RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 MAGEC2Q9UBF1 373 aaPredicted RBP6.52□□□□□ -1.37
XRN1-201ENST00000264951 TRIM5Q9C035 493 aa6.52□□□□□ -1.37
XRN1-201ENST00000264951 DNAI2Q9GZS0 605 aa6.52□□□□□ -1.37
XRN1-201ENST00000264951 SART3Q15020 963 aaKnown RBP6.51□□□□□ -1.37
XRN1-201ENST00000264951 CETN2P41208 172 aa6.51□□□□□ -1.37
XRN1-201ENST00000264951 TUBB4BP68371 445 aa6.51□□□□□ -1.37
XRN1-201ENST00000264951 MCM5P33992 734 aa6.51□□□□□ -1.37
XRN1-201ENST00000264951 APBB1O00213 710 aa6.51□□□□□ -1.37
XRN1-201ENST00000264951 PDE4CQ08493 712 aa6.51□□□□□ -1.37
XRN1-201ENST00000264951 LRRCC1Q9C099 1032 aa6.51□□□□□ -1.37
XRN1-201ENST00000264951 FRAT2O75474 233 aaPredicted RBP6.51□□□□□ -1.37
XRN1-201ENST00000264951 TSPY26PQ9H489 355 aa6.51□□□□□ -1.37
XRN1-201ENST00000264951 ANKRD18BA2A2Z9 1011 aa6.51□□□□□ -1.37
XRN1-201ENST00000264951 DDX58O95786 925 aaKnown RBP6.51□□□□□ -1.37
XRN1-201ENST00000264951 CAVIN2O95810 425 aa6.51□□□□□ -1.37
XRN1-201ENST00000264951 CCDC146Q8IYE0 955 aa6.51□□□□□ -1.37
XRN1-201ENST00000264951 CTDP1Q9Y5B0 961 aaPredicted RBP6.51□□□□□ -1.37
XRN1-201ENST00000264951 RALYLQ86SE5 291 aaKnown RBP6.5□□□□□ -1.37
XRN1-201ENST00000264951 VPS8Q8N3P4 1428 aa6.5□□□□□ -1.37
XRN1-201ENST00000264951 TRIM34Q9BYJ4 488 aa6.5□□□□□ -1.37
XRN1-201ENST00000264951 HSPA5P11021 654 aaKnown RBP6.5□□□□□ -1.37
XRN1-201ENST00000264951 ANKRD1Q15327 319 aa6.5□□□□□ -1.37
XRN1-201ENST00000264951 IMMTQ16891 758 aaKnown RBP6.5□□□□□ -1.37
XRN1-201ENST00000264951 NEMFO60524 1076 aa6.5□□□□□ -1.37
XRN1-201ENST00000264951 SMC1AQ14683 1233 aaKnown RBP6.5□□□□□ -1.37
XRN1-201ENST00000264951 AEBP1Q8IUX7 1158 aa6.5□□□□□ -1.37
XRN1-201ENST00000264951 RRP1P56182 461 aaKnown RBP6.5□□□□□ -1.37
XRN1-201ENST00000264951 CHMP3Q9Y3E7 222 aa6.5□□□□□ -1.37
XRN1-201ENST00000264951 ENOX2Q16206 610 aaKnown RBP6.5□□□□□ -1.37
XRN1-201ENST00000264951 DZIP1LQ8IYY4 767 aaKnown RBP6.5□□□□□ -1.37
XRN1-201ENST00000264951 FYB1O15117 783 aa6.5□□□□□ -1.37
XRN1-201ENST00000264951 TUBB4AP04350 444 aa6.5□□□□□ -1.37
XRN1-201ENST00000264951 TRIM21P19474 475 aaKnown RBP6.5□□□□□ -1.37
XRN1-201ENST00000264951 SEPT11Q9NVA2 429 aaKnown RBP6.49□□□□□ -1.37
XRN1-201ENST00000264951 CCDC181Q5TID7 509 aa6.49□□□□□ -1.37
XRN1-201ENST00000264951 PPFIBP1Q86W92 1011 aa6.49□□□□□ -1.37
XRN1-201ENST00000264951 CCDC83Q8IWF9 413 aa6.49□□□□□ -1.37
XRN1-201ENST00000264951 WWC2Q6AWC2 1192 aa6.49□□□□□ -1.37
XRN1-201ENST00000264951 KIAA1328Q86T90 577 aa6.49□□□□□ -1.37
XRN1-201ENST00000264951 CRACR2AQ9BSW2 395 aa6.49□□□□□ -1.37
XRN1-201ENST00000264951 SSR1P43307 286 aaKnown RBP6.49□□□□□ -1.37
XRN1-201ENST00000264951 HMGB2P26583 209 aaKnown RBP6.49□□□□□ -1.37
XRN1-201ENST00000264951 CCAR1Q8IX12 1150 aaKnown RBP6.49□□□□□ -1.37
XRN1-201ENST00000264951 CDC45O75419 566 aa6.49□□□□□ -1.37
XRN1-201ENST00000264951 GIGYF2Q6Y7W6 1299 aaKnown RBP6.49□□□□□ -1.37
XRN1-201ENST00000264951 IFIT2P09913 472 aaKnown RBP6.49□□□□□ -1.37
XRN1-201ENST00000264951 SH3BGRP55822 239 aaPredicted RBP6.49□□□□□ -1.37
XRN1-201ENST00000264951 FAM114A1Q8IWE2 563 aa6.48□□□□□ -1.37
XRN1-201ENST00000264951 CNKSR2Q8WXI2 1034 aa6.48□□□□□ -1.37
XRN1-201ENST00000264951 RBM33Q96EV2 1170 aaKnown RBP6.48□□□□□ -1.37
XRN1-201ENST00000264951 GOLGA6L9A6NEM1 432 aa6.48□□□□□ -1.37
XRN1-201ENST00000264951 FILIP1Q7Z7B0 1213 aa6.48□□□□□ -1.37
XRN1-201ENST00000264951 ZSCAN12O43309 604 aa6.48□□□□□ -1.37
XRN1-201ENST00000264951 SMC2O95347 1197 aa6.48□□□□□ -1.37
XRN1-201ENST00000264951 SPECC1LQ69YQ0 1117 aa6.48□□□□□ -1.37
XRN1-201ENST00000264951 PLCD4Q9BRC7 762 aa6.48□□□□□ -1.37
XRN1-201ENST00000264951 C6orf163Q5TEZ5 329 aa6.48□□□□□ -1.37
XRN1-201ENST00000264951 JAKMIP3Q5VZ66 844 aa6.48□□□□□ -1.37
XRN1-201ENST00000264951 UBXN4Q92575 508 aa6.48□□□□□ -1.37
XRN1-201ENST00000264951 ANKRD45Q5TZF3 282 aa6.48□□□□□ -1.37
XRN1-201ENST00000264951 C22orf23Q9BZE7 217 aa6.48□□□□□ -1.37
XRN1-201ENST00000264951 BAZ1BQ9UIG0 1483 aaKnown RBP6.48□□□□□ -1.37
XRN1-201ENST00000264951 TMCO3Q6UWJ1 677 aa6.48□□□□□ -1.37
XRN1-201ENST00000264951 PDCL3Q9H2J4 239 aa6.48□□□□□ -1.37
XRN1-201ENST00000264951 GTF2E1P29083 439 aaPredicted RBP6.48□□□□□ -1.37
XRN1-201ENST00000264951 MEX3CQ5U5Q3 659 aaKnown RBP6.47□□□□□ -1.37
XRN1-201ENST00000264951 ANO2Q9NQ90 1003 aa6.47□□□□□ -1.37
XRN1-201ENST00000264951 VPS37CA5D8V6 355 aaPredicted RBP6.47□□□□□ -1.37
XRN1-201ENST00000264951 CEP57L1Q8IYX8 460 aa6.47□□□□□ -1.37
XRN1-201ENST00000264951 GCOM1H8Y6P7 765 aaPredicted RBP6.47□□□□□ -1.37
XRN1-201ENST00000264951 MYZAPP0CAP1 466 aa6.47□□□□□ -1.37
XRN1-201ENST00000264951 WDR33Q9C0J8 1336 aaKnown RBP6.47□□□□□ -1.37
XRN1-201ENST00000264951 SCAPERQ9BY12 1400 aa6.47□□□□□ -1.37
XRN1-201ENST00000264951 ERC1Q8IUD2 1116 aa6.47□□□□□ -1.37
XRN1-201ENST00000264951 SLC3A2P08195 630 aaKnown RBP6.47□□□□□ -1.37
XRN1-201ENST00000264951 CCDC148Q8NFR7 591 aa6.47□□□□□ -1.37
XRN1-201ENST00000264951 RILPL2Q969X0 211 aa6.47□□□□□ -1.37
XRN1-201ENST00000264951 SMTNL1A8MU46 457 aa6.47□□□□□ -1.37
XRN1-201ENST00000264951 IVLP07476 585 aa6.47□□□□□ -1.37
XRN1-201ENST00000264951 SEPT6Q14141 434 aa6.47□□□□□ -1.37
XRN1-201ENST00000264951 NFKBIBQ15653 356 aa6.47□□□□□ -1.37
XRN1-201ENST00000264951 CGNQ9P2M7 1197 aaKnown RBP6.47□□□□□ -1.37
XRN1-201ENST00000264951 ZSCAN30Q86W11 494 aa6.47□□□□□ -1.37
XRN1-201ENST00000264951 ZFYVE27Q5T4F4 411 aa6.47□□□□□ -1.37
XRN1-201ENST00000264951 TRAK2O60296 914 aa6.46□□□□□ -1.37
XRN1-201ENST00000264951 G3BP1Q13283 466 aaKnown RBP eCLIP6.46□□□□□ -1.37
XRN1-201ENST00000264951 TUBBP07437 444 aa6.46□□□□□ -1.37
XRN1-201ENST00000264951 CCDC7Q96M83 1385 aa6.46□□□□□ -1.37
XRN1-201ENST00000264951 POTEJP0CG39 1038 aa6.46□□□□□ -1.38
XRN1-201ENST00000264951 MROH2BQ7Z745 1585 aa6.46□□□□□ -1.38
XRN1-201ENST00000264951 HOOK3Q86VS8 718 aa6.46□□□□□ -1.38
XRN1-201ENST00000264951 CFAP45Q9UL16 551 aa6.46□□□□□ -1.38
XRN1-201ENST00000264951 ESPNB1AK53 854 aa6.46□□□□□ -1.38
XRN1-201ENST00000264951 TAOK3Q9H2K8 898 aa6.46□□□□□ -1.38
XRN1-201ENST00000264951 CDKL5O76039 1030 aa6.46□□□□□ -1.38
XRN1-201ENST00000264951 CSB-PGBD3P0DP91 1061 aa6.46□□□□□ -1.38
XRN1-201ENST00000264951 NFXL1Q6ZNB6 911 aa6.46□□□□□ -1.38
XRN1-201ENST00000264951 VPS36Q86VN1 386 aa6.46□□□□□ -1.38
XRN1-201ENST00000264951 PDILTQ8N807 584 aa6.46□□□□□ -1.38
XRN1-201ENST00000264951 USH1CQ9Y6N9 552 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms