RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 CCDC7Q96M83 1385 aa21.61■■□□□ 1.05
ITGA6-201ENST00000264107 DHX37Q8IY37 1157 aaKnown RBP21.61■■□□□ 1.05
ITGA6-201ENST00000264107 CDCA7LQ96GN5 454 aa21.61■■□□□ 1.05
ITGA6-201ENST00000264107 SMARCA2P51531 1590 aa21.6■■□□□ 1.05
ITGA6-201ENST00000264107 RUFY2Q8WXA3 655 aa21.6■■□□□ 1.05
ITGA6-201ENST00000264107 UBXN4Q92575 508 aa21.6■■□□□ 1.05
ITGA6-201ENST00000264107 FIBPO43427 364 aa21.6■■□□□ 1.05
ITGA6-201ENST00000264107 SDF4Q9BRK5 362 aa21.6■■□□□ 1.05
ITGA6-201ENST00000264107 CCDC102AQ96A19 550 aa21.59■■□□□ 1.05
ITGA6-201ENST00000264107 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.59■■□□□ 1.05
ITGA6-201ENST00000264107 SMAP1Q8IYB5 467 aaPredicted RBP21.59■■□□□ 1.05
ITGA6-201ENST00000264107 SMG6Q86US8 1419 aaKnown RBP21.59■■□□□ 1.05
ITGA6-201ENST00000264107 ELL2O00472 640 aaPredicted RBP21.58■■□□□ 1.05
ITGA6-201ENST00000264107 POLR3GO15318 223 aaPredicted RBP21.58■■□□□ 1.05
ITGA6-201ENST00000264107 SAFB2Q14151 953 aaKnown RBP eCLIP21.58■■□□□ 1.05
ITGA6-201ENST00000264107 NOL10Q9BSC4 688 aaKnown RBP21.58■■□□□ 1.05
ITGA6-201ENST00000264107 HDAC5Q9UQL6 1122 aa21.58■■□□□ 1.05
ITGA6-201ENST00000264107 SYCE3A1L190 88 aa21.58■■□□□ 1.04
ITGA6-201ENST00000264107 SOX12O15370 315 aa21.58■■□□□ 1.04
ITGA6-201ENST00000264107 MCM5P33992 734 aa21.58■■□□□ 1.04
ITGA6-201ENST00000264107 RSPH4AQ5TD94 716 aa21.57■■□□□ 1.04
ITGA6-201ENST00000264107 GOLGA6L7A0A1B0GV03 622 aa21.57■■□□□ 1.04
ITGA6-201ENST00000264107 NGEFQ8N5V2 710 aa21.57■■□□□ 1.04
ITGA6-201ENST00000264107 IBSPP21815 317 aaPredicted RBP21.57■■□□□ 1.04
ITGA6-201ENST00000264107 NAP1L1P55209 391 aaKnown RBP21.57■■□□□ 1.04
ITGA6-201ENST00000264107 USP47Q96K76 1375 aa21.56■■□□□ 1.04
ITGA6-201ENST00000264107 OLFM4Q6UX06 510 aa21.56■■□□□ 1.04
ITGA6-201ENST00000264107 HDGFL2Q7Z4V5 671 aaPredicted RBP21.56■■□□□ 1.04
ITGA6-201ENST00000264107 NEK4P51957 841 aa21.56■■□□□ 1.04
ITGA6-201ENST00000264107 PAXIP1Q6ZW49 1069 aaPredicted RBP21.56■■□□□ 1.04
ITGA6-201ENST00000264107 DHX8Q14562 1220 aaKnown RBP21.55■■□□□ 1.04
ITGA6-201ENST00000264107 PRIMPOLQ96LW4 560 aa21.55■■□□□ 1.04
ITGA6-201ENST00000264107 MCM2P49736 904 aa21.54■■□□□ 1.04
ITGA6-201ENST00000264107 LMOD3Q0VAK6 560 aa21.54■■□□□ 1.04
ITGA6-201ENST00000264107 CCDC94Q9BW85 323 aaPredicted RBP21.54■■□□□ 1.04
ITGA6-201ENST00000264107 SPAG9O60271 1321 aaKnown RBP21.54■■□□□ 1.04
ITGA6-201ENST00000264107 FMNL2Q96PY5 1086 aa21.54■■□□□ 1.04
ITGA6-201ENST00000264107 KIF7Q2M1P5 1343 aa21.54■■□□□ 1.04
ITGA6-201ENST00000264107 XRCC6P12956 609 aaKnown RBP eCLIP21.53■■□□□ 1.04
ITGA6-201ENST00000264107 FAM177A1Q8N128 213 aaPredicted RBP21.53■■□□□ 1.04
ITGA6-201ENST00000264107 KINO60870 393 aaKnown RBP21.52■■□□□ 1.04
ITGA6-201ENST00000264107 WASHC2AQ641Q2 1341 aa21.52■■□□□ 1.04
ITGA6-201ENST00000264107 TOP2AP11388 1531 aaKnown RBP21.52■■□□□ 1.04
ITGA6-201ENST00000264107 WIZO95785 1651 aa21.52■■□□□ 1.03
ITGA6-201ENST00000264107 FOSBP53539 338 aa21.51■■□□□ 1.03
ITGA6-201ENST00000264107 INCENPQ9NQS7 918 aa21.51■■□□□ 1.03
ITGA6-201ENST00000264107 PTPN14Q15678 1187 aa21.51■■□□□ 1.03
ITGA6-201ENST00000264107 FAM193AP78312 1265 aa21.51■■□□□ 1.03
ITGA6-201ENST00000264107 TICAM2Q86XR7 235 aa21.5■■□□□ 1.03
ITGA6-201ENST00000264107 LRRCC1Q9C099 1032 aa21.5■■□□□ 1.03
ITGA6-201ENST00000264107 TNMDQ9H2S6 317 aa21.5■■□□□ 1.03
ITGA6-201ENST00000264107 STK11IPQ8N1F8 1099 aa21.5■■□□□ 1.03
ITGA6-201ENST00000264107 DDX11Q96FC9 970 aa21.5■■□□□ 1.03
ITGA6-201ENST00000264107 TDRD9Q8NDG6 1382 aaKnown RBP21.5■■□□□ 1.03
ITGA6-201ENST00000264107 SHTN1A0MZ66 631 aa21.49■■□□□ 1.03
ITGA6-201ENST00000264107 TRIM29Q14134 588 aa21.49■■□□□ 1.03
ITGA6-201ENST00000264107 FAM107BQ9H098 131 aa21.49■■□□□ 1.03
ITGA6-201ENST00000264107 TOMM22Q9NS69 142 aa21.49■■□□□ 1.03
ITGA6-201ENST00000264107 BRD4O60885 1362 aaPredicted RBP21.49■■□□□ 1.03
ITGA6-201ENST00000264107 NUP155O75694 1391 aa21.49■■□□□ 1.03
ITGA6-201ENST00000264107 GOLGA6L10A6NI86 522 aa21.49■■□□□ 1.03
ITGA6-201ENST00000264107 KIF2AO00139 706 aaPredicted RBP21.49■■□□□ 1.03
ITGA6-201ENST00000264107 FILIP1Q7Z7B0 1213 aa21.49■■□□□ 1.03
ITGA6-201ENST00000264107 CPLX2Q6PUV4 134 aaKnown RBP21.48■■□□□ 1.03
ITGA6-201ENST00000264107 KRT222Q8N1A0 295 aa21.48■■□□□ 1.03
ITGA6-201ENST00000264107 PANK2Q9BZ23 570 aa21.48■■□□□ 1.03
ITGA6-201ENST00000264107 CPLX1O14810 134 aa21.47■■□□□ 1.03
ITGA6-201ENST00000264107 MNAT1P51948 309 aa21.47■■□□□ 1.03
ITGA6-201ENST00000264107 SYNE3Q6ZMZ3 975 aa21.47■■□□□ 1.03
ITGA6-201ENST00000264107 ZRSR2Q15696 482 aaKnown RBP21.47■■□□□ 1.03
ITGA6-201ENST00000264107 KIF18AQ8NI77 898 aa21.47■■□□□ 1.03
ITGA6-201ENST00000264107 WDR33Q9C0J8 1336 aaKnown RBP21.47■■□□□ 1.03
ITGA6-201ENST00000264107 VGLL3A8MV65 326 aa21.47■■□□□ 1.03
ITGA6-201ENST00000264107 PDS5BQ9NTI5 1447 aa21.46■■□□□ 1.03
ITGA6-201ENST00000264107 CT47A1Q5JQC4 288 aaPredicted RBP21.46■■□□□ 1.03
ITGA6-201ENST00000264107 DNAAF4Q8WXU2 420 aa21.46■■□□□ 1.03
ITGA6-201ENST00000264107 API5Q9BZZ5 524 aaKnown RBP21.46■■□□□ 1.03
ITGA6-201ENST00000264107 SMARCE1Q969G3 411 aa21.45■■□□□ 1.02
ITGA6-201ENST00000264107 PDE3AQ14432 1141 aa21.44■■□□□ 1.02
ITGA6-201ENST00000264107 TXLNBQ8N3L3 684 aa21.44■■□□□ 1.02
ITGA6-201ENST00000264107 TRIM34Q9BYJ4 488 aa21.44■■□□□ 1.02
ITGA6-201ENST00000264107 BMS1Q14692 1282 aaKnown RBP21.44■■□□□ 1.02
ITGA6-201ENST00000264107 SERPINC1P01008 464 aa21.43■■□□□ 1.02
ITGA6-201ENST00000264107 CCDC47Q96A33 483 aaKnown RBP21.43■■□□□ 1.02
ITGA6-201ENST00000264107 C16orf45Q96MC5 204 aaPredicted RBP21.43■■□□□ 1.02
ITGA6-201ENST00000264107 AKAP17AQ02040 695 aaKnown RBP21.43■■□□□ 1.02
ITGA6-201ENST00000264107 ZFP91Q96JP5 570 aaPredicted RBP21.43■■□□□ 1.02
ITGA6-201ENST00000264107 IGSF3O75054 1194 aa21.43■■□□□ 1.02
ITGA6-201ENST00000264107 LMAN1P49257 510 aa21.42■■□□□ 1.02
ITGA6-201ENST00000264107 RRAGDQ9NQL2 400 aaPredicted RBP21.42■■□□□ 1.02
ITGA6-201ENST00000264107 KIF20AO95235 890 aa21.42■■□□□ 1.02
ITGA6-201ENST00000264107 OFD1O75665 1012 aa21.41■■□□□ 1.02
ITGA6-201ENST00000264107 TNPO1Q92973 898 aaKnown RBP21.41■■□□□ 1.02
ITGA6-201ENST00000264107 GBP3Q9H0R5 595 aa21.41■■□□□ 1.02
ITGA6-201ENST00000264107 PDCP20941 246 aa21.41■■□□□ 1.02
ITGA6-201ENST00000264107 TBC1D2Q9BYX2 928 aa21.41■■□□□ 1.02
ITGA6-201ENST00000264107 WASHC2CQ9Y4E1 1318 aa21.41■■□□□ 1.02
ITGA6-201ENST00000264107 MYO6Q9UM54 1294 aa21.41■■□□□ 1.02
ITGA6-201ENST00000264107 SKAP1Q86WV1 359 aa21.4■■□□□ 1.02
ITGA6-201ENST00000264107 ROCK1Q13464 1354 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms