12.86□□□□□ -0.35
CPT1A-201ENST00000265641 IFT140Q96RY7 1462 aa12.86□□□□□ -0.35
CPT1A-201ENST00000265641 FOXD4L6Q3SYB3 417 aaPredicted RBP12.85□□□□□ -0.35
CPT1A-201ENST00000265641 RRP12Q5JTH9 1297 aaKnown RBP12.85□□□□□ -0.35
CPT1A-201ENST00000265641 FOXD4L3Q6VB84 417 aaPredicted RBP12.85□□□□□ -0.35
CPT1A-201ENST00000265641 C14orf37Q86TY3 774 aa12.85□□□□□ -0.35
CPT1A-201ENST00000265641 RNF214Q8ND24 703 aa12.85□□□□□ -0.35
CPT1A-201ENST00000265641 ANKRD20A12PQ8NF67 263 aa12.85□□□□□ -0.35
CPT1A-201ENST00000265641 TRIM5Q9C035 493 aa12.85□□□□□ -0.35
CPT1A-201ENST00000265641 GBP3Q9H0R5 595 aa12.85□□□□□ -0.35
CPT1A-201ENST00000265641 CCDC144AA2RUR9 1427 aa12.85□□□□□ -0.35
CPT1A-201ENST00000265641 HSP90B1P14625 803 aaKnown RBP12.85□□□□□ -0.35
CPT1A-201ENST00000265641 PANK1Q8TE04 598 aa12.85□□□□□ -0.35
CPT1A-201ENST00000265641 SMC3Q9UQE7 1217 aa12.85□□□□□ -0.35
CPT1A-201ENST00000265641 PPP4R3BQ5MIZ7 849 aa12.85□□□□□ -0.35
CPT1A-201ENST00000265641 PRPF40AO75400 957 aaKnown RBP12.84□□□□□ -0.35
CPT1A-201ENST00000265641 FEZ1Q99689 392 aa12.84□□□□□ -0.35
CPT1A-201ENST00000265641 GTF2A1P52655 376 aaPredicted RBP12.84□□□□□ -0.35
CPT1A-201ENST00000265641 TMCO3Q6UWJ1 677 aa12.84□□□□□ -0.35
CPT1A-201ENST00000265641 UVSSAQ2YD98 709 aa12.84□□□□□ -0.35
CPT1A-201ENST00000265641 CCDC73Q6ZRK6 1079 aa12.84□□□□□ -0.35
CPT1A-201ENST00000265641 FILIP1Q7Z7B0 1213 aa12.84□□□□□ -0.35
CPT1A-201ENST00000265641 BICD2Q8TD16 824 aa12.84□□□□□ -0.35
CPT1A-201ENST00000265641 STK31Q9BXU1 1019 aa12.84□□□□□ -0.35
CPT1A-201ENST00000265641 EHBP1L1Q8N3D4 1523 aa12.83□□□□□ -0.35
CPT1A-201ENST00000265641 MYOM3Q5VTT5 1437 aa12.83□□□□□ -0.36
CPT1A-201ENST00000265641 GOLGA6L7A0A1B0GV03 622 aa12.83□□□□□ -0.36
CPT1A-201ENST00000265641 LNPKQ9C0E8 428 aa12.83□□□□□ -0.36
CPT1A-201ENST00000265641 ADAMTS8Q9UP79 889 aa12.83□□□□□ -0.36
CPT1A-201ENST00000265641 NEMFO60524 1076 aa12.82□□□□□ -0.36
CPT1A-201ENST00000265641 ZRSR2Q15696 482 aaKnown RBP12.82□□□□□ -0.36
CPT1A-201ENST00000265641 KRT222Q8N1A0 295 aa12.82□□□□□ -0.36
CPT1A-201ENST00000265641 ZBTB22O15209 634 aa12.82□□□□□ -0.36
CPT1A-201ENST00000265641 RSPH4AQ5TD94 716 aa12.82□□□□□ -0.36
CPT1A-201ENST00000265641 PDZRN3Q9UPQ7 1066 aa12.82□□□□□ -0.36
CPT1A-201ENST00000265641 ERICH4A6NGS2 130 aa12.82□□□□□ -0.36
CPT1A-201ENST00000265641 SAFB2Q14151 953 aaKnown RBP eCLIP12.82□□□□□ -0.36
CPT1A-201ENST00000265641 BMS1Q14692 1282 aaKnown RBP12.82□□□□□ -0.36
CPT1A-201ENST00000265641 RBM25P49756 843 aaKnown RBP12.81□□□□□ -0.36
CPT1A-201ENST00000265641 WDR33Q9C0J8 1336 aaKnown RBP12.81□□□□□ -0.36
CPT1A-201ENST00000265641 API5Q9BZZ5 524 aaKnown RBP12.81□□□□□ -0.36
CPT1A-201ENST00000265641 INCENPQ9NQS7 918 aa12.81□□□□□ -0.36
CPT1A-201ENST00000265641 ZKSCAN1P17029 563 aaPredicted RBP12.81□□□□□ -0.36
CPT1A-201ENST00000265641 AEBP1Q8IUX7 1158 aa12.81□□□□□ -0.36
CPT1A-201ENST00000265641 PIAS4Q8N2W9 510 aaPredicted RBP12.81□□□□□ -0.36
CPT1A-201ENST00000265641 PAXBP1Q9Y5B6 917 aa12.81□□□□□ -0.36
CPT1A-201ENST00000265641 IVLP07476 585 aa12.8□□□□□ -0.36
CPT1A-201ENST00000265641 PDCP20941 246 aa12.8□□□□□ -0.36
CPT1A-201ENST00000265641 HSP90AB3PQ58FF7 597 aa12.8□□□□□ -0.36
CPT1A-201ENST00000265641 NOL10Q9BSC4 688 aaKnown RBP12.8□□□□□ -0.36
CPT1A-201ENST00000265641 TERF2IPQ9NYB0 399 aa12.8□□□□□ -0.36
CPT1A-201ENST00000265641 RUNDC1Q96C34 613 aa12.8□□□□□ -0.36
CPT1A-201ENST00000265641 PATL2C9JE40 543 aaKnown RBP12.8□□□□□ -0.36
CPT1A-201ENST00000265641 NPM3O75607 178 aaKnown RBP12.8□□□□□ -0.36
CPT1A-201ENST00000265641 HECW1Q76N89 1606 aa12.8□□□□□ -0.36
CPT1A-201ENST00000265641 RILPL2Q969X0 211 aa12.79□□□□□ -0.36
CPT1A-201ENST00000265641 DHX29Q7Z478 1369 aaKnown RBP12.79□□□□□ -0.36
CPT1A-201ENST00000265641 CLGNO14967 610 aa12.79□□□□□ -0.36
CPT1A-201ENST00000265641 SLC4A10Q6U841 1118 aa12.79□□□□□ -0.36
CPT1A-201ENST00000265641 CT47B1P0C2W7 299 aaPredicted RBP12.79□□□□□ -0.36
CPT1A-201ENST00000265641 XRCC6P12956 609 aaKnown RBP eCLIP12.79□□□□□ -0.36
CPT1A-201ENST00000265641 GCC1Q96CN9 775 aa12.79□□□□□ -0.36
CPT1A-201ENST00000265641 UBXN4Q92575 508 aa12.79□□□□□ -0.36
CPT1A-201ENST00000265641 NESP48681 1621 aa12.78□□□□□ -0.36
CPT1A-201ENST00000265641 GABPB1Q06547 395 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms