RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 UBAP1LF5GYI3 381 aa26.08■■□□□ 1.77
SDF4-201ENST00000263741 CDC42BPGQ6DT37 1551 aa26.07■■□□□ 1.76
SDF4-201ENST00000263741 HIRIP3Q9BW71 556 aaPredicted RBP26.06■■□□□ 1.76
SDF4-201ENST00000263741 C19orf44Q9H6X5 657 aa26.06■■□□□ 1.76
SDF4-201ENST00000263741 MINK1Q8N4C8 1332 aaPredicted RBP26.06■■□□□ 1.76
SDF4-201ENST00000263741 FMN2Q9NZ56 1722 aa26.06■■□□□ 1.76
SDF4-201ENST00000263741 RGPD8O14715 1765 aaPredicted RBP26.05■■□□□ 1.76
SDF4-201ENST00000263741 SIRT1Q96EB6 747 aa26.05■■□□□ 1.76
SDF4-201ENST00000263741 ADGRB2O60241 1585 aa26.05■■□□□ 1.76
SDF4-201ENST00000263741 DCCP43146 1447 aa26.03■■□□□ 1.76
SDF4-201ENST00000263741 PIP4K2BP78356 416 aa26.02■■□□□ 1.76
SDF4-201ENST00000263741 ATF3P18847 181 aa26.02■■□□□ 1.76
SDF4-201ENST00000263741 SCAF1Q9H7N4 1312 aaKnown RBP26.02■■□□□ 1.76
SDF4-201ENST00000263741 CENPJQ9HC77 1338 aaPredicted RBP26.01■■□□□ 1.75
SDF4-201ENST00000263741 ROBO1Q9Y6N7 1651 aa26.01■■□□□ 1.75
SDF4-201ENST00000263741 MST1RQ04912 1400 aa25.99■■□□□ 1.75
SDF4-201ENST00000263741 EIF3AQ14152 1382 aaKnown RBP25.99■■□□□ 1.75
SDF4-201ENST00000263741 NUTM2FA1L443 756 aa25.99■■□□□ 1.75
SDF4-201ENST00000263741 TOM1O60784 492 aa25.99■■□□□ 1.75
SDF4-201ENST00000263741 CADPS2Q86UW7 1296 aa25.98■■□□□ 1.75
SDF4-201ENST00000263741 USP32Q8NFA0 1604 aa25.98■■□□□ 1.75
SDF4-201ENST00000263741 USP47Q96K76 1375 aa25.98■■□□□ 1.75
SDF4-201ENST00000263741 TULP4Q9NRJ4 1543 aa25.95■■□□□ 1.75
SDF4-201ENST00000263741 SLAIN2Q9P270 581 aa25.94■■□□□ 1.74
SDF4-201ENST00000263741 FBXO41Q8TF61 875 aa25.94■■□□□ 1.74
SDF4-201ENST00000263741 C1orf167Q5SNV9 1468 aa25.93■■□□□ 1.74
SDF4-201ENST00000263741 ST20-MTHFSA0A0A6YYL1 179 aa25.91■■□□□ 1.74
SDF4-201ENST00000263741 WASLO00401 505 aaPredicted RBP25.89■■□□□ 1.73
SDF4-201ENST00000263741 ITSN1Q15811 1721 aa25.87■■□□□ 1.73
SDF4-201ENST00000263741 TOPAZ1Q8N9V7 1692 aa25.87■■□□□ 1.73
SDF4-201ENST00000263741 ORAI2Q96SN7 254 aa25.86■■□□□ 1.73
SDF4-201ENST00000263741 PRR36Q9H6K5 1346 aa25.86■■□□□ 1.73
SDF4-201ENST00000263741 ATP7BP35670 1465 aa25.86■■□□□ 1.73
SDF4-201ENST00000263741 CDK19Q9BWU1 502 aa25.86■■□□□ 1.73
SDF4-201ENST00000263741 BRINP3Q76B58 766 aa25.85■■□□□ 1.73
SDF4-201ENST00000263741 NHSL1Q5SYE7 1610 aa25.85■■□□□ 1.73
SDF4-201ENST00000263741 PHLPP1O60346 1717 aa25.84■■□□□ 1.73
SDF4-201ENST00000263741 SBNO2Q9Y2G9 1366 aa25.83■■□□□ 1.73
SDF4-201ENST00000263741 CABP2Q9NPB3 220 aa25.83■■□□□ 1.73
SDF4-201ENST00000263741 ESCO1Q5FWF5 840 aa25.83■■□□□ 1.72
SDF4-201ENST00000263741 TESK2Q96S53 571 aa25.83■■□□□ 1.72
SDF4-201ENST00000263741 ZEB1P37275 1124 aaPredicted RBP25.82■■□□□ 1.72
SDF4-201ENST00000263741 SRPK2P78362 688 aaKnown RBP25.82■■□□□ 1.72
SDF4-201ENST00000263741 ILDR1Q86SU0 546 aaPredicted RBP25.82■■□□□ 1.72
SDF4-201ENST00000263741 DDX17Q92841 729 aaKnown RBP25.82■■□□□ 1.72
SDF4-201ENST00000263741 KIF1AQ12756 1690 aa25.82■■□□□ 1.72
SDF4-201ENST00000263741 ANKARQ7Z5J8 1434 aa25.82■■□□□ 1.72
SDF4-201ENST00000263741 HSPA5P11021 654 aaKnown RBP25.81■■□□□ 1.72
SDF4-201ENST00000263741 EVC2Q86UK5 1308 aa25.8■■□□□ 1.72
SDF4-201ENST00000263741 EIF4G2P78344 907 aaKnown RBP eCLIP25.79■■□□□ 1.722e-8■■■■■ 34.8
SDF4-201ENST00000263741 AHDC1Q5TGY3 1603 aaPredicted RBP25.78■■□□□ 1.72
SDF4-201ENST00000263741 DISP3Q9P2K9 1392 aa25.78■■□□□ 1.72
SDF4-201ENST00000263741 NUDT16Q96DE0 195 aaKnown RBP25.78■■□□□ 1.72
SDF4-201ENST00000263741 COL16A1Q07092 1604 aaPredicted RBP25.77■■□□□ 1.72
SDF4-201ENST00000263741 HSPA1LP34931 641 aa25.76■■□□□ 1.71
SDF4-201ENST00000263741 PMFBP1Q8TBY8 1022 aa25.76■■□□□ 1.71
SDF4-201ENST00000263741 XPCQ01831 940 aaPredicted RBP25.73■■□□□ 1.71
SDF4-201ENST00000263741 PHF8Q9UPP1 1060 aa25.73■■□□□ 1.71
SDF4-201ENST00000263741 PPIP5K1Q6PFW1 1433 aa25.72■■□□□ 1.71
SDF4-201ENST00000263741 FOXO3O43524 673 aa25.72■■□□□ 1.71
SDF4-201ENST00000263741 MYOM1P52179 1685 aa25.69■■□□□ 1.7
SDF4-201ENST00000263741 PXDNQ92626 1479 aa25.69■■□□□ 1.7
SDF4-201ENST00000263741 CCDC61Q9Y6R9 512 aa25.68■■□□□ 1.7
SDF4-201ENST00000263741 AKAP12Q02952 1782 aa25.68■■□□□ 1.7
SDF4-201ENST00000263741 TMF1P82094 1093 aa25.68■■□□□ 1.7
SDF4-201ENST00000263741 TRPM3Q9HCF6 1732 aaPredicted RBP25.66■■□□□ 1.7
SDF4-201ENST00000263741 ATAD2Q6PL18 1390 aa25.66■■□□□ 1.7
SDF4-201ENST00000263741 CABP1Q9NZU7 370 aa25.65■■□□□ 1.7
SDF4-201ENST00000263741 NPHP3Q7Z494 1330 aa25.65■■□□□ 1.7
SDF4-201ENST00000263741 NGDNQ8NEJ9 315 aaKnown RBP25.64■■□□□ 1.7
SDF4-201ENST00000263741 ACEP12821 1306 aa25.63■■□□□ 1.69
SDF4-201ENST00000263741 POLR3GLQ9BT43 218 aa25.63■■□□□ 1.69
SDF4-201ENST00000263741 TMC1Q8TDI8 760 aa25.62■■□□□ 1.69
SDF4-201ENST00000263741 MON2Q7Z3U7 1717 aa25.61■■□□□ 1.69
SDF4-201ENST00000263741 SOS2Q07890 1332 aaPredicted RBP25.61■■□□□ 1.69
SDF4-201ENST00000263741 C11orf95C9JLR9 678 aaPredicted RBP25.61■■□□□ 1.69
SDF4-201ENST00000263741 POLR3AO14802 1390 aaPredicted RBP25.61■■□□□ 1.69
SDF4-201ENST00000263741 SHPRHQ149N8 1683 aa25.6■■□□□ 1.69
SDF4-201ENST00000263741 PLEKHG3A1L390 1219 aa25.6■■□□□ 1.69
SDF4-201ENST00000263741 PSME1Q06323 249 aa25.59■■□□□ 1.69
SDF4-201ENST00000263741 KRT28Q7Z3Y7 464 aa25.59■■□□□ 1.69
SDF4-201ENST00000263741 SLC12A5Q9H2X9 1139 aa25.59■■□□□ 1.69
SDF4-201ENST00000263741 CD163L1Q9NR16 1453 aa25.59■■□□□ 1.69
SDF4-201ENST00000263741 ALS2Q96Q42 1657 aa25.58■■□□□ 1.69
SDF4-201ENST00000263741 NRKQ7Z2Y5 1582 aa25.58■■□□□ 1.69
SDF4-201ENST00000263741 SLC24A1O60721 1099 aa25.57■■□□□ 1.68
SDF4-201ENST00000263741 USP6P35125 1406 aa25.54■■□□□ 1.68
SDF4-201ENST00000263741 PUS7Q96PZ0 661 aaKnown RBP25.54■■□□□ 1.68
SDF4-201ENST00000263741 TNS3Q68CZ2 1445 aa25.53■■□□□ 1.68
SDF4-201ENST00000263741 CDCA8Q53HL2 280 aa25.53■■□□□ 1.68
SDF4-201ENST00000263741 A0A1W2PP64 1363 aa25.53■■□□□ 1.68
SDF4-201ENST00000263741 PLEKHG5O94827 1062 aa25.52■■□□□ 1.68
SDF4-201ENST00000263741 CPSF1Q10570 1443 aaKnown RBP25.52■■□□□ 1.68
SDF4-201ENST00000263741 ABCA3Q99758 1704 aa25.52■■□□□ 1.68
SDF4-201ENST00000263741 PAK3O75914 559 aaPredicted RBP25.52■■□□□ 1.68
SDF4-201ENST00000263741 PNPLA6Q8IY17 1366 aa25.51■■□□□ 1.67
SDF4-201ENST00000263741 JCADQ9P266 1359 aa25.51■■□□□ 1.67
SDF4-201ENST00000263741 KIF7Q2M1P5 1343 aa25.51■■□□□ 1.67
SDF4-201ENST00000263741 LMOD2Q6P5Q4 547 aa25.51■■□□□ 1.67
SDF4-201ENST00000263741 LRRC59Q96AG4 307 aaKnown RBP25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms